RNA–Protein interactions for RNA: ENST00000439655.1

AC000041.1-201, humanhuman

BASIC

Gene AC000041.1, Length 175 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC000041.1-201ENST00000439655 PKD2Q13563 968 aa12.16□□□□□ -0.46
AC000041.1-201ENST00000439655 FAM212AQ96EL1 285 aa12.15□□□□□ -0.46
AC000041.1-201ENST00000439655 ZNF579Q8NAF0 562 aaKnown RBP12.13□□□□□ -0.47
AC000041.1-201ENST00000439655 SP7Q8TDD2 431 aaPredicted RBP12.13□□□□□ -0.47
AC000041.1-201ENST00000439655 CIZ1Q9ULV3 898 aaPredicted RBP12.12□□□□□ -0.47
AC000041.1-201ENST00000439655 ECM2O94769 699 aaPredicted RBP12.11□□□□□ -0.47
AC000041.1-201ENST00000439655 CCDC61Q9Y6R9 512 aa12.11□□□□□ -0.47
AC000041.1-201ENST00000439655 DCAF8Q5TAQ9 597 aa12.09□□□□□ -0.47
AC000041.1-201ENST00000439655 PHF12Q96QT6 1004 aa12.08□□□□□ -0.48
AC000041.1-201ENST00000439655 GSE1Q14687 1217 aa12.07□□□□□ -0.48
AC000041.1-201ENST00000439655 SLC24A1O60721 1099 aa12.04□□□□□ -0.48
AC000041.1-201ENST00000439655 CLCN6P51797 869 aa12.01□□□□□ -0.49
AC000041.1-201ENST00000439655 GABBR2O75899 941 aa12□□□□□ -0.49
AC000041.1-201ENST00000439655 KIF12Q96FN5 646 aa12□□□□□ -0.49
AC000041.1-201ENST00000439655 PYGBP11216 843 aa11.97□□□□□ -0.49
AC000041.1-201ENST00000439655 MAP3K13O43283 966 aa11.95□□□□□ -0.5
AC000041.1-201ENST00000439655 MS4A3Q96HJ5 214 aa11.94□□□□□ -0.5
AC000041.1-201ENST00000439655 RGL2O15211 777 aa11.93□□□□□ -0.5
AC000041.1-201ENST00000439655 GALR2O43603 387 aaPredicted RBP11.93□□□□□ -0.5
AC000041.1-201ENST00000439655 TRIM41Q8WV44 630 aa11.93□□□□□ -0.5
AC000041.1-201ENST00000439655 CHRM1P11229 460 aaPredicted RBP11.92□□□□□ -0.5
AC000041.1-201ENST00000439655 SGIP1Q9BQI5 828 aa11.91□□□□□ -0.5
AC000041.1-201ENST00000439655 PCDHB13Q9Y5F0 798 aa11.91□□□□□ -0.5
AC000041.1-201ENST00000439655 IFNL1Q8IU54 200 aa11.86□□□□□ -0.51
AC000041.1-201ENST00000439655 ZNF467Q7Z7K2 595 aaPredicted RBP11.82□□□□□ -0.52
AC000041.1-201ENST00000439655 PCDHB8Q9UN66 801 aa11.82□□□□□ -0.52
AC000041.1-201ENST00000439655 TRPC6Q9Y210 931 aa11.81□□□□□ -0.52
AC000041.1-201ENST00000439655 PLCB2Q00722 1185 aa11.8□□□□□ -0.52
AC000041.1-201ENST00000439655 RNF25Q96BH1 459 aaPredicted RBP11.79□□□□□ -0.52
AC000041.1-201ENST00000439655 CHGAP10645 457 aaKnown RBP11.78□□□□□ -0.52
AC000041.1-201ENST00000439655 DCBLD2Q96PD2 775 aa11.78□□□□□ -0.52
AC000041.1-201ENST00000439655 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.78□□□□□ -0.52
AC000041.1-201ENST00000439655 POTEIP0CG38 1075 aa11.76□□□□□ -0.53
AC000041.1-201ENST00000439655 TIE1P35590 1138 aa11.76□□□□□ -0.53
AC000041.1-201ENST00000439655 BBXQ8WY36 941 aaPredicted RBP11.76□□□□□ -0.53
AC000041.1-201ENST00000439655 BMP2KQ9NSY1 1161 aaPredicted RBP11.75□□□□□ -0.53
AC000041.1-201ENST00000439655 TAOK2Q9UL54 1235 aa11.75□□□□□ -0.53
AC000041.1-201ENST00000439655 RIOK3O14730 519 aaKnown RBP11.74□□□□□ -0.53
AC000041.1-201ENST00000439655 ASTLQ6HA08 431 aaPredicted RBP11.73□□□□□ -0.53
AC000041.1-201ENST00000439655 ATMINO43313 823 aaPredicted RBP11.72□□□□□ -0.53
AC000041.1-201ENST00000439655 TTLL13PA6NNM8 815 aa11.71□□□□□ -0.53
AC000041.1-201ENST00000439655 HAP1P54257 671 aaPredicted RBP11.71□□□□□ -0.53
AC000041.1-201ENST00000439655 PDAP1Q13442 181 aaKnown RBP11.71□□□□□ -0.53
AC000041.1-201ENST00000439655 TMEM106CQ9BVX2 250 aa11.7□□□□□ -0.54
AC000041.1-201ENST00000439655 PSEN1P49768 467 aa11.69□□□□□ -0.54
AC000041.1-201ENST00000439655 ATN1P54259 1190 aaPredicted RBP11.68□□□□□ -0.54
AC000041.1-201ENST00000439655 PAXIP1Q6ZW49 1069 aaPredicted RBP11.68□□□□□ -0.54
AC000041.1-201ENST00000439655 CFAP44Q96MT7 982 aa11.68□□□□□ -0.54
AC000041.1-201ENST00000439655 VGFO15240 615 aaPredicted RBP11.67□□□□□ -0.54
AC000041.1-201ENST00000439655 HS6ST3Q8IZP7 471 aa11.66□□□□□ -0.54
AC000041.1-201ENST00000439655 PELP1Q8IZL8 1130 aaKnown RBP11.65□□□□□ -0.54
AC000041.1-201ENST00000439655 STK25O00506 426 aa11.63□□□□□ -0.55
AC000041.1-201ENST00000439655 TRIM35Q9UPQ4 493 aa11.63□□□□□ -0.55
AC000041.1-201ENST00000439655 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.62□□□□□ -0.55
AC000041.1-201ENST00000439655 ZFP91Q96JP5 570 aaPredicted RBP11.62□□□□□ -0.55
AC000041.1-201ENST00000439655 SPRYD3Q8NCJ5 442 aa11.61□□□□□ -0.55
AC000041.1-201ENST00000439655 SLC39A7Q92504 469 aa11.58□□□□□ -0.56
AC000041.1-201ENST00000439655 STK24Q9Y6E0 443 aa11.58□□□□□ -0.56
AC000041.1-201ENST00000439655 BCL11BQ9C0K0 894 aaPredicted RBP11.56□□□□□ -0.56
AC000041.1-201ENST00000439655 CABP2Q9NPB3 220 aa11.55□□□□□ -0.56
AC000041.1-201ENST00000439655 C7P10643 843 aa11.54□□□□□ -0.56
AC000041.1-201ENST00000439655 IER5LQ5T953 404 aa11.54□□□□□ -0.56
AC000041.1-201ENST00000439655 METRNQ9UJH8 293 aa11.54□□□□□ -0.56
AC000041.1-201ENST00000439655 GOLGA2Q08379 1002 aa11.53□□□□□ -0.56
AC000041.1-201ENST00000439655 MKRN3Q13064 507 aaKnown RBP11.5□□□□□ -0.57
AC000041.1-201ENST00000439655 DNAJC5Q9H3Z4 198 aa11.5□□□□□ -0.57
AC000041.1-201ENST00000439655 EFCAB3Q8N7B9 438 aa11.48□□□□□ -0.57
AC000041.1-201ENST00000439655 POTEFA5A3E0 1075 aa11.47□□□□□ -0.57
AC000041.1-201ENST00000439655 IRX5P78411 483 aaPredicted RBP11.47□□□□□ -0.57
AC000041.1-201ENST00000439655 NKX1-1Q15270 411 aaPredicted RBP11.47□□□□□ -0.57
AC000041.1-201ENST00000439655 COLQQ9Y215 455 aaPredicted RBP11.46□□□□□ -0.57
AC000041.1-201ENST00000439655 SEC24BO95487 1268 aa11.45□□□□□ -0.58
AC000041.1-201ENST00000439655 VSIG10Q8N0Z9 540 aa11.45□□□□□ -0.58
AC000041.1-201ENST00000439655 PLCG2P16885 1265 aa11.43□□□□□ -0.58
AC000041.1-201ENST00000439655 OCEL1Q9H607 264 aa11.42□□□□□ -0.58
AC000041.1-201ENST00000439655 TSHZ2Q9NRE2 1034 aa11.42□□□□□ -0.58
AC000041.1-201ENST00000439655 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.42□□□□□ -0.58
AC000041.1-201ENST00000439655 ILDR1Q86SU0 546 aaPredicted RBP11.41□□□□□ -0.58
AC000041.1-201ENST00000439655 RYDENQ9NUL5 291 aaKnown RBP11.41□□□□□ -0.58
AC000041.1-201ENST00000439655 SOX12O15370 315 aa11.4□□□□□ -0.58
AC000041.1-201ENST00000439655 GTPBP6O43824 516 aaPredicted RBP11.4□□□□□ -0.58
AC000041.1-201ENST00000439655 PDCD7Q8N8D1 485 aaKnown RBP11.4□□□□□ -0.58
AC000041.1-201ENST00000439655 POTEB2H3BUK9 544 aa11.39□□□□□ -0.59
AC000041.1-201ENST00000439655 LHX8Q68G74 356 aa11.37□□□□□ -0.59
AC000041.1-201ENST00000439655 PHF8Q9UPP1 1060 aa11.37□□□□□ -0.59
AC000041.1-201ENST00000439655 MFRPQ9BY79 579 aa11.36□□□□□ -0.59
AC000041.1-201ENST00000439655 KDM2AQ9Y2K7 1162 aa11.34□□□□□ -0.59
AC000041.1-201ENST00000439655 NLRP6P59044 892 aa11.33□□□□□ -0.6
AC000041.1-201ENST00000439655 FBXO22Q8NEZ5 403 aa11.33□□□□□ -0.6
AC000041.1-201ENST00000439655 MS4A4AQ96JQ5 239 aa11.33□□□□□ -0.6
AC000041.1-201ENST00000439655 POTEJP0CG39 1038 aa11.32□□□□□ -0.6
AC000041.1-201ENST00000439655 DPY19L2Q6NUT2 758 aa11.31□□□□□ -0.6
AC000041.1-201ENST00000439655 L3MBTL3Q96JM7 780 aaPredicted RBP11.26□□□□□ -0.61
AC000041.1-201ENST00000439655 MAMSTRQ6ZN01 415 aa11.24□□□□□ -0.61
AC000041.1-201ENST00000439655 OTUD5Q96G74 571 aa11.23□□□□□ -0.61
AC000041.1-201ENST00000439655 BOLA1Q9Y3E2 137 aa11.23□□□□□ -0.61
AC000041.1-201ENST00000439655 SCUBE2Q9NQ36 999 aa11.22□□□□□ -0.61
AC000041.1-201ENST00000439655 BCANQ96GW7 911 aa11.21□□□□□ -0.61
AC000041.1-201ENST00000439655 G3V3G9 751 aa11.2□□□□□ -0.62
AC000041.1-201ENST00000439655 TMEM121BQ9BXQ6 578 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms