RNA–Protein interactions for RNA: ENST00000437974.5

ARHGEF28-204, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ARHGEF28, Length 5,792 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-204ENST00000437974 CCDC180Q9P1Z9 1646 aa24.35■■□□□ 1.49
ARHGEF28-204ENST00000437974 RRP7BPQ9NSQ0 103 aa24.35■■□□□ 1.49
ARHGEF28-204ENST00000437974 MRS2Q9HD23 443 aa24.34■■□□□ 1.49
ARHGEF28-204ENST00000437974 CLIP1P30622 1438 aa24.34■■□□□ 1.49
ARHGEF28-204ENST00000437974 RB1CC1Q8TDY2 1594 aa24.33■■□□□ 1.49
ARHGEF28-204ENST00000437974 HAP1P54257 671 aaPredicted RBP24.33■■□□□ 1.49
ARHGEF28-204ENST00000437974 HIRIP3Q9BW71 556 aaPredicted RBP24.33■■□□□ 1.49
ARHGEF28-204ENST00000437974 MYH16Q9H6N6 1097 aa24.33■■□□□ 1.49
ARHGEF28-204ENST00000437974 RSF1Q96T23 1441 aaPredicted RBP24.32■■□□□ 1.48
ARHGEF28-204ENST00000437974 CCDC136Q96JN2 1154 aa24.3■■□□□ 1.48
ARHGEF28-204ENST00000437974 EIF4G2P78344 907 aaKnown RBP eCLIP24.25■■□□□ 1.47
ARHGEF28-204ENST00000437974 IRX6P78412 446 aaPredicted RBP24.24■■□□□ 1.47
ARHGEF28-204ENST00000437974 RGL3Q3MIN7 710 aa24.22■■□□□ 1.47
ARHGEF28-204ENST00000437974 CFDP1Q9UEE9 299 aaPredicted RBP24.2■■□□□ 1.46
ARHGEF28-204ENST00000437974 CEP162Q5TB80 1403 aa24.19■■□□□ 1.46
ARHGEF28-204ENST00000437974 NBR1Q14596 966 aa24.18■■□□□ 1.46
ARHGEF28-204ENST00000437974 GOLGA3Q08378 1498 aa24.17■■□□□ 1.46
ARHGEF28-204ENST00000437974 CFAP53Q96M91 514 aa24.15■■□□□ 1.46
ARHGEF28-204ENST00000437974 ERCC6Q03468 1493 aa24.15■■□□□ 1.46
ARHGEF28-204ENST00000437974 CDCA8Q53HL2 280 aa24.14■■□□□ 1.45
ARHGEF28-204ENST00000437974 BAZ1BQ9UIG0 1483 aaKnown RBP24.11■■□□□ 1.45
ARHGEF28-204ENST00000437974 EIF5BO60841 1220 aaKnown RBP24.1■■□□□ 1.45
ARHGEF28-204ENST00000437974 ARXQ96QS3 562 aa24.1■■□□□ 1.45
ARHGEF28-204ENST00000437974 EEA1Q15075 1411 aa24.09■■□□□ 1.45
ARHGEF28-204ENST00000437974 PPM1GO15355 546 aaPredicted RBP24.07■■□□□ 1.44
ARHGEF28-204ENST00000437974 CDK11BP21127 795 aaKnown RBP24.06■■□□□ 1.44
ARHGEF28-204ENST00000437974 KNSTRNQ9Y448 316 aa24.05■■□□□ 1.44
ARHGEF28-204ENST00000437974 KIF27Q86VH2 1401 aa24.04■■□□□ 1.44
ARHGEF28-204ENST00000437974 LMOD2Q6P5Q4 547 aa24.04■■□□□ 1.44
ARHGEF28-204ENST00000437974 POGKQ9P215 609 aa24.02■■□□□ 1.44
ARHGEF28-204ENST00000437974 WRNQ14191 1432 aaPredicted RBP eCLIP24.02■■□□□ 1.44
ARHGEF28-204ENST00000437974 CARD11Q9BXL7 1154 aa23.98■■□□□ 1.43
ARHGEF28-204ENST00000437974 TRHP20396 242 aaPredicted RBP23.97■■□□□ 1.43
ARHGEF28-204ENST00000437974 TNIKQ9UKE5 1360 aa23.93■■□□□ 1.42
ARHGEF28-204ENST00000437974 MAPK8IP3Q9UPT6 1336 aa23.92■■□□□ 1.42
ARHGEF28-204ENST00000437974 NUDCQ9Y266 331 aa23.92■■□□□ 1.42
ARHGEF28-204ENST00000437974 NACADO15069 1562 aa23.92■■□□□ 1.42
ARHGEF28-204ENST00000437974 SENP3-EIF4A1A0A087X0R7 540 aa23.92■■□□□ 1.42
ARHGEF28-204ENST00000437974 NPHP1O15259 732 aa23.89■■□□□ 1.41
ARHGEF28-204ENST00000437974 NCLP19338 710 aaKnown RBP23.89■■□□□ 1.41
ARHGEF28-204ENST00000437974 LAS1LQ9Y4W2 734 aaKnown RBP23.87■■□□□ 1.41
ARHGEF28-204ENST00000437974 CEP164Q9UPV0 1460 aa23.87■■□□□ 1.41
ARHGEF28-204ENST00000437974 FTSJ3Q8IY81 847 aaKnown RBP23.86■■□□□ 1.41
ARHGEF28-204ENST00000437974 BECN1Q14457 450 aa23.85■■□□□ 1.41
ARHGEF28-204ENST00000437974 HDGFP51858 240 aaKnown RBP23.85■■□□□ 1.41
ARHGEF28-204ENST00000437974 NEUROD2Q15784 382 aa23.84■■□□□ 1.41
ARHGEF28-204ENST00000437974 CASC1Q6TDU7 716 aa23.84■■□□□ 1.41
ARHGEF28-204ENST00000437974 CCNB3Q8WWL7 1395 aa23.83■■□□□ 1.4
ARHGEF28-204ENST00000437974 KANK1Q14678 1352 aa23.82■■□□□ 1.4
ARHGEF28-204ENST00000437974 MLECQ14165 292 aa23.81■■□□□ 1.4
ARHGEF28-204ENST00000437974 SUPT16HQ9Y5B9 1047 aaKnown RBP23.81■■□□□ 1.4
ARHGEF28-204ENST00000437974 SIN3AQ96ST3 1273 aa23.8■■□□□ 1.4
ARHGEF28-204ENST00000437974 DDRGK1Q96HY6 314 aa23.77■■□□□ 1.4
ARHGEF28-204ENST00000437974 TNNT2P45379 298 aaPredicted RBP23.76■■□□□ 1.39
ARHGEF28-204ENST00000437974 GOLGA6L22H0YM25 854 aa23.76■■□□□ 1.39
ARHGEF28-204ENST00000437974 EIF4G1Q04637 1599 aaKnown RBP23.73■■□□□ 1.39
ARHGEF28-204ENST00000437974 ZRSR1Q15695 479 aaKnown RBP23.73■■□□□ 1.39
ARHGEF28-204ENST00000437974 PNNQ9H307 717 aaKnown RBP23.73■■□□□ 1.39
ARHGEF28-204ENST00000437974 U2SURPO15042 1029 aaKnown RBP23.72■■□□□ 1.39
ARHGEF28-204ENST00000437974 CHMP4BQ9H444 224 aaKnown RBP23.69■■□□□ 1.38
ARHGEF28-204ENST00000437974 OS9Q13438 667 aaPredicted RBP23.68■■□□□ 1.38
ARHGEF28-204ENST00000437974 FHAD1B1AJZ9 1412 aa23.67■■□□□ 1.38
ARHGEF28-204ENST00000437974 CC2D1BQ5T0F9 858 aaKnown RBP23.67■■□□□ 1.38
ARHGEF28-204ENST00000437974 TMF1P82094 1093 aa23.66■■□□□ 1.38
ARHGEF28-204ENST00000437974 ANP32EQ9BTT0 268 aa23.65■■□□□ 1.38
ARHGEF28-204ENST00000437974 SRPK2P78362 688 aaKnown RBP23.65■■□□□ 1.38
ARHGEF28-204ENST00000437974 DCAF11Q8TEB1 546 aa23.65■■□□□ 1.38
ARHGEF28-204ENST00000437974 CARMIL1Q5VZK9 1371 aa23.64■■□□□ 1.38
ARHGEF28-204ENST00000437974 FRAT1Q92837 279 aaPredicted RBP23.64■■□□□ 1.37
ARHGEF28-204ENST00000437974 GOLGA2Q08379 1002 aa23.63■■□□□ 1.37
ARHGEF28-204ENST00000437974 TULP1O00294 542 aaPredicted RBP23.62■■□□□ 1.37
ARHGEF28-204ENST00000437974 MS4A1P11836 297 aa23.62■■□□□ 1.37
ARHGEF28-204ENST00000437974 GLIPR1L2Q4G1C9 344 aa23.62■■□□□ 1.37
ARHGEF28-204ENST00000437974 SOX12O15370 315 aa23.61■■□□□ 1.37
ARHGEF28-204ENST00000437974 GGT6Q6P531 493 aa23.61■■□□□ 1.37
ARHGEF28-204ENST00000437974 BAZ1AQ9NRL2 1556 aaPredicted RBP23.61■■□□□ 1.37
ARHGEF28-204ENST00000437974 CUX2O14529 1486 aa23.61■■□□□ 1.37
ARHGEF28-204ENST00000437974 SOGA1O94964 1423 aa23.58■■□□□ 1.37
ARHGEF28-204ENST00000437974 PPP4R2Q9NY27 417 aa23.58■■□□□ 1.36
ARHGEF28-204ENST00000437974 CECR2Q9BXF3 1484 aa23.57■■□□□ 1.36
ARHGEF28-204ENST00000437974 TRIM44Q96DX7 344 aaPredicted RBP23.57■■□□□ 1.36
ARHGEF28-204ENST00000437974 SAFB2Q14151 953 aaKnown RBP eCLIP23.56■■□□□ 1.36
ARHGEF28-204ENST00000437974 FGD1P98174 961 aa23.55■■□□□ 1.36
ARHGEF28-204ENST00000437974 TPRNQ4KMQ1 711 aa23.54■■□□□ 1.36
ARHGEF28-204ENST00000437974 CARMIL2Q6F5E8 1435 aa23.53■■□□□ 1.36
ARHGEF28-204ENST00000437974 TAOK2Q9UL54 1235 aa23.53■■□□□ 1.36
ARHGEF28-204ENST00000437974 KCNJ4P48050 445 aa23.52■■□□□ 1.36
ARHGEF28-204ENST00000437974 MORC1Q86VD1 984 aa23.52■■□□□ 1.36
ARHGEF28-204ENST00000437974 STK26Q9P289 416 aa23.5■■□□□ 1.35
ARHGEF28-204ENST00000437974 PTMAP06454 111 aaKnown RBP23.49■■□□□ 1.35
ARHGEF28-204ENST00000437974 RTF1Q92541 710 aaKnown RBP23.48■■□□□ 1.35
ARHGEF28-204ENST00000437974 RGS3P49796 1198 aa23.48■■□□□ 1.35
ARHGEF28-204ENST00000437974 HDGFL2Q7Z4V5 671 aaPredicted RBP23.48■■□□□ 1.35
ARHGEF28-204ENST00000437974 NAP1L2Q9ULW6 460 aaPredicted RBP23.46■■□□□ 1.35
ARHGEF28-204ENST00000437974 B4GALNT3Q6L9W6 998 aa23.45■■□□□ 1.35
ARHGEF28-204ENST00000437974 PDS5BQ9NTI5 1447 aa23.44■■□□□ 1.34
ARHGEF28-204ENST00000437974 PAK3O75914 559 aaPredicted RBP23.44■■□□□ 1.34
ARHGEF28-204ENST00000437974 EFCAB2Q5VUJ9 269 aa23.42■■□□□ 1.34
ARHGEF28-204ENST00000437974 CSB-PGBD3P0DP91 1061 aa23.41■■□□□ 1.34
ARHGEF28-204ENST00000437974 PKD2Q13563 968 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms