RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 MS4A3Q96HJ5 214 aa8.03□□□□□ -1.12
PMS1-216ENST00000447734 POTEMA6NI47 508 aa8.02□□□□□ -1.13
PMS1-216ENST00000447734 ASTLQ6HA08 431 aaPredicted RBP8.02□□□□□ -1.13
PMS1-216ENST00000447734 PAK3O75914 559 aaPredicted RBP8.01□□□□□ -1.13
PMS1-216ENST00000447734 ATMINO43313 823 aaPredicted RBP8□□□□□ -1.13
PMS1-216ENST00000447734 NPM1P06748 294 aaKnown RBP eCLIP7.99□□□□□ -1.13
PMS1-216ENST00000447734 LCE2DQ5TA82 110 aaPredicted RBP7.98□□□□□ -1.13
PMS1-216ENST00000447734 POTEGQ6S5H5 508 aa7.98□□□□□ -1.13
PMS1-216ENST00000447734 METRNQ9UJH8 293 aa7.98□□□□□ -1.13
PMS1-216ENST00000447734 HAP1P54257 671 aaPredicted RBP7.97□□□□□ -1.13
PMS1-216ENST00000447734 BCANQ96GW7 911 aa7.97□□□□□ -1.13
PMS1-216ENST00000447734 PROM2Q8N271 834 aa7.96□□□□□ -1.14
PMS1-216ENST00000447734 POTEFA5A3E0 1075 aa7.94□□□□□ -1.14
PMS1-216ENST00000447734 CCDC61Q9Y6R9 512 aa7.94□□□□□ -1.14
PMS1-216ENST00000447734 C7P10643 843 aa7.93□□□□□ -1.14
PMS1-216ENST00000447734 PRKCSHP14314 528 aaPredicted RBP7.93□□□□□ -1.14
PMS1-216ENST00000447734 ATN1P54259 1190 aaPredicted RBP7.93□□□□□ -1.14
PMS1-216ENST00000447734 SLC39A7Q92504 469 aa7.93□□□□□ -1.14
PMS1-216ENST00000447734 TRPC6Q9Y210 931 aa7.92□□□□□ -1.14
PMS1-216ENST00000447734 TSPYL2Q9H2G4 693 aaPredicted RBP7.9□□□□□ -1.14
PMS1-216ENST00000447734 KIF12Q96FN5 646 aa7.89□□□□□ -1.15
PMS1-216ENST00000447734 TAOK2Q9UL54 1235 aa7.89□□□□□ -1.15
PMS1-216ENST00000447734 BMP2KQ9NSY1 1161 aaPredicted RBP7.87□□□□□ -1.15
PMS1-216ENST00000447734 DCAF8L2P0C7V8 631 aa7.86□□□□□ -1.15
PMS1-216ENST00000447734 FBXO3Q9UK99 471 aa7.85□□□□□ -1.15
PMS1-216ENST00000447734 MAP3K13O43283 966 aa7.83□□□□□ -1.16
PMS1-216ENST00000447734 MAMSTRQ6ZN01 415 aa7.83□□□□□ -1.16
PMS1-216ENST00000447734 RASEFQ8IZ41 740 aa7.83□□□□□ -1.16
PMS1-216ENST00000447734 VSIG10Q8N0Z9 540 aa7.83□□□□□ -1.16
PMS1-216ENST00000447734 PCDH10Q9P2E7 1040 aa7.82□□□□□ -1.16
PMS1-216ENST00000447734 COLQQ9Y215 455 aaPredicted RBP7.81□□□□□ -1.16
PMS1-216ENST00000447734 FAM163AQ96GL9 167 aaPredicted RBP7.8□□□□□ -1.16
PMS1-216ENST00000447734 TIE1P35590 1138 aa7.79□□□□□ -1.16
PMS1-216ENST00000447734 SCUBE2Q9NQ36 999 aa7.79□□□□□ -1.16
PMS1-216ENST00000447734 TTLL13PA6NNM8 815 aa7.78□□□□□ -1.16
PMS1-216ENST00000447734 TPRNQ4KMQ1 711 aa7.77□□□□□ -1.17
PMS1-216ENST00000447734 VASPP50552 380 aaPredicted RBP7.72□□□□□ -1.17
PMS1-216ENST00000447734 MIER1Q8N108 512 aa7.72□□□□□ -1.17
PMS1-216ENST00000447734 TRIM35Q9UPQ4 493 aa7.71□□□□□ -1.18
PMS1-216ENST00000447734 NUBP1P53384 320 aa7.69□□□□□ -1.18
PMS1-216ENST00000447734 IER5LQ5T953 404 aa7.68□□□□□ -1.18
PMS1-216ENST00000447734 SEC24BO95487 1268 aa7.67□□□□□ -1.18
PMS1-216ENST00000447734 IFNL1Q8IU54 200 aa7.67□□□□□ -1.18
PMS1-216ENST00000447734 SGIP1Q9BQI5 828 aa7.67□□□□□ -1.18
PMS1-216ENST00000447734 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.67□□□□□ -1.18
PMS1-216ENST00000447734 PCDHB13Q9Y5F0 798 aa7.67□□□□□ -1.18
PMS1-216ENST00000447734 CDAN1Q8IWY9 1227 aa7.66□□□□□ -1.18
PMS1-216ENST00000447734 ST18O60284 1047 aa7.65□□□□□ -1.18
PMS1-216ENST00000447734 PKD2Q13563 968 aa7.65□□□□□ -1.18
PMS1-216ENST00000447734 IFNLR1Q8IU57 520 aaPredicted RBP7.65□□□□□ -1.18
PMS1-216ENST00000447734 KDM2AQ9Y2K7 1162 aa7.65□□□□□ -1.18
PMS1-216ENST00000447734 PLEKHG5O94827 1062 aa7.63□□□□□ -1.19
PMS1-216ENST00000447734 IRX5P78411 483 aaPredicted RBP7.62□□□□□ -1.19
PMS1-216ENST00000447734 SLAIN1Q8ND83 568 aa7.62□□□□□ -1.19
PMS1-216ENST00000447734 BBXQ8WY36 941 aaPredicted RBP7.62□□□□□ -1.19
PMS1-216ENST00000447734 PLCD3Q8N3E9 789 aa7.61□□□□□ -1.19
PMS1-216ENST00000447734 PAXIP1Q6ZW49 1069 aaPredicted RBP7.6□□□□□ -1.19
PMS1-216ENST00000447734 CFAP44Q96MT7 982 aa7.6□□□□□ -1.19
PMS1-216ENST00000447734 TMEM106CQ9BVX2 250 aa7.6□□□□□ -1.19
PMS1-216ENST00000447734 PLCG2P16885 1265 aa7.55□□□□□ -1.2
PMS1-216ENST00000447734 TIMELESSQ9UNS1 1208 aa7.55□□□□□ -1.2
PMS1-216ENST00000447734 FAM212AQ96EL1 285 aa7.54□□□□□ -1.2
PMS1-216ENST00000447734 ZBTB47Q9UFB7 747 aaPredicted RBP7.53□□□□□ -1.2
PMS1-216ENST00000447734 TULP1O00294 542 aaPredicted RBP7.52□□□□□ -1.21
PMS1-216ENST00000447734 ECM2O94769 699 aaPredicted RBP7.51□□□□□ -1.21
PMS1-216ENST00000447734 PYGBP11216 843 aa7.51□□□□□ -1.21
PMS1-216ENST00000447734 MMRN1Q13201 1228 aa7.51□□□□□ -1.21
PMS1-216ENST00000447734 SPNS2Q8IVW8 549 aa7.51□□□□□ -1.21
PMS1-216ENST00000447734 OCEL1Q9H607 264 aa7.51□□□□□ -1.21
PMS1-216ENST00000447734 PCDHB8Q9UN66 801 aa7.5□□□□□ -1.21
PMS1-216ENST00000447734 NBR1Q14596 966 aa7.49□□□□□ -1.21
PMS1-216ENST00000447734 SPRYD3Q8NCJ5 442 aa7.49□□□□□ -1.21
PMS1-216ENST00000447734 DAXXQ9UER7 740 aaPredicted RBP7.49□□□□□ -1.21
PMS1-216ENST00000447734 PDCD7Q8N8D1 485 aaKnown RBP7.48□□□□□ -1.21
PMS1-216ENST00000447734 MARVELD3Q96A59 401 aa7.48□□□□□ -1.21
PMS1-216ENST00000447734 TMEM121BQ9BXQ6 578 aaPredicted RBP7.48□□□□□ -1.21
PMS1-216ENST00000447734 TSHZ2Q9NRE2 1034 aa7.48□□□□□ -1.21
PMS1-216ENST00000447734 KLHL34Q8N239 644 aa7.47□□□□□ -1.21
PMS1-216ENST00000447734 SPOCK2Q92563 424 aa7.47□□□□□ -1.21
PMS1-216ENST00000447734 ARXQ96QS3 562 aa7.47□□□□□ -1.21
PMS1-216ENST00000447734 POTEB3A0JP26 581 aa7.45□□□□□ -1.22
PMS1-216ENST00000447734 DCAF8Q5TAQ9 597 aa7.45□□□□□ -1.22
PMS1-216ENST00000447734 POTEBQ6S5H4 581 aa7.45□□□□□ -1.22
PMS1-216ENST00000447734 ERICH6Q7L0X2 663 aa7.45□□□□□ -1.22
PMS1-216ENST00000447734 GTF3C3Q9Y5Q9 886 aa7.45□□□□□ -1.22
PMS1-216ENST00000447734 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.44□□□□□ -1.22
PMS1-216ENST00000447734 KRTAP3-3Q9BYR6 98 aa7.42□□□□□ -1.22
PMS1-216ENST00000447734 KRTAP3-2Q9BYR7 98 aa7.42□□□□□ -1.22
PMS1-216ENST00000447734 SNPHO15079 494 aa7.4□□□□□ -1.22
PMS1-216ENST00000447734 RGL2O15211 777 aa7.4□□□□□ -1.22
PMS1-216ENST00000447734 ILDR1Q86SU0 546 aaPredicted RBP7.38□□□□□ -1.23
PMS1-216ENST00000447734 HS3ST6Q96QI5 342 aa7.36□□□□□ -1.23
PMS1-216ENST00000447734 DNAJC5Q9H3Z4 198 aa7.36□□□□□ -1.23
PMS1-216ENST00000447734 CHGAP10645 457 aaKnown RBP7.35□□□□□ -1.23
PMS1-216ENST00000447734 EMP3P54852 163 aa7.35□□□□□ -1.23
PMS1-216ENST00000447734 DPY19L2Q6NUT2 758 aa7.34□□□□□ -1.23
PMS1-216ENST00000447734 C3orf67Q6ZVT6 689 aa7.34□□□□□ -1.23
PMS1-216ENST00000447734 ZNF467Q7Z7K2 595 aaPredicted RBP7.34□□□□□ -1.23
PMS1-216ENST00000447734 CHRM1P11229 460 aaPredicted RBP7.33□□□□□ -1.24
PMS1-216ENST00000447734 FAM205CA6NFA0 338 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms