RNA–Protein interactions for RNA: ENST00000448246.1

SP4-204, Transcript of Sp4 transcription factor, humanhuman

TSL 5

Gene SP4, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP4-204ENST00000448246 EIF4G1Q04637 1599 aaKnown RBP14.57□□□□□ -0.08
SP4-204ENST00000448246 MIER1Q8N108 512 aa14.57□□□□□ -0.08
SP4-204ENST00000448246 NCAPD3P42695 1498 aa14.54□□□□□ -0.08
SP4-204ENST00000448246 FANCD2Q9BXW9 1451 aa14.54□□□□□ -0.08
SP4-204ENST00000448246 ANP32CO43423 234 aa14.53□□□□□ -0.08
SP4-204ENST00000448246 FHAD1B1AJZ9 1412 aa14.52□□□□□ -0.09
SP4-204ENST00000448246 TRHP20396 242 aaPredicted RBP14.51□□□□□ -0.09
SP4-204ENST00000448246 CARMIL2Q6F5E8 1435 aa14.5□□□□□ -0.09
SP4-204ENST00000448246 ARID4BQ4LE39 1312 aaPredicted RBP14.49□□□□□ -0.09
SP4-204ENST00000448246 KDM2AQ9Y2K7 1162 aa14.47□□□□□ -0.09
SP4-204ENST00000448246 ERICH6Q7L0X2 663 aa14.46□□□□□ -0.09
SP4-204ENST00000448246 CLSPNQ9HAW4 1339 aa14.46□□□□□ -0.1
SP4-204ENST00000448246 JPH4Q96JJ6 628 aa14.44□□□□□ -0.1
SP4-204ENST00000448246 CCNB3Q8WWL7 1395 aa14.44□□□□□ -0.1
SP4-204ENST00000448246 NEFMP07197 916 aa14.39□□□□□ -0.11
SP4-204ENST00000448246 RGL3Q3MIN7 710 aa14.38□□□□□ -0.11
SP4-204ENST00000448246 RAPGEF2Q9Y4G8 1499 aa14.38□□□□□ -0.11
SP4-204ENST00000448246 PPP1R15AO75807 674 aaPredicted RBP14.37□□□□□ -0.11
SP4-204ENST00000448246 SENP3Q9H4L4 574 aaPredicted RBP14.37□□□□□ -0.11
SP4-204ENST00000448246 OSCARQ8IYS5 282 aa14.35□□□□□ -0.11
SP4-204ENST00000448246 FMN1Q68DA7 1419 aa14.35□□□□□ -0.11
SP4-204ENST00000448246 SLC24A1O60721 1099 aa14.34□□□□□ -0.11
SP4-204ENST00000448246 VPS8Q8N3P4 1428 aa14.34□□□□□ -0.11
SP4-204ENST00000448246 EFCAB2Q5VUJ9 269 aa14.31□□□□□ -0.12
SP4-204ENST00000448246 FGD5Q6ZNL6 1462 aa14.31□□□□□ -0.12
SP4-204ENST00000448246 DDX10Q13206 875 aaKnown RBP14.3□□□□□ -0.12
SP4-204ENST00000448246 KANK4Q5T7N3 995 aaPredicted RBP14.3□□□□□ -0.12
SP4-204ENST00000448246 CC2D2AQ9P2K1 1620 aa14.3□□□□□ -0.12
SP4-204ENST00000448246 DNAJC5BQ9UF47 199 aa14.3□□□□□ -0.12
SP4-204ENST00000448246 MLECQ14165 292 aa14.29□□□□□ -0.12
SP4-204ENST00000448246 CYB5RLQ6IPT4 315 aa14.29□□□□□ -0.12
SP4-204ENST00000448246 RAD54L2Q9Y4B4 1467 aa14.28□□□□□ -0.12
SP4-204ENST00000448246 RUSC2Q8N2Y8 1516 aa14.28□□□□□ -0.12
SP4-204ENST00000448246 GAPVD1Q14C86 1478 aa14.27□□□□□ -0.12
SP4-204ENST00000448246 FHOD3Q2V2M9 1422 aa14.27□□□□□ -0.12
SP4-204ENST00000448246 SUPT16HQ9Y5B9 1047 aaKnown RBP14.26□□□□□ -0.13
SP4-204ENST00000448246 NESP48681 1621 aa14.26□□□□□ -0.13
SP4-204ENST00000448246 IGF1RP08069 1367 aa14.26□□□□□ -0.13
SP4-204ENST00000448246 CFTRP13569 1480 aa14.25□□□□□ -0.13
SP4-204ENST00000448246 ANP32EQ9BTT0 268 aa14.25□□□□□ -0.13
SP4-204ENST00000448246 EIF4G2P78344 907 aaKnown RBP eCLIP14.24□□□□□ -0.13
SP4-204ENST00000448246 GGT6Q6P531 493 aa14.24□□□□□ -0.13
SP4-204ENST00000448246 HIRIP3Q9BW71 556 aaPredicted RBP14.24□□□□□ -0.13
SP4-204ENST00000448246 C14orf37Q86TY3 774 aa14.24□□□□□ -0.13
SP4-204ENST00000448246 PTPRGP23470 1445 aa14.23□□□□□ -0.13
SP4-204ENST00000448246 AQRO60306 1485 aaKnown RBP eCLIP14.23□□□□□ -0.132e-11■■■■■ 58.5
SP4-204ENST00000448246 BICRAQ9NZM4 1560 aa14.22□□□□□ -0.13
SP4-204ENST00000448246 FKBP8Q14318 412 aa14.22□□□□□ -0.13
SP4-204ENST00000448246 ARHGAP35Q9NRY4 1499 aa14.21□□□□□ -0.13
SP4-204ENST00000448246 DAXXQ9UER7 740 aaPredicted RBP14.2□□□□□ -0.14
SP4-204ENST00000448246 HMGXB3Q12766 1538 aa14.2□□□□□ -0.14
SP4-204ENST00000448246 KANK1Q14678 1352 aa14.18□□□□□ -0.14
SP4-204ENST00000448246 SIN3AQ96ST3 1273 aa14.18□□□□□ -0.14
SP4-204ENST00000448246 CANXP27824 592 aaKnown RBP14.16□□□□□ -0.14
SP4-204ENST00000448246 TMC1Q8TDI8 760 aa14.16□□□□□ -0.14
SP4-204ENST00000448246 HNRNPMP52272 730 aaKnown RBP eCLIP14.15□□□□□ -0.14
SP4-204ENST00000448246 CARD11Q9BXL7 1154 aa14.14□□□□□ -0.15
SP4-204ENST00000448246 FAM9BQ8IZU0 186 aa14.14□□□□□ -0.15
SP4-204ENST00000448246 PLEKHG5O94827 1062 aa14.13□□□□□ -0.15
SP4-204ENST00000448246 ZBTB47Q9UFB7 747 aaPredicted RBP14.13□□□□□ -0.15
SP4-204ENST00000448246 RSPH4AQ5TD94 716 aa14.12□□□□□ -0.15
SP4-204ENST00000448246 MRC2Q9UBG0 1479 aa14.12□□□□□ -0.15
SP4-204ENST00000448246 KIF3BO15066 747 aa14.11□□□□□ -0.15
SP4-204ENST00000448246 SPAG9O60271 1321 aaKnown RBP14.11□□□□□ -0.15
SP4-204ENST00000448246 CCDC18Q5T9S5 1454 aa14.11□□□□□ -0.15
SP4-204ENST00000448246 PKD2Q13563 968 aa14.11□□□□□ -0.15
SP4-204ENST00000448246 GRIN2BQ13224 1484 aa14.1□□□□□ -0.15
SP4-204ENST00000448246 TSHZ2Q9NRE2 1034 aa14.1□□□□□ -0.15
SP4-204ENST00000448246 POGKQ9P215 609 aa14.1□□□□□ -0.15
SP4-204ENST00000448246 HDGFP51858 240 aaKnown RBP14.1□□□□□ -0.15
SP4-204ENST00000448246 CDCA8Q53HL2 280 aa14.1□□□□□ -0.15
SP4-204ENST00000448246 DCAF11Q8TEB1 546 aa14.1□□□□□ -0.15
SP4-204ENST00000448246 SALL2Q9Y467 1007 aaPredicted RBP14.1□□□□□ -0.15
SP4-204ENST00000448246 ANKRD30AQ9BXX3 1397 aa14.1□□□□□ -0.15
SP4-204ENST00000448246 HNRNPUQ00839 825 aaKnown RBP eCLIP14.09□□□□□ -0.15
SP4-204ENST00000448246 SETD5Q9C0A6 1442 aa14.08□□□□□ -0.16
SP4-204ENST00000448246 MRS2Q9HD23 443 aa14.07□□□□□ -0.16
SP4-204ENST00000448246 NUP155O75694 1391 aa14.07□□□□□ -0.16
SP4-204ENST00000448246 BCL11AQ9H165 835 aa14.07□□□□□ -0.16
SP4-204ENST00000448246 WDR43Q15061 677 aaKnown RBP eCLIP14.07□□□□□ -0.16
SP4-204ENST00000448246 TOPBP1Q92547 1522 aa14.06□□□□□ -0.16
SP4-204ENST00000448246 FOXD1Q16676 465 aa14.04□□□□□ -0.16
SP4-204ENST00000448246 IFT140Q96RY7 1462 aa14.04□□□□□ -0.16
SP4-204ENST00000448246 ZBTB7CA1YPR0 619 aa14.04□□□□□ -0.16
SP4-204ENST00000448246 POLA1P09884 1462 aaPredicted RBP14.03□□□□□ -0.16
SP4-204ENST00000448246 MPHOSPH9Q99550 1183 aa14.02□□□□□ -0.16
SP4-204ENST00000448246 HAP1P54257 671 aaPredicted RBP14.02□□□□□ -0.17
SP4-204ENST00000448246 WASHC2CQ9Y4E1 1318 aa14.01□□□□□ -0.17
SP4-204ENST00000448246 FAM69CQ0P6D2 419 aa14.01□□□□□ -0.17
SP4-204ENST00000448246 KNSTRNQ9Y448 316 aa14.01□□□□□ -0.17
SP4-204ENST00000448246 TIMELESSQ9UNS1 1208 aa14.01□□□□□ -0.17
SP4-204ENST00000448246 LMOD2Q6P5Q4 547 aa14□□□□□ -0.17
SP4-204ENST00000448246 RAB3GAP2Q9H2M9 1393 aa13.99□□□□□ -0.17
SP4-204ENST00000448246 SYNJ1O43426 1573 aa13.98□□□□□ -0.17
SP4-204ENST00000448246 A0A0G2JS52 829 aa13.97□□□□□ -0.17
SP4-204ENST00000448246 PPM1GO15355 546 aaPredicted RBP13.96□□□□□ -0.17
SP4-204ENST00000448246 CUX1P39880 1505 aa13.96□□□□□ -0.17
SP4-204ENST00000448246 SAFB2Q14151 953 aaKnown RBP eCLIP13.95□□□□□ -0.18
SP4-204ENST00000448246 PRG4Q92954 1404 aaPredicted RBP13.95□□□□□ -0.18
SP4-204ENST00000448246 LAMC3Q9Y6N6 1575 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms