RNA–Protein interactions for RNA: ENST00000444772.3

SKIDA1-201, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SKIDA1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-201ENST00000444772 DNAJC5BQ9UF47 199 aa31.51■■■□□ 2.63
SKIDA1-201ENST00000444772 DNMBPQ6XZF7 1577 aa31.5■■■□□ 2.63
SKIDA1-201ENST00000444772 SETD5Q9C0A6 1442 aa31.48■■■□□ 2.63
SKIDA1-201ENST00000444772 ABCA10Q8WWZ4 1543 aa31.47■■■□□ 2.63
SKIDA1-201ENST00000444772 EFCAB5A4FU69 1503 aa31.45■■■□□ 2.63
SKIDA1-201ENST00000444772 ITGAEP38570 1179 aa31.45■■■□□ 2.62
SKIDA1-201ENST00000444772 MAPKBP1O60336 1514 aa31.44■■■□□ 2.62
SKIDA1-201ENST00000444772 PHLDB1Q86UU1 1377 aa31.42■■■□□ 2.62
SKIDA1-201ENST00000444772 PCF11O94913 1555 aaKnown RBP31.42■■■□□ 2.62
SKIDA1-201ENST00000444772 CUL7Q14999 1698 aa31.4■■■□□ 2.62
SKIDA1-201ENST00000444772 AQRO60306 1485 aaKnown RBP eCLIP31.39■■■□□ 2.62
SKIDA1-201ENST00000444772 FYCO1Q9BQS8 1478 aa31.39■■■□□ 2.62
SKIDA1-201ENST00000444772 TOPBP1Q92547 1522 aa31.37■■■□□ 2.61
SKIDA1-201ENST00000444772 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.35■■■□□ 2.61
SKIDA1-201ENST00000444772 POLA1P09884 1462 aaPredicted RBP31.35■■■□□ 2.61
SKIDA1-201ENST00000444772 CASKIN1Q8WXD9 1431 aa31.33■■■□□ 2.61
SKIDA1-201ENST00000444772 RAD54L2Q9Y4B4 1467 aa31.3■■■□□ 2.6
SKIDA1-201ENST00000444772 TIMELESSQ9UNS1 1208 aa31.29■■■□□ 2.6
SKIDA1-201ENST00000444772 CTTNBP2Q8WZ74 1663 aa31.29■■■□□ 2.6
SKIDA1-201ENST00000444772 FHOD3Q2V2M9 1422 aa31.26■■■□□ 2.6
SKIDA1-201ENST00000444772 FAM50AQ14320 339 aaKnown RBP31.25■■■□□ 2.59
SKIDA1-201ENST00000444772 NESP48681 1621 aa31.25■■■□□ 2.59
SKIDA1-201ENST00000444772 FMN1Q68DA7 1419 aa31.23■■■□□ 2.59
SKIDA1-201ENST00000444772 P3H3Q8IVL6 736 aa31.21■■■□□ 2.59
SKIDA1-201ENST00000444772 WDR97A6NE52 1622 aa31.16■■■□□ 2.58
SKIDA1-201ENST00000444772 LAMC3Q9Y6N6 1575 aa31.15■■■□□ 2.58
SKIDA1-201ENST00000444772 ATP1B4Q9UN42 357 aaPredicted RBP31.14■■■□□ 2.58
SKIDA1-201ENST00000444772 MYT1Q01538 1121 aa31.1■■■□□ 2.57
SKIDA1-201ENST00000444772 SNAPC4Q5SXM2 1469 aa31.1■■■□□ 2.57
SKIDA1-201ENST00000444772 FGD6Q6ZV73 1430 aa31.08■■■□□ 2.57
SKIDA1-201ENST00000444772 SAMD9Q5K651 1589 aa31.06■■■□□ 2.56
SKIDA1-201ENST00000444772 ABCA5Q8WWZ7 1642 aa31.05■■■□□ 2.56
SKIDA1-201ENST00000444772 URB2Q14146 1524 aaKnown RBP31.04■■■□□ 2.56
SKIDA1-201ENST00000444772 SIN3AQ96ST3 1273 aa31.03■■■□□ 2.56
SKIDA1-201ENST00000444772 THOC2Q8NI27 1593 aaKnown RBP31.03■■■□□ 2.56
SKIDA1-201ENST00000444772 MTUS2Q5JR59 1369 aa30.99■■■□□ 2.55
SKIDA1-201ENST00000444772 SUPT16HQ9Y5B9 1047 aaKnown RBP30.98■■■□□ 2.55
SKIDA1-201ENST00000444772 GAPVD1Q14C86 1478 aa30.96■■■□□ 2.55
SKIDA1-201ENST00000444772 PPP1R15AO75807 674 aaPredicted RBP30.96■■■□□ 2.55
SKIDA1-201ENST00000444772 HFM1A2PYH4 1435 aa30.96■■■□□ 2.55
SKIDA1-201ENST00000444772 GRIN2BQ13224 1484 aa30.93■■■□□ 2.54
SKIDA1-201ENST00000444772 PDS5BQ9NTI5 1447 aa30.92■■■□□ 2.54
SKIDA1-201ENST00000444772 CCDC18Q5T9S5 1454 aa30.92■■■□□ 2.54
SKIDA1-201ENST00000444772 UACAQ9BZF9 1416 aa30.91■■■□□ 2.54
SKIDA1-201ENST00000444772 KIF21AQ7Z4S6 1674 aa30.9■■■□□ 2.54
SKIDA1-201ENST00000444772 MYOM3Q5VTT5 1437 aa30.89■■■□□ 2.54
SKIDA1-201ENST00000444772 TDRD9Q8NDG6 1382 aaKnown RBP30.88■■■□□ 2.53
SKIDA1-201ENST00000444772 EHBP1L1Q8N3D4 1523 aa30.88■■■□□ 2.53
SKIDA1-201ENST00000444772 SUPT6HQ7KZ85 1726 aaKnown RBP30.87■■■□□ 2.53
SKIDA1-201ENST00000444772 PTPN23Q9H3S7 1636 aa30.87■■■□□ 2.53
SKIDA1-201ENST00000444772 NCOA2Q15596 1464 aa30.87■■■□□ 2.53
SKIDA1-201ENST00000444772 DDX10Q13206 875 aaKnown RBP30.86■■■□□ 2.53
SKIDA1-201ENST00000444772 LRRIQ1Q96JM4 1722 aa30.85■■■□□ 2.53
SKIDA1-201ENST00000444772 TONSLQ96HA7 1378 aa30.82■■■□□ 2.52
SKIDA1-201ENST00000444772 PTPRKQ15262 1439 aa30.81■■■□□ 2.52
SKIDA1-201ENST00000444772 NAIPQ13075 1403 aa30.79■■■□□ 2.52
SKIDA1-201ENST00000444772 CCER2I3L3R5 266 aa30.78■■■□□ 2.52
SKIDA1-201ENST00000444772 ARHGEF11O15085 1522 aa30.77■■■□□ 2.52
SKIDA1-201ENST00000444772 KCNH8Q96L42 1107 aa30.77■■■□□ 2.52
SKIDA1-201ENST00000444772 UGGT2Q9NYU1 1516 aa30.76■■■□□ 2.52
SKIDA1-201ENST00000444772 TARBP1Q13395 1621 aaKnown RBP30.73■■■□□ 2.51
SKIDA1-201ENST00000444772 TCOF1Q13428 1488 aaKnown RBP30.69■■■□□ 2.5
SKIDA1-201ENST00000444772 ANP32CO43423 234 aa30.69■■■□□ 2.5
SKIDA1-201ENST00000444772 HECW1Q76N89 1606 aa30.68■■■□□ 2.5
SKIDA1-201ENST00000444772 AKNAQ7Z591 1439 aa30.65■■■□□ 2.5
SKIDA1-201ENST00000444772 GCC2Q8IWJ2 1684 aa30.61■■■□□ 2.49
SKIDA1-201ENST00000444772 MAGI3Q5TCQ9 1506 aa30.61■■■□□ 2.49
SKIDA1-201ENST00000444772 PBRM1Q86U86 1689 aa30.6■■■□□ 2.49
SKIDA1-201ENST00000444772 IQGAP2Q13576 1575 aa30.6■■■□□ 2.49
SKIDA1-201ENST00000444772 MIA2Q96PC5 1412 aa30.58■■■□□ 2.49
SKIDA1-201ENST00000444772 KDM5BQ9UGL1 1544 aa30.55■■■□□ 2.48
SKIDA1-201ENST00000444772 HIRIP3Q9BW71 556 aaPredicted RBP30.55■■■□□ 2.48
SKIDA1-201ENST00000444772 EPRSP07814 1512 aaKnown RBP30.55■■■□□ 2.48
SKIDA1-201ENST00000444772 ADAMTS12P58397 1594 aa30.54■■■□□ 2.48
SKIDA1-201ENST00000444772 WDR62O43379 1518 aa30.47■■■□□ 2.47
SKIDA1-201ENST00000444772 TSHZ2Q9NRE2 1034 aa30.46■■■□□ 2.47
SKIDA1-201ENST00000444772 MRC2Q9UBG0 1479 aa30.44■■■□□ 2.46
SKIDA1-201ENST00000444772 RRP7BPQ9NSQ0 103 aa30.43■■■□□ 2.46
SKIDA1-201ENST00000444772 NEFLP07196 543 aa30.42■■■□□ 2.46
SKIDA1-201ENST00000444772 FKBP8Q14318 412 aa30.4■■■□□ 2.46
SKIDA1-201ENST00000444772 DENND4BO75064 1496 aaPredicted RBP30.4■■■□□ 2.46
SKIDA1-201ENST00000444772 CDK13Q14004 1512 aaKnown RBP30.37■■■□□ 2.45
SKIDA1-201ENST00000444772 ERCC6Q03468 1493 aa30.37■■■□□ 2.45
SKIDA1-201ENST00000444772 CHIC2Q9UKJ5 165 aa30.36■■■□□ 2.45
SKIDA1-201ENST00000444772 ROCK1Q13464 1354 aa30.36■■■□□ 2.45
SKIDA1-201ENST00000444772 TRIM52Q96A61 297 aa30.35■■■□□ 2.45
SKIDA1-201ENST00000444772 MPHOSPH9Q99550 1183 aa30.32■■■□□ 2.44
SKIDA1-201ENST00000444772 KDM6BO15054 1643 aa30.32■■■□□ 2.44
SKIDA1-201ENST00000444772 IFT140Q96RY7 1462 aa30.29■■■□□ 2.44
SKIDA1-201ENST00000444772 KIAA0586Q9BVV6 1533 aa30.29■■■□□ 2.44
SKIDA1-201ENST00000444772 EIF4G2P78344 907 aaKnown RBP eCLIP30.29■■■□□ 2.44
SKIDA1-201ENST00000444772 HSPA5P11021 654 aaKnown RBP30.28■■■□□ 2.44
SKIDA1-201ENST00000444772 DAPK1P53355 1430 aa30.26■■■□□ 2.43
SKIDA1-201ENST00000444772 KIAA0556O60303 1618 aa30.25■■■□□ 2.43
SKIDA1-201ENST00000444772 DNMT1P26358 1616 aaKnown RBP30.25■■■□□ 2.43
SKIDA1-201ENST00000444772 WASHC2AQ641Q2 1341 aa30.25■■■□□ 2.43
SKIDA1-201ENST00000444772 BCANQ96GW7 911 aa30.24■■■□□ 2.43
SKIDA1-201ENST00000444772 DISP1Q96F81 1524 aa30.21■■■□□ 2.43
SKIDA1-201ENST00000444772 RPRD2Q5VT52 1461 aaKnown RBP30.2■■■□□ 2.42
SKIDA1-201ENST00000444772 CDK11AQ9UQ88 783 aaPredicted RBP30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms