RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 PLPPR3Q6T4P5 718 aa24.76■■□□□ 1.55
SHANK3-203ENST00000445220 BECN1Q14457 450 aa24.76■■□□□ 1.55
SHANK3-203ENST00000445220 SLC24A1O60721 1099 aa24.74■■□□□ 1.55
SHANK3-203ENST00000445220 MTUS2Q5JR59 1369 aa24.7■■□□□ 1.55
SHANK3-203ENST00000445220 RTN4Q9NQC3 1192 aaKnown RBP24.7■■□□□ 1.54
SHANK3-203ENST00000445220 GOLGA3Q08378 1498 aa24.67■■□□□ 1.54
SHANK3-203ENST00000445220 NOP58Q9Y2X3 529 aaKnown RBP24.66■■□□□ 1.54
SHANK3-203ENST00000445220 SUPT16HQ9Y5B9 1047 aaKnown RBP24.66■■□□□ 1.54
SHANK3-203ENST00000445220 NAP1L5Q96NT1 182 aaPredicted RBP24.63■■□□□ 1.53
SHANK3-203ENST00000445220 TSPY4P0CV99 314 aa24.62■■□□□ 1.53
SHANK3-203ENST00000445220 TSPY10P0CW01 314 aa24.62■■□□□ 1.53
SHANK3-203ENST00000445220 CHIC2Q9UKJ5 165 aa24.6■■□□□ 1.53
SHANK3-203ENST00000445220 GOLGA6L22H0YM25 854 aa24.58■■□□□ 1.53
SHANK3-203ENST00000445220 WRNQ14191 1432 aaPredicted RBP eCLIP24.57■■□□□ 1.52
SHANK3-203ENST00000445220 WDR43Q15061 677 aaKnown RBP eCLIP24.57■■□□□ 1.52
SHANK3-203ENST00000445220 CEP162Q5TB80 1403 aa24.56■■□□□ 1.52
SHANK3-203ENST00000445220 DEKP35659 375 aaKnown RBP24.56■■□□□ 1.52
SHANK3-203ENST00000445220 PPP4R2Q9NY27 417 aa24.55■■□□□ 1.52
SHANK3-203ENST00000445220 CHGAP10645 457 aaKnown RBP24.55■■□□□ 1.52
SHANK3-203ENST00000445220 STAG3Q9UJ98 1225 aa24.52■■□□□ 1.52
SHANK3-203ENST00000445220 LAS1LQ9Y4W2 734 aaKnown RBP24.52■■□□□ 1.52
SHANK3-203ENST00000445220 BAZ1BQ9UIG0 1483 aaKnown RBP24.51■■□□□ 1.51
SHANK3-203ENST00000445220 CECR2Q9BXF3 1484 aa24.5■■□□□ 1.51
SHANK3-203ENST00000445220 TNIKQ9UKE5 1360 aa24.48■■□□□ 1.51
SHANK3-203ENST00000445220 HIRIP3Q9BW71 556 aaPredicted RBP24.48■■□□□ 1.51
SHANK3-203ENST00000445220 NCLP19338 710 aaKnown RBP24.47■■□□□ 1.51
SHANK3-203ENST00000445220 MYO15BQ96JP2 1530 aa24.47■■□□□ 1.51
SHANK3-203ENST00000445220 EIF4G2P78344 907 aaKnown RBP eCLIP24.46■■□□□ 1.51
SHANK3-203ENST00000445220 KIF27Q86VH2 1401 aa24.46■■□□□ 1.51
SHANK3-203ENST00000445220 CEP164Q9UPV0 1460 aa24.45■■□□□ 1.51
SHANK3-203ENST00000445220 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.44■■□□□ 1.51e-6■□□□□ 9.5
SHANK3-203ENST00000445220 PTMAP06454 111 aaKnown RBP24.43■■□□□ 1.5
SHANK3-203ENST00000445220 RBM19Q9Y4C8 960 aaKnown RBP24.41■■□□□ 1.5
SHANK3-203ENST00000445220 BAZ1AQ9NRL2 1556 aaPredicted RBP24.41■■□□□ 1.5
SHANK3-203ENST00000445220 DNTTIP2Q5QJE6 756 aaKnown RBP24.4■■□□□ 1.5
SHANK3-203ENST00000445220 MYH16Q9H6N6 1097 aa24.37■■□□□ 1.49
SHANK3-203ENST00000445220 CDK11BP21127 795 aaKnown RBP24.33■■□□□ 1.49
SHANK3-203ENST00000445220 PLEKHD1A6NEE1 506 aa24.32■■□□□ 1.48
SHANK3-203ENST00000445220 KDM2AQ9Y2K7 1162 aa24.31■■□□□ 1.48
SHANK3-203ENST00000445220 RRP7BPQ9NSQ0 103 aa24.3■■□□□ 1.48
SHANK3-203ENST00000445220 L1TD1Q5T7N2 865 aaKnown RBP24.27■■□□□ 1.48
SHANK3-203ENST00000445220 B4GALNT3Q6L9W6 998 aa24.24■■□□□ 1.47
SHANK3-203ENST00000445220 AEBP2Q6ZN18 517 aaPredicted RBP24.23■■□□□ 1.47
SHANK3-203ENST00000445220 ARID4BQ4LE39 1312 aaPredicted RBP24.23■■□□□ 1.47
SHANK3-203ENST00000445220 PDS5BQ9NTI5 1447 aa24.21■■□□□ 1.47
SHANK3-203ENST00000445220 TSHZ2Q9NRE2 1034 aa24.17■■□□□ 1.46
SHANK3-203ENST00000445220 KCNH8Q96L42 1107 aa24.17■■□□□ 1.46
SHANK3-203ENST00000445220 CFDP1Q9UEE9 299 aaPredicted RBP24.15■■□□□ 1.46
SHANK3-203ENST00000445220 RGS3P49796 1198 aa24.14■■□□□ 1.45
SHANK3-203ENST00000445220 FHAD1B1AJZ9 1412 aa24.12■■□□□ 1.45
SHANK3-203ENST00000445220 MSNP26038 577 aaKnown RBP24.1■■□□□ 1.45
SHANK3-203ENST00000445220 CDCA8Q53HL2 280 aa24.09■■□□□ 1.45
SHANK3-203ENST00000445220 ZRSR1Q15695 479 aaKnown RBP24.08■■□□□ 1.45
SHANK3-203ENST00000445220 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.08■■□□□ 1.45
SHANK3-203ENST00000445220 CCER2I3L3R5 266 aa24.07■■□□□ 1.44
SHANK3-203ENST00000445220 CASC1Q6TDU7 716 aa24.07■■□□□ 1.44
SHANK3-203ENST00000445220 SENP3-EIF4A1A0A087X0R7 540 aa24.05■■□□□ 1.44
SHANK3-203ENST00000445220 PNNQ9H307 717 aaKnown RBP24.03■■□□□ 1.44
SHANK3-203ENST00000445220 CHAF1AQ13111 956 aaPredicted RBP24.03■■□□□ 1.44
SHANK3-203ENST00000445220 HSP90AB1P08238 724 aaKnown RBP24.03■■□□□ 1.44
SHANK3-203ENST00000445220 PLCB2Q00722 1185 aa24■■□□□ 1.43
SHANK3-203ENST00000445220 FTSJ3Q8IY81 847 aaKnown RBP24■■□□□ 1.43
SHANK3-203ENST00000445220 CCNB3Q8WWL7 1395 aa24■■□□□ 1.43
SHANK3-203ENST00000445220 CARMIL1Q5VZK9 1371 aa24■■□□□ 1.43
SHANK3-203ENST00000445220 OSCARQ8IYS5 282 aa23.98■■□□□ 1.43
SHANK3-203ENST00000445220 TIMELESSQ9UNS1 1208 aa23.97■■□□□ 1.43
SHANK3-203ENST00000445220 RGL3Q3MIN7 710 aa23.96■■□□□ 1.43
SHANK3-203ENST00000445220 HSCBQ8IWL3 235 aa23.96■■□□□ 1.43
SHANK3-203ENST00000445220 CUX2O14529 1486 aa23.95■■□□□ 1.42
SHANK3-203ENST00000445220 CARD11Q9BXL7 1154 aa23.95■■□□□ 1.42
SHANK3-203ENST00000445220 PPP1R15AO75807 674 aaPredicted RBP23.94■■□□□ 1.42
SHANK3-203ENST00000445220 CFAP53Q96M91 514 aa23.94■■□□□ 1.42
SHANK3-203ENST00000445220 GOLGA6L6A8MZA4 724 aa23.93■■□□□ 1.42
SHANK3-203ENST00000445220 SOGA1O94964 1423 aa23.93■■□□□ 1.42
SHANK3-203ENST00000445220 KNSTRNQ9Y448 316 aa23.92■■□□□ 1.42
SHANK3-203ENST00000445220 TPRNQ4KMQ1 711 aa23.92■■□□□ 1.42
SHANK3-203ENST00000445220 NRDCO43847 1150 aa23.91■■□□□ 1.42
SHANK3-203ENST00000445220 VPS8Q8N3P4 1428 aa23.89■■□□□ 1.41
SHANK3-203ENST00000445220 CYB5RLQ6IPT4 315 aa23.89■■□□□ 1.41
SHANK3-203ENST00000445220 IPO9Q96P70 1041 aaKnown RBP23.89■■□□□ 1.41
SHANK3-203ENST00000445220 MROH2BQ7Z745 1585 aa23.87■■□□□ 1.41
SHANK3-203ENST00000445220 CCDC88BA6NC98 1476 aa23.87■■□□□ 1.41
SHANK3-203ENST00000445220 TCERG1O14776 1098 aaKnown RBP23.86■■□□□ 1.41
SHANK3-203ENST00000445220 SIN3AQ96ST3 1273 aa23.86■■□□□ 1.41
SHANK3-203ENST00000445220 SMARCA2P51531 1590 aa23.86■■□□□ 1.41
SHANK3-203ENST00000445220 MS4A1P11836 297 aa23.85■■□□□ 1.41
SHANK3-203ENST00000445220 AMER1Q5JTC6 1135 aaPredicted RBP23.84■■□□□ 1.41
SHANK3-203ENST00000445220 FRAT1Q92837 279 aaPredicted RBP23.84■■□□□ 1.41
SHANK3-203ENST00000445220 CHMP4BQ9H444 224 aaKnown RBP23.84■■□□□ 1.41
SHANK3-203ENST00000445220 PTMSP20962 102 aa23.82■■□□□ 1.4
SHANK3-203ENST00000445220 RSPH6AQ9H0K4 717 aa23.81■■□□□ 1.4
SHANK3-203ENST00000445220 GBP4Q96PP9 640 aa23.78■■□□□ 1.4
SHANK3-203ENST00000445220 USP35Q9P2H5 1018 aa23.77■■□□□ 1.4
SHANK3-203ENST00000445220 GOLGA6L3A6NEY3 463 aa23.76■■□□□ 1.39
SHANK3-203ENST00000445220 SETD5Q9C0A6 1442 aa23.76■■□□□ 1.39
SHANK3-203ENST00000445220 HSP90AA2PQ14568 343 aaPredicted RBP23.76■■□□□ 1.39
SHANK3-203ENST00000445220 DNAJC5BQ9UF47 199 aa23.75■■□□□ 1.39
SHANK3-203ENST00000445220 NEUROD2Q15784 382 aa23.75■■□□□ 1.39
SHANK3-203ENST00000445220 SPRYD3Q8NCJ5 442 aa23.75■■□□□ 1.39
SHANK3-203ENST00000445220 EIF4G1Q04637 1599 aaKnown RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms