RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 GSE1Q14687 1217 aa13□□□□□ -0.33
R3HDM1-210ENST00000443537 DCAF8Q5TAQ9 597 aa13□□□□□ -0.33
R3HDM1-210ENST00000443537 CHADLQ6NUI6 762 aa13□□□□□ -0.33
R3HDM1-210ENST00000443537 FAM212AQ96EL1 285 aa12.97□□□□□ -0.33
R3HDM1-210ENST00000443537 SLC24A1O60721 1099 aa12.95□□□□□ -0.34
R3HDM1-210ENST00000443537 TRIM41Q8WV44 630 aa12.95□□□□□ -0.34
R3HDM1-210ENST00000443537 PRKAR2AP13861 404 aaKnown RBP12.94□□□□□ -0.34
R3HDM1-210ENST00000443537 CHRDL2Q6WN34 429 aa12.94□□□□□ -0.34
R3HDM1-210ENST00000443537 RGL2O15211 777 aa12.93□□□□□ -0.34
R3HDM1-210ENST00000443537 RASEFQ8IZ41 740 aa12.9□□□□□ -0.34
R3HDM1-210ENST00000443537 FXR2P51116 673 aaKnown RBP eCLIP12.89□□□□□ -0.35
R3HDM1-210ENST00000443537 FARP1Q9Y4F1 1045 aaPredicted RBP12.89□□□□□ -0.35
R3HDM1-210ENST00000443537 PIP4P2Q8N4L2 257 aa12.83□□□□□ -0.36
R3HDM1-210ENST00000443537 TSPYL2Q9H2G4 693 aaPredicted RBP12.81□□□□□ -0.36
R3HDM1-210ENST00000443537 BAZ1AQ9NRL2 1556 aaPredicted RBP12.8□□□□□ -0.36
R3HDM1-210ENST00000443537 CHGAP10645 457 aaKnown RBP12.76□□□□□ -0.37
R3HDM1-210ENST00000443537 PYGBP11216 843 aa12.76□□□□□ -0.37
R3HDM1-210ENST00000443537 RIOK3O14730 519 aaKnown RBP12.74□□□□□ -0.37
R3HDM1-210ENST00000443537 RNF25Q96BH1 459 aaPredicted RBP12.74□□□□□ -0.37
R3HDM1-210ENST00000443537 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.74□□□□□ -0.37
R3HDM1-210ENST00000443537 TAOK2Q9UL54 1235 aa12.74□□□□□ -0.37
R3HDM1-210ENST00000443537 PAK3O75914 559 aaPredicted RBP12.73□□□□□ -0.37
R3HDM1-210ENST00000443537 CHRM1P11229 460 aaPredicted RBP12.73□□□□□ -0.37
R3HDM1-210ENST00000443537 PLCB2Q00722 1185 aa12.73□□□□□ -0.37
R3HDM1-210ENST00000443537 SMARCA4P51532 1647 aa12.73□□□□□ -0.37
R3HDM1-210ENST00000443537 BBXQ8WY36 941 aaPredicted RBP12.72□□□□□ -0.37
R3HDM1-210ENST00000443537 CECR2Q9BXF3 1484 aa12.67□□□□□ -0.38
R3HDM1-210ENST00000443537 EIF4G1Q04637 1599 aaKnown RBP12.66□□□□□ -0.38
R3HDM1-210ENST00000443537 PEG3Q9GZU2 1588 aa12.65□□□□□ -0.38
R3HDM1-210ENST00000443537 VGFO15240 615 aaPredicted RBP12.65□□□□□ -0.38
R3HDM1-210ENST00000443537 HS6ST3Q8IZP7 471 aa12.64□□□□□ -0.39
R3HDM1-210ENST00000443537 HAP1P54257 671 aaPredicted RBP12.63□□□□□ -0.39
R3HDM1-210ENST00000443537 PAXIP1Q6ZW49 1069 aaPredicted RBP12.63□□□□□ -0.39
R3HDM1-210ENST00000443537 MROH2BQ7Z745 1585 aa12.63□□□□□ -0.39
R3HDM1-210ENST00000443537 RSF1Q96T23 1441 aaPredicted RBP12.62□□□□□ -0.39
R3HDM1-210ENST00000443537 SMARCA2P51531 1590 aa12.62□□□□□ -0.39
R3HDM1-210ENST00000443537 CFAP44Q96MT7 982 aa12.62□□□□□ -0.39
R3HDM1-210ENST00000443537 CCDC61Q9Y6R9 512 aa12.62□□□□□ -0.39
R3HDM1-210ENST00000443537 STK25O00506 426 aa12.61□□□□□ -0.39
R3HDM1-210ENST00000443537 CD44P16070 742 aaKnown RBP12.59□□□□□ -0.39
R3HDM1-210ENST00000443537 ZNF467Q7Z7K2 595 aaPredicted RBP12.59□□□□□ -0.39
R3HDM1-210ENST00000443537 ZRANB1Q9UGI0 708 aa12.58□□□□□ -0.4
R3HDM1-210ENST00000443537 SPRYD3Q8NCJ5 442 aa12.57□□□□□ -0.4
R3HDM1-210ENST00000443537 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.56□□□□□ -0.4
R3HDM1-210ENST00000443537 ZFP91Q96JP5 570 aaPredicted RBP12.56□□□□□ -0.4
R3HDM1-210ENST00000443537 PCDHB8Q9UN66 801 aa12.55□□□□□ -0.4
R3HDM1-210ENST00000443537 PCDHB13Q9Y5F0 798 aa12.55□□□□□ -0.4
R3HDM1-210ENST00000443537 STK24Q9Y6E0 443 aa12.55□□□□□ -0.4
R3HDM1-210ENST00000443537 WIZO95785 1651 aa12.54□□□□□ -0.4
R3HDM1-210ENST00000443537 HMGXB3Q12766 1538 aa12.53□□□□□ -0.4
R3HDM1-210ENST00000443537 BCL11BQ9C0K0 894 aaPredicted RBP12.53□□□□□ -0.4
R3HDM1-210ENST00000443537 ATAD2BQ9ULI0 1458 aa12.52□□□□□ -0.41
R3HDM1-210ENST00000443537 SGIP1Q9BQI5 828 aa12.51□□□□□ -0.41
R3HDM1-210ENST00000443537 CC2D2AQ9P2K1 1620 aa12.51□□□□□ -0.41
R3HDM1-210ENST00000443537 PDAP1Q13442 181 aaKnown RBP12.5□□□□□ -0.41
R3HDM1-210ENST00000443537 TOP2AP11388 1531 aaKnown RBP12.5□□□□□ -0.41
R3HDM1-210ENST00000443537 NCAPD3P42695 1498 aa12.49□□□□□ -0.41
R3HDM1-210ENST00000443537 MAP3K13O43283 966 aa12.49□□□□□ -0.41
R3HDM1-210ENST00000443537 ZNF579Q8NAF0 562 aaKnown RBP12.49□□□□□ -0.41
R3HDM1-210ENST00000443537 KIF12Q96FN5 646 aa12.48□□□□□ -0.41
R3HDM1-210ENST00000443537 PHF12Q96QT6 1004 aa12.48□□□□□ -0.41
R3HDM1-210ENST00000443537 BAZ1BQ9UIG0 1483 aaKnown RBP12.46□□□□□ -0.41
R3HDM1-210ENST00000443537 SUPT5HO00267 1087 aaKnown RBP12.46□□□□□ -0.41
R3HDM1-210ENST00000443537 IFNL1Q8IU54 200 aa12.46□□□□□ -0.41
R3HDM1-210ENST00000443537 DNAJC5Q9H3Z4 198 aa12.46□□□□□ -0.41
R3HDM1-210ENST00000443537 PSEN1P49768 467 aa12.45□□□□□ -0.42
R3HDM1-210ENST00000443537 C19orf67A6NJJ6 358 aa12.44□□□□□ -0.42
R3HDM1-210ENST00000443537 NKX1-1Q15270 411 aaPredicted RBP12.43□□□□□ -0.42
R3HDM1-210ENST00000443537 HAX1O00165 279 aa12.4□□□□□ -0.42
R3HDM1-210ENST00000443537 VSIG10Q8N0Z9 540 aa12.37□□□□□ -0.43
R3HDM1-210ENST00000443537 RYDENQ9NUL5 291 aaKnown RBP12.37□□□□□ -0.43
R3HDM1-210ENST00000443537 TSHZ2Q9NRE2 1034 aa12.36□□□□□ -0.43
R3HDM1-210ENST00000443537 GTPBP6O43824 516 aaPredicted RBP12.35□□□□□ -0.43
R3HDM1-210ENST00000443537 MS4A3Q96HJ5 214 aa12.32□□□□□ -0.44
R3HDM1-210ENST00000443537 CABP2Q9NPB3 220 aa12.31□□□□□ -0.44
R3HDM1-210ENST00000443537 GOLGA2Q08379 1002 aa12.28□□□□□ -0.44
R3HDM1-210ENST00000443537 TMEM106CQ9BVX2 250 aa12.27□□□□□ -0.45
R3HDM1-210ENST00000443537 CCDC88BA6NC98 1476 aa12.26□□□□□ -0.45
R3HDM1-210ENST00000443537 EFCAB3Q8N7B9 438 aa12.25□□□□□ -0.45
R3HDM1-210ENST00000443537 KDM2AQ9Y2K7 1162 aa12.25□□□□□ -0.45
R3HDM1-210ENST00000443537 PRDM2Q13029 1718 aa12.24□□□□□ -0.45
R3HDM1-210ENST00000443537 EVX2Q03828 476 aa12.23□□□□□ -0.45
R3HDM1-210ENST00000443537 TRPC6Q9Y210 931 aa12.23□□□□□ -0.45
R3HDM1-210ENST00000443537 MFRPQ9BY79 579 aa12.21□□□□□ -0.45
R3HDM1-210ENST00000443537 SOX12O15370 315 aa12.2□□□□□ -0.46
R3HDM1-210ENST00000443537 NLRP6P59044 892 aa12.2□□□□□ -0.46
R3HDM1-210ENST00000443537 GALR2O43603 387 aaPredicted RBP12.19□□□□□ -0.46
R3HDM1-210ENST00000443537 TIE1P35590 1138 aa12.18□□□□□ -0.46
R3HDM1-210ENST00000443537 CLCN6P51797 869 aa12.18□□□□□ -0.46
R3HDM1-210ENST00000443537 MKRN3Q13064 507 aaKnown RBP12.17□□□□□ -0.46
R3HDM1-210ENST00000443537 POTEHQ6S545 545 aa12.17□□□□□ -0.46
R3HDM1-210ENST00000443537 PHF8Q9UPP1 1060 aa12.17□□□□□ -0.46
R3HDM1-210ENST00000443537 LAMC3Q9Y6N6 1575 aa12.17□□□□□ -0.46
R3HDM1-210ENST00000443537 CFTRP13569 1480 aa12.14□□□□□ -0.47
R3HDM1-210ENST00000443537 TTLL13PA6NNM8 815 aa12.14□□□□□ -0.47
R3HDM1-210ENST00000443537 BMP2KQ9NSY1 1161 aaPredicted RBP12.13□□□□□ -0.47
R3HDM1-210ENST00000443537 FBXO22Q8NEZ5 403 aa12.12□□□□□ -0.47
R3HDM1-210ENST00000443537 CADPSQ9ULU8 1353 aa12.11□□□□□ -0.47
R3HDM1-210ENST00000443537 TRIM35Q9UPQ4 493 aa12.09□□□□□ -0.47
R3HDM1-210ENST00000443537 PPP1R37O75864 691 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms