RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 KDM2AQ9Y2K7 1162 aa21.16■□□□□ 0.98
PTPN13-204ENST00000436978 PPP1R15AO75807 674 aaPredicted RBP21.15■□□□□ 0.98
PTPN13-204ENST00000436978 SCAF1Q9H7N4 1312 aaKnown RBP21.14■□□□□ 0.97
PTPN13-204ENST00000436978 FKBP8Q14318 412 aa21.13■□□□□ 0.97
PTPN13-204ENST00000436978 CEP162Q5TB80 1403 aa21.12■□□□□ 0.97
PTPN13-204ENST00000436978 EIF4G2P78344 907 aaKnown RBP eCLIP21.08■□□□□ 0.96
PTPN13-204ENST00000436978 CDCA8Q53HL2 280 aa21.06■□□□□ 0.96
PTPN13-204ENST00000436978 CCDC136Q96JN2 1154 aa21.05■□□□□ 0.96
PTPN13-204ENST00000436978 MRS2Q9HD23 443 aa21.05■□□□□ 0.96
PTPN13-204ENST00000436978 KCNH8Q96L42 1107 aa21.05■□□□□ 0.96
PTPN13-204ENST00000436978 SALL2Q9Y467 1007 aaPredicted RBP21.02■□□□□ 0.96
PTPN13-204ENST00000436978 RRP7BPQ9NSQ0 103 aa21.01■□□□□ 0.95
PTPN13-204ENST00000436978 C14orf37Q86TY3 774 aa21■□□□□ 0.95
PTPN13-204ENST00000436978 FHAD1B1AJZ9 1412 aa21■□□□□ 0.95
PTPN13-204ENST00000436978 SMARCA2P51531 1590 aa20.99■□□□□ 0.95
PTPN13-204ENST00000436978 EIF4G1Q04637 1599 aaKnown RBP20.99■□□□□ 0.95
PTPN13-204ENST00000436978 ARID4BQ4LE39 1312 aaPredicted RBP20.98■□□□□ 0.95
PTPN13-204ENST00000436978 CFDP1Q9UEE9 299 aaPredicted RBP20.97■□□□□ 0.95
PTPN13-204ENST00000436978 CFAP53Q96M91 514 aa20.96■□□□□ 0.95
PTPN13-204ENST00000436978 TNIKQ9UKE5 1360 aa20.93■□□□□ 0.94
PTPN13-204ENST00000436978 EIF5BO60841 1220 aaKnown RBP20.92■□□□□ 0.94
PTPN13-204ENST00000436978 A0A0G2JS52 829 aa20.91■□□□□ 0.94
PTPN13-204ENST00000436978 ZBTB7CA1YPR0 619 aa20.9■□□□□ 0.94
PTPN13-204ENST00000436978 KNSTRNQ9Y448 316 aa20.89■□□□□ 0.93
PTPN13-204ENST00000436978 KANK1Q14678 1352 aa20.88■□□□□ 0.93
PTPN13-204ENST00000436978 HAP1P54257 671 aaPredicted RBP20.87■□□□□ 0.93
PTPN13-204ENST00000436978 CCNB3Q8WWL7 1395 aa20.83■□□□□ 0.93
PTPN13-204ENST00000436978 BECN1Q14457 450 aa20.83■□□□□ 0.92
PTPN13-204ENST00000436978 CASC1Q6TDU7 716 aa20.82■□□□□ 0.92
PTPN13-204ENST00000436978 CDK11BP21127 795 aaKnown RBP20.81■□□□□ 0.92
PTPN13-204ENST00000436978 DDRGK1Q96HY6 314 aa20.81■□□□□ 0.92
PTPN13-204ENST00000436978 RGL3Q3MIN7 710 aa20.79■□□□□ 0.92
PTPN13-204ENST00000436978 CARD11Q9BXL7 1154 aa20.77■□□□□ 0.92
PTPN13-204ENST00000436978 CUX2O14529 1486 aa20.77■□□□□ 0.92
PTPN13-204ENST00000436978 MYO15BQ96JP2 1530 aa20.77■□□□□ 0.92
PTPN13-204ENST00000436978 PNNQ9H307 717 aaKnown RBP20.75■□□□□ 0.91
PTPN13-204ENST00000436978 NCLP19338 710 aaKnown RBP20.74■□□□□ 0.91
PTPN13-204ENST00000436978 ARHGAP35Q9NRY4 1499 aa20.74■□□□□ 0.91
PTPN13-204ENST00000436978 FTSJ3Q8IY81 847 aaKnown RBP20.73■□□□□ 0.91
PTPN13-204ENST00000436978 POGKQ9P215 609 aa20.73■□□□□ 0.91
PTPN13-204ENST00000436978 MAPK8IP3Q9UPT6 1336 aa20.73■□□□□ 0.91
PTPN13-204ENST00000436978 HDGFP51858 240 aaKnown RBP20.73■□□□□ 0.91
PTPN13-204ENST00000436978 NUDCQ9Y266 331 aa20.73■□□□□ 0.91
PTPN13-204ENST00000436978 ANP32EQ9BTT0 268 aa20.72■□□□□ 0.91
PTPN13-204ENST00000436978 CHMP4BQ9H444 224 aaKnown RBP20.71■□□□□ 0.91
PTPN13-204ENST00000436978 PDS5BQ9NTI5 1447 aa20.7■□□□□ 0.9
PTPN13-204ENST00000436978 CARMIL2Q6F5E8 1435 aa20.7■□□□□ 0.9
PTPN13-204ENST00000436978 CARMIL1Q5VZK9 1371 aa20.7■□□□□ 0.9
PTPN13-204ENST00000436978 SENP3Q9H4L4 574 aaPredicted RBP20.69■□□□□ 0.9
PTPN13-204ENST00000436978 GOLGA6L22H0YM25 854 aa20.69■□□□□ 0.9
PTPN13-204ENST00000436978 PLEKHG5O94827 1062 aa20.68■□□□□ 0.9
PTPN13-204ENST00000436978 HIRIP3Q9BW71 556 aaPredicted RBP20.68■□□□□ 0.9
PTPN13-204ENST00000436978 PPM1GO15355 546 aaPredicted RBP20.67■□□□□ 0.9
PTPN13-204ENST00000436978 MIER1Q8N108 512 aa20.65■□□□□ 0.9
PTPN13-204ENST00000436978 TOP2AP11388 1531 aaKnown RBP20.65■□□□□ 0.9
PTPN13-204ENST00000436978 WIZO95785 1651 aa20.65■□□□□ 0.9
PTPN13-204ENST00000436978 GLIPR1L2Q4G1C9 344 aa20.63■□□□□ 0.89
PTPN13-204ENST00000436978 MS4A1P11836 297 aa20.62■□□□□ 0.89
PTPN13-204ENST00000436978 NBR1Q14596 966 aa20.61■□□□□ 0.89
PTPN13-204ENST00000436978 CECR2Q9BXF3 1484 aa20.59■□□□□ 0.89
PTPN13-204ENST00000436978 ABCC8Q09428 1581 aa20.59■□□□□ 0.89
PTPN13-204ENST00000436978 CCDC88BA6NC98 1476 aa20.59■□□□□ 0.89
PTPN13-204ENST00000436978 ZRSR1Q15695 479 aaKnown RBP20.59■□□□□ 0.89
PTPN13-204ENST00000436978 ARXQ96QS3 562 aa20.58■□□□□ 0.89
PTPN13-204ENST00000436978 TMF1P82094 1093 aa20.58■□□□□ 0.88
PTPN13-204ENST00000436978 FMN1Q68DA7 1419 aa20.57■□□□□ 0.88
PTPN13-204ENST00000436978 IRX6P78412 446 aaPredicted RBP20.56■□□□□ 0.88
PTPN13-204ENST00000436978 LAS1LQ9Y4W2 734 aaKnown RBP20.55■□□□□ 0.88
PTPN13-204ENST00000436978 NPHP1O15259 732 aa20.54■□□□□ 0.88
PTPN13-204ENST00000436978 MROH2BQ7Z745 1585 aa20.53■□□□□ 0.88
PTPN13-204ENST00000436978 LMOD2Q6P5Q4 547 aa20.52■□□□□ 0.88
PTPN13-204ENST00000436978 SETD5Q9C0A6 1442 aa20.5■□□□□ 0.87
PTPN13-204ENST00000436978 TRIM44Q96DX7 344 aaPredicted RBP20.5■□□□□ 0.87
PTPN13-204ENST00000436978 SOGA1O94964 1423 aa20.5■□□□□ 0.87
PTPN13-204ENST00000436978 VPS8Q8N3P4 1428 aa20.5■□□□□ 0.87
PTPN13-204ENST00000436978 SMARCA4P51532 1647 aa20.48■□□□□ 0.87
PTPN13-204ENST00000436978 TIMELESSQ9UNS1 1208 aa20.48■□□□□ 0.87
PTPN13-204ENST00000436978 TRHP20396 242 aaPredicted RBP20.47■□□□□ 0.87
PTPN13-204ENST00000436978 DCAF11Q8TEB1 546 aa20.46■□□□□ 0.87
PTPN13-204ENST00000436978 EIF3AQ14152 1382 aaKnown RBP20.46■□□□□ 0.87
PTPN13-204ENST00000436978 OS9Q13438 667 aaPredicted RBP20.45■□□□□ 0.86
PTPN13-204ENST00000436978 CC2D1BQ5T0F9 858 aaKnown RBP20.45■□□□□ 0.86
PTPN13-204ENST00000436978 U2SURPO15042 1029 aaKnown RBP20.43■□□□□ 0.86
PTPN13-204ENST00000436978 SRPK2P78362 688 aaKnown RBP20.43■□□□□ 0.86
PTPN13-204ENST00000436978 NEUROD2Q15784 382 aa20.43■□□□□ 0.86
PTPN13-204ENST00000436978 GOLGA2Q08379 1002 aa20.42■□□□□ 0.86
PTPN13-204ENST00000436978 CCDC18Q5T9S5 1454 aa20.42■□□□□ 0.86
PTPN13-204ENST00000436978 CFAP44Q96MT7 982 aa20.41■□□□□ 0.86
PTPN13-204ENST00000436978 TNNT2P45379 298 aaPredicted RBP20.4■□□□□ 0.86
PTPN13-204ENST00000436978 ANKRD30AQ9BXX3 1397 aa20.38■□□□□ 0.85
PTPN13-204ENST00000436978 HDGFL2Q7Z4V5 671 aaPredicted RBP20.37■□□□□ 0.85
PTPN13-204ENST00000436978 FRAT1Q92837 279 aaPredicted RBP20.37■□□□□ 0.85
PTPN13-204ENST00000436978 KTN1Q86UP2 1357 aaKnown RBP20.36■□□□□ 0.85
PTPN13-204ENST00000436978 SUPT16HQ9Y5B9 1047 aaKnown RBP20.36■□□□□ 0.85
PTPN13-204ENST00000436978 GOLGA6L6A8MZA4 724 aa20.36■□□□□ 0.85
PTPN13-204ENST00000436978 MORC1Q86VD1 984 aa20.36■□□□□ 0.85
PTPN13-204ENST00000436978 PRDM2Q13029 1718 aa20.35■□□□□ 0.85
PTPN13-204ENST00000436978 ROCK2O75116 1388 aaKnown RBP20.35■□□□□ 0.85
PTPN13-204ENST00000436978 SIN3AQ96ST3 1273 aa20.35■□□□□ 0.85
PTPN13-204ENST00000436978 PPP4R2Q9NY27 417 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms