RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 CHRM1P11229 460 aaPredicted RBP10.56□□□□□ -0.72
HMGB1P16-201ENST00000447155 HAP1P54257 671 aaPredicted RBP10.56□□□□□ -0.72
HMGB1P16-201ENST00000447155 RNF25Q96BH1 459 aaPredicted RBP10.56□□□□□ -0.72
HMGB1P16-201ENST00000447155 TAOK2Q9UL54 1235 aa10.56□□□□□ -0.72
HMGB1P16-201ENST00000447155 RIOK3O14730 519 aaKnown RBP10.54□□□□□ -0.72
HMGB1P16-201ENST00000447155 FARP1Q9Y4F1 1045 aaPredicted RBP10.53□□□□□ -0.72
HMGB1P16-201ENST00000447155 PRKAR2AP13861 404 aaKnown RBP10.52□□□□□ -0.73
HMGB1P16-201ENST00000447155 FXR2P51116 673 aaKnown RBP eCLIP10.52□□□□□ -0.73
HMGB1P16-201ENST00000447155 PAXIP1Q6ZW49 1069 aaPredicted RBP10.52□□□□□ -0.73
HMGB1P16-201ENST00000447155 HS6ST3Q8IZP7 471 aa10.52□□□□□ -0.73
HMGB1P16-201ENST00000447155 SPRYD3Q8NCJ5 442 aa10.49□□□□□ -0.73
HMGB1P16-201ENST00000447155 CFAP44Q96MT7 982 aa10.49□□□□□ -0.73
HMGB1P16-201ENST00000447155 VGFO15240 615 aaPredicted RBP10.48□□□□□ -0.73
HMGB1P16-201ENST00000447155 PYGBP11216 843 aa10.47□□□□□ -0.73
HMGB1P16-201ENST00000447155 CHRDL2Q6WN34 429 aa10.47□□□□□ -0.73
HMGB1P16-201ENST00000447155 DNAJC5Q9H3Z4 198 aa10.47□□□□□ -0.73
HMGB1P16-201ENST00000447155 VSIG10Q8N0Z9 540 aa10.45□□□□□ -0.74
HMGB1P16-201ENST00000447155 TSPYL2Q9H2G4 693 aaPredicted RBP10.45□□□□□ -0.74
HMGB1P16-201ENST00000447155 SGIP1Q9BQI5 828 aa10.43□□□□□ -0.74
HMGB1P16-201ENST00000447155 PIP4P2Q8N4L2 257 aa10.42□□□□□ -0.74
HMGB1P16-201ENST00000447155 STK25O00506 426 aa10.41□□□□□ -0.74
HMGB1P16-201ENST00000447155 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.38□□□□□ -0.75
HMGB1P16-201ENST00000447155 ZFP91Q96JP5 570 aaPredicted RBP10.38□□□□□ -0.75
HMGB1P16-201ENST00000447155 PAK3O75914 559 aaPredicted RBP10.37□□□□□ -0.75
HMGB1P16-201ENST00000447155 ZNF467Q7Z7K2 595 aaPredicted RBP10.37□□□□□ -0.75
HMGB1P16-201ENST00000447155 CCDC61Q9Y6R9 512 aa10.37□□□□□ -0.75
HMGB1P16-201ENST00000447155 NKX1-1Q15270 411 aaPredicted RBP10.35□□□□□ -0.75
HMGB1P16-201ENST00000447155 BCL11BQ9C0K0 894 aaPredicted RBP10.35□□□□□ -0.75
HMGB1P16-201ENST00000447155 STK24Q9Y6E0 443 aa10.34□□□□□ -0.75
HMGB1P16-201ENST00000447155 TSHZ2Q9NRE2 1034 aa10.33□□□□□ -0.76
HMGB1P16-201ENST00000447155 POTEHQ6S545 545 aa10.31□□□□□ -0.76
HMGB1P16-201ENST00000447155 GTPBP6O43824 516 aaPredicted RBP10.3□□□□□ -0.76
HMGB1P16-201ENST00000447155 PDAP1Q13442 181 aaKnown RBP10.3□□□□□ -0.76
HMGB1P16-201ENST00000447155 ZNF579Q8NAF0 562 aaKnown RBP10.3□□□□□ -0.76
HMGB1P16-201ENST00000447155 KDM2AQ9Y2K7 1162 aa10.3□□□□□ -0.76
HMGB1P16-201ENST00000447155 RYDENQ9NUL5 291 aaKnown RBP10.29□□□□□ -0.76
HMGB1P16-201ENST00000447155 PCDHB8Q9UN66 801 aa10.28□□□□□ -0.76
HMGB1P16-201ENST00000447155 PCDHB13Q9Y5F0 798 aa10.28□□□□□ -0.76
HMGB1P16-201ENST00000447155 KIF12Q96FN5 646 aa10.25□□□□□ -0.77
HMGB1P16-201ENST00000447155 CD44P16070 742 aaKnown RBP10.24□□□□□ -0.77
HMGB1P16-201ENST00000447155 PSEN1P49768 467 aa10.24□□□□□ -0.77
HMGB1P16-201ENST00000447155 MAP3K13O43283 966 aa10.23□□□□□ -0.77
HMGB1P16-201ENST00000447155 ZRANB1Q9UGI0 708 aa10.23□□□□□ -0.77
HMGB1P16-201ENST00000447155 IFNL1Q8IU54 200 aa10.22□□□□□ -0.77
HMGB1P16-201ENST00000447155 BCANQ96GW7 911 aa10.22□□□□□ -0.77
HMGB1P16-201ENST00000447155 PHF12Q96QT6 1004 aa10.16□□□□□ -0.78
HMGB1P16-201ENST00000447155 C19orf67A6NJJ6 358 aa10.15□□□□□ -0.78
HMGB1P16-201ENST00000447155 MFRPQ9BY79 579 aa10.1□□□□□ -0.79
HMGB1P16-201ENST00000447155 CABP2Q9NPB3 220 aa10.1□□□□□ -0.79
HMGB1P16-201ENST00000447155 SOX12O15370 315 aa10.08□□□□□ -0.8
HMGB1P16-201ENST00000447155 EFCAB3Q8N7B9 438 aa10.08□□□□□ -0.8
HMGB1P16-201ENST00000447155 NLRP6P59044 892 aa10.07□□□□□ -0.8
HMGB1P16-201ENST00000447155 MS4A3Q96HJ5 214 aa10.06□□□□□ -0.8
HMGB1P16-201ENST00000447155 FBXO22Q8NEZ5 403 aa10.04□□□□□ -0.8
HMGB1P16-201ENST00000447155 TMEM106CQ9BVX2 250 aa10.03□□□□□ -0.8
HMGB1P16-201ENST00000447155 PHF8Q9UPP1 1060 aa10.02□□□□□ -0.81
HMGB1P16-201ENST00000447155 GOLGA2Q08379 1002 aa10.01□□□□□ -0.81
HMGB1P16-201ENST00000447155 NBR1Q14596 966 aa10□□□□□ -0.81
HMGB1P16-201ENST00000447155 TRPC6Q9Y210 931 aa10□□□□□ -0.81
HMGB1P16-201ENST00000447155 TIE1P35590 1138 aa9.99□□□□□ -0.81
HMGB1P16-201ENST00000447155 HAX1O00165 279 aa9.98□□□□□ -0.81
HMGB1P16-201ENST00000447155 CLCN6P51797 869 aa9.98□□□□□ -0.81
HMGB1P16-201ENST00000447155 CADPS2Q86UW7 1296 aa9.98□□□□□ -0.81
HMGB1P16-201ENST00000447155 PPP1R37O75864 691 aa9.97□□□□□ -0.81
HMGB1P16-201ENST00000447155 TTLL13PA6NNM8 815 aa9.95□□□□□ -0.82
HMGB1P16-201ENST00000447155 MKRN3Q13064 507 aaKnown RBP9.95□□□□□ -0.82
HMGB1P16-201ENST00000447155 WDR70Q9NW82 654 aa9.95□□□□□ -0.82
HMGB1P16-201ENST00000447155 MS4A4AQ96JQ5 239 aa9.94□□□□□ -0.82
HMGB1P16-201ENST00000447155 P3H3Q8IVL6 736 aa9.93□□□□□ -0.82
HMGB1P16-201ENST00000447155 GALR2O43603 387 aaPredicted RBP9.92□□□□□ -0.82
HMGB1P16-201ENST00000447155 BMP2KQ9NSY1 1161 aaPredicted RBP9.92□□□□□ -0.82
HMGB1P16-201ENST00000447155 EVX2Q03828 476 aa9.9□□□□□ -0.82
HMGB1P16-201ENST00000447155 ILDR1Q86SU0 546 aaPredicted RBP9.87□□□□□ -0.83
HMGB1P16-201ENST00000447155 TRIM35Q9UPQ4 493 aa9.87□□□□□ -0.83
HMGB1P16-201ENST00000447155 PRKCSHP14314 528 aaPredicted RBP9.86□□□□□ -0.83
HMGB1P16-201ENST00000447155 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.86□□□□□ -0.83
HMGB1P16-201ENST00000447155 TPRNQ4KMQ1 711 aa9.85□□□□□ -0.83
HMGB1P16-201ENST00000447155 KCNV2Q8TDN2 545 aa9.84□□□□□ -0.83
HMGB1P16-201ENST00000447155 PDE4AP27815 886 aa9.83□□□□□ -0.84
HMGB1P16-201ENST00000447155 NCKAP5LQ9HCH0 1330 aa9.82□□□□□ -0.84
HMGB1P16-201ENST00000447155 ATMINO43313 823 aaPredicted RBP9.81□□□□□ -0.84
HMGB1P16-201ENST00000447155 ATN1P54259 1190 aaPredicted RBP9.81□□□□□ -0.84
HMGB1P16-201ENST00000447155 E2F4Q16254 413 aa9.8□□□□□ -0.84
HMGB1P16-201ENST00000447155 ASTLQ6HA08 431 aaPredicted RBP9.8□□□□□ -0.84
HMGB1P16-201ENST00000447155 LARP6Q9BRS8 491 aaKnown RBP9.8□□□□□ -0.84
HMGB1P16-201ENST00000447155 CRISPLD2Q9H0B8 497 aa9.8□□□□□ -0.84
HMGB1P16-201ENST00000447155 MFSD10Q14728 455 aa9.79□□□□□ -0.84
HMGB1P16-201ENST00000447155 IER5LQ5T953 404 aa9.78□□□□□ -0.84
HMGB1P16-201ENST00000447155 ARHGEF1Q92888 912 aaKnown RBP9.78□□□□□ -0.84
HMGB1P16-201ENST00000447155 GABBR2O75899 941 aa9.76□□□□□ -0.85
HMGB1P16-201ENST00000447155 IRX5P78411 483 aaPredicted RBP9.75□□□□□ -0.85
HMGB1P16-201ENST00000447155 PDCD7Q8N8D1 485 aaKnown RBP9.75□□□□□ -0.85
HMGB1P16-201ENST00000447155 DDX27Q96GQ7 796 aaKnown RBP9.75□□□□□ -0.85
HMGB1P16-201ENST00000447155 DPY19L2Q6NUT2 758 aa9.74□□□□□ -0.85
HMGB1P16-201ENST00000447155 OCEL1Q9H607 264 aa9.74□□□□□ -0.85
HMGB1P16-201ENST00000447155 MICALL2Q8IY33 904 aa9.73□□□□□ -0.85
HMGB1P16-201ENST00000447155 DCBLD2Q96PD2 775 aa9.7□□□□□ -0.86
HMGB1P16-201ENST00000447155 GPHNQ9NQX3 736 aaPredicted RBP9.7□□□□□ -0.86
HMGB1P16-201ENST00000447155 PLCG2P16885 1265 aa9.69□□□□□ -0.86
HMGB1P16-201ENST00000447155 CAMK2BQ13554 666 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms