RNA–Protein interactions for RNA: ENST00000445561.5

TRO-215, Transcript of trophinin, humanhuman

TSL 1 (best)

Gene TRO, Length 2,597 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-215ENST00000445561 LRRC9Q6ZRR7 1453 aa18.43■□□□□ 0.54
TRO-215ENST00000445561 RAB3GAP2Q9H2M9 1393 aa18.42■□□□□ 0.54
TRO-215ENST00000445561 PHLDB1Q86UU1 1377 aa18.42■□□□□ 0.54
TRO-215ENST00000445561 POLA1P09884 1462 aaPredicted RBP18.41■□□□□ 0.54
TRO-215ENST00000445561 MAP3K1Q13233 1512 aa18.41■□□□□ 0.54
TRO-215ENST00000445561 DNMBPQ6XZF7 1577 aa18.41■□□□□ 0.54
TRO-215ENST00000445561 TOPBP1Q92547 1522 aa18.4■□□□□ 0.54
TRO-215ENST00000445561 FHOD3Q2V2M9 1422 aa18.39■□□□□ 0.53
TRO-215ENST00000445561 FHAD1B1AJZ9 1412 aa18.39■□□□□ 0.53
TRO-215ENST00000445561 PCF11O94913 1555 aaKnown RBP18.38■□□□□ 0.53
TRO-215ENST00000445561 ABCA10Q8WWZ4 1543 aa18.38■□□□□ 0.53
TRO-215ENST00000445561 FAM50AQ14320 339 aaKnown RBP18.38■□□□□ 0.53
TRO-215ENST00000445561 MAPKBP1O60336 1514 aa18.32■□□□□ 0.52
TRO-215ENST00000445561 SETD5Q9C0A6 1442 aa18.32■□□□□ 0.52
TRO-215ENST00000445561 CFAP43Q8NDM7 1665 aa18.31■□□□□ 0.52
TRO-215ENST00000445561 URB2Q14146 1524 aaKnown RBP18.27■□□□□ 0.52
TRO-215ENST00000445561 FYCO1Q9BQS8 1478 aa18.26■□□□□ 0.51
TRO-215ENST00000445561 TDRD9Q8NDG6 1382 aaKnown RBP18.26■□□□□ 0.51
TRO-215ENST00000445561 CUL7Q14999 1698 aa18.26■□□□□ 0.51
TRO-215ENST00000445561 CASKIN1Q8WXD9 1431 aa18.25■□□□□ 0.51
TRO-215ENST00000445561 EFCAB5A4FU69 1503 aa18.25■□□□□ 0.51
TRO-215ENST00000445561 SIN3AQ96ST3 1273 aa18.25■□□□□ 0.51
TRO-215ENST00000445561 DNAJC5BQ9UF47 199 aa18.24■□□□□ 0.51
TRO-215ENST00000445561 CTTNBP2Q8WZ74 1663 aa18.22■□□□□ 0.51
TRO-215ENST00000445561 LAMC3Q9Y6N6 1575 aa18.2■□□□□ 0.5
TRO-215ENST00000445561 AQRO60306 1485 aaKnown RBP eCLIP18.2■□□□□ 0.5
TRO-215ENST00000445561 WDR97A6NE52 1622 aa18.18■□□□□ 0.5
TRO-215ENST00000445561 FMN1Q68DA7 1419 aa18.18■□□□□ 0.5
TRO-215ENST00000445561 SNAPC4Q5SXM2 1469 aa18.16■□□□□ 0.5
TRO-215ENST00000445561 GAPVD1Q14C86 1478 aa18.16■□□□□ 0.5
TRO-215ENST00000445561 ABCA5Q8WWZ7 1642 aa18.14■□□□□ 0.49
TRO-215ENST00000445561 MTUS2Q5JR59 1369 aa18.14■□□□□ 0.49
TRO-215ENST00000445561 FGD6Q6ZV73 1430 aa18.13■□□□□ 0.49
TRO-215ENST00000445561 PDS5BQ9NTI5 1447 aa18.12■□□□□ 0.49
TRO-215ENST00000445561 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.11■□□□□ 0.49
TRO-215ENST00000445561 KCNH8Q96L42 1107 aa18.1■□□□□ 0.49
TRO-215ENST00000445561 SAMD9Q5K651 1589 aa18.09■□□□□ 0.49
TRO-215ENST00000445561 PTPRKQ15262 1439 aa18.08■□□□□ 0.48
TRO-215ENST00000445561 LRRIQ1Q96JM4 1722 aa18.07■□□□□ 0.48
TRO-215ENST00000445561 HIRIP3Q9BW71 556 aaPredicted RBP18.07■□□□□ 0.48
TRO-215ENST00000445561 KIF21AQ7Z4S6 1674 aa18.06■□□□□ 0.48
TRO-215ENST00000445561 DDX10Q13206 875 aaKnown RBP18.06■□□□□ 0.48
TRO-215ENST00000445561 GRIN2BQ13224 1484 aa18.05■□□□□ 0.48
TRO-215ENST00000445561 NCOA2Q15596 1464 aa18.04■□□□□ 0.48
TRO-215ENST00000445561 CCDC18Q5T9S5 1454 aa18.03■□□□□ 0.48
TRO-215ENST00000445561 PPP1R15AO75807 674 aaPredicted RBP18.02■□□□□ 0.48
TRO-215ENST00000445561 TIMELESSQ9UNS1 1208 aa18.02■□□□□ 0.47
TRO-215ENST00000445561 MYOM3Q5VTT5 1437 aa18.01■□□□□ 0.47
TRO-215ENST00000445561 HFM1A2PYH4 1435 aa18■□□□□ 0.47
TRO-215ENST00000445561 TARBP1Q13395 1621 aaKnown RBP18■□□□□ 0.47
TRO-215ENST00000445561 PTPN23Q9H3S7 1636 aa17.98■□□□□ 0.47
TRO-215ENST00000445561 SUPT16HQ9Y5B9 1047 aaKnown RBP17.97■□□□□ 0.47
TRO-215ENST00000445561 MAGI3Q5TCQ9 1506 aa17.97■□□□□ 0.47
TRO-215ENST00000445561 NAIPQ13075 1403 aa17.96■□□□□ 0.47
TRO-215ENST00000445561 SUPT6HQ7KZ85 1726 aaKnown RBP17.96■□□□□ 0.47
TRO-215ENST00000445561 TONSLQ96HA7 1378 aa17.96■□□□□ 0.47
TRO-215ENST00000445561 UACAQ9BZF9 1416 aa17.96■□□□□ 0.47
TRO-215ENST00000445561 ARID3CA6NKF2 412 aa17.96■□□□□ 0.47
TRO-215ENST00000445561 EHBP1L1Q8N3D4 1523 aa17.96■□□□□ 0.47
TRO-215ENST00000445561 THOC2Q8NI27 1593 aaKnown RBP17.95■□□□□ 0.46
TRO-215ENST00000445561 CHIC2Q9UKJ5 165 aa17.94■□□□□ 0.46
TRO-215ENST00000445561 RRP7BPQ9NSQ0 103 aa17.93■□□□□ 0.46
TRO-215ENST00000445561 UGGT2Q9NYU1 1516 aa17.93■□□□□ 0.46
TRO-215ENST00000445561 PBRM1Q86U86 1689 aa17.91■□□□□ 0.46
TRO-215ENST00000445561 ARHGEF11O15085 1522 aa17.9■□□□□ 0.46
TRO-215ENST00000445561 IQGAP2Q13576 1575 aa17.89■□□□□ 0.45
TRO-215ENST00000445561 CDK13Q14004 1512 aaKnown RBP17.88■□□□□ 0.45
TRO-215ENST00000445561 EPRSP07814 1512 aaKnown RBP17.87■□□□□ 0.45
TRO-215ENST00000445561 ADAMTS12P58397 1594 aa17.87■□□□□ 0.45
TRO-215ENST00000445561 HECW1Q76N89 1606 aa17.86■□□□□ 0.45
TRO-215ENST00000445561 MRC2Q9UBG0 1479 aa17.84■□□□□ 0.45
TRO-215ENST00000445561 TRIM52Q96A61 297 aa17.84■□□□□ 0.45
TRO-215ENST00000445561 TCOF1Q13428 1488 aaKnown RBP17.83■□□□□ 0.44
TRO-215ENST00000445561 ZNF608Q9ULD9 1512 aaPredicted RBP17.83■□□□□ 0.44
TRO-215ENST00000445561 ANP32CO43423 234 aa17.83■□□□□ 0.44
TRO-215ENST00000445561 WDR62O43379 1518 aa17.8■□□□□ 0.44
TRO-215ENST00000445561 KDM6BO15054 1643 aa17.8■□□□□ 0.44
TRO-215ENST00000445561 KDM5BQ9UGL1 1544 aa17.8■□□□□ 0.44
TRO-215ENST00000445561 DENND4BO75064 1496 aaPredicted RBP17.79■□□□□ 0.44
TRO-215ENST00000445561 FOXD1Q16676 465 aa17.77■□□□□ 0.43
TRO-215ENST00000445561 CCER2I3L3R5 266 aa17.76■□□□□ 0.43
TRO-215ENST00000445561 GCC2Q8IWJ2 1684 aa17.76■□□□□ 0.43
TRO-215ENST00000445561 MIA2Q96PC5 1412 aa17.75■□□□□ 0.43
TRO-215ENST00000445561 BCANQ96GW7 911 aa17.74■□□□□ 0.43
TRO-215ENST00000445561 MPHOSPH9Q99550 1183 aa17.74■□□□□ 0.43
TRO-215ENST00000445561 IFT140Q96RY7 1462 aa17.73■□□□□ 0.43
TRO-215ENST00000445561 ZNF644Q9H582 1327 aaPredicted RBP17.72■□□□□ 0.43
TRO-215ENST00000445561 DISP1Q96F81 1524 aa17.72■□□□□ 0.43
TRO-215ENST00000445561 AKNAQ7Z591 1439 aa17.72■□□□□ 0.43
TRO-215ENST00000445561 HSPA5P11021 654 aaKnown RBP17.71■□□□□ 0.43
TRO-215ENST00000445561 FKBP8Q14318 412 aa17.71■□□□□ 0.43
TRO-215ENST00000445561 KIAA0586Q9BVV6 1533 aa17.7■□□□□ 0.42
TRO-215ENST00000445561 KIAA0556O60303 1618 aa17.7■□□□□ 0.42
TRO-215ENST00000445561 NUP153P49790 1475 aaKnown RBP17.69■□□□□ 0.42
TRO-215ENST00000445561 DAPK1P53355 1430 aa17.68■□□□□ 0.42
TRO-215ENST00000445561 WASHC2AQ641Q2 1341 aa17.68■□□□□ 0.42
TRO-215ENST00000445561 L3MBTL2Q969R5 705 aa17.68■□□□□ 0.42
TRO-215ENST00000445561 GRIN2AQ12879 1464 aa17.66■□□□□ 0.42
TRO-215ENST00000445561 ABCC5O15440 1437 aa17.65■□□□□ 0.42
TRO-215ENST00000445561 TSHZ2Q9NRE2 1034 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms