RNA–Protein interactions for RNA: ENST00000434839.2

XIST-206, X inactive specific transcript, humanhuman

TSL 5 BASIC

Gene XIST, Length 2,865 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-206ENST00000434839 WASHC2AQ641Q2 1341 aa11.27□□□□□ -0.6
XIST-206ENST00000434839 WASHC2CQ9Y4E1 1318 aa11.27□□□□□ -0.61
XIST-206ENST00000434839 A0A0U1RQG5 324 aaPredicted RBP11.25□□□□□ -0.61
XIST-206ENST00000434839 RBM10P98175 930 aaKnown RBP11.25□□□□□ -0.61
XIST-206ENST00000434839 PAK3O75914 559 aaPredicted RBP11.22□□□□□ -0.61
XIST-206ENST00000434839 SLC4A1APQ9BWU0 796 aaKnown RBP11.22□□□□□ -0.61
XIST-206ENST00000434839 ZCCHC6Q5VYS8 1495 aaKnown RBP11.22□□□□□ -0.61
XIST-206ENST00000434839 USP35Q9P2H5 1018 aa11.22□□□□□ -0.61
XIST-206ENST00000434839 BCL11BQ9C0K0 894 aaPredicted RBP11.18□□□□□ -0.62
XIST-206ENST00000434839 PLCB2Q00722 1185 aa11.17□□□□□ -0.62
XIST-206ENST00000434839 FAM43AQ8N2R8 423 aa11.16□□□□□ -0.62
XIST-206ENST00000434839 BRPF3Q9ULD4 1205 aa11.15□□□□□ -0.62
XIST-206ENST00000434839 RRP9O43818 475 aaKnown RBP11.15□□□□□ -0.62
XIST-206ENST00000434839 TAF7LQ5H9L4 462 aa11.15□□□□□ -0.62
XIST-206ENST00000434839 WRNQ14191 1432 aaPredicted RBP eCLIP11.15□□□□□ -0.63
XIST-206ENST00000434839 IPO9Q96P70 1041 aaKnown RBP11.14□□□□□ -0.63
XIST-206ENST00000434839 NEFMP07197 916 aa11.13□□□□□ -0.63
XIST-206ENST00000434839 ANP32AP39687 249 aaKnown RBP11.13□□□□□ -0.63
XIST-206ENST00000434839 ZBTB47Q9UFB7 747 aaPredicted RBP11.12□□□□□ -0.63
XIST-206ENST00000434839 HAP1P54257 671 aaPredicted RBP11.1□□□□□ -0.63
XIST-206ENST00000434839 HSP90AA2PQ14568 343 aaPredicted RBP11.1□□□□□ -0.63
XIST-206ENST00000434839 KCNH8Q96L42 1107 aa11.1□□□□□ -0.63
XIST-206ENST00000434839 PPP4R2Q9NY27 417 aa11.06□□□□□ -0.64
XIST-206ENST00000434839 HMGXB3Q12766 1538 aa11.06□□□□□ -0.64
XIST-206ENST00000434839 NPM2Q86SE8 214 aaKnown RBP11.04□□□□□ -0.64
XIST-206ENST00000434839 GSE1Q14687 1217 aa11.04□□□□□ -0.64
XIST-206ENST00000434839 PPM1GO15355 546 aaPredicted RBP11.03□□□□□ -0.64
XIST-206ENST00000434839 NCAPD3P42695 1498 aa11.01□□□□□ -0.65
XIST-206ENST00000434839 HSP90AA1P07900 732 aaKnown RBP11.01□□□□□ -0.65
XIST-206ENST00000434839 SMARCA2P51531 1590 aa11□□□□□ -0.65
XIST-206ENST00000434839 CCER2I3L3R5 266 aa10.99□□□□□ -0.65
XIST-206ENST00000434839 CALD1Q05682 793 aaKnown RBP10.99□□□□□ -0.65
XIST-206ENST00000434839 THOC2Q8NI27 1593 aaKnown RBP10.98□□□□□ -0.65
XIST-206ENST00000434839 ZNF326Q5BKZ1 582 aaKnown RBP10.98□□□□□ -0.65
XIST-206ENST00000434839 PEG3Q9GZU2 1588 aa10.97□□□□□ -0.65
XIST-206ENST00000434839 EEA1Q15075 1411 aa10.97□□□□□ -0.65
XIST-206ENST00000434839 TRIM52Q96A61 297 aa10.97□□□□□ -0.65
XIST-206ENST00000434839 CENPJQ9HC77 1338 aaPredicted RBP10.96□□□□□ -0.66
XIST-206ENST00000434839 PRDM4Q9UKN5 801 aa10.95□□□□□ -0.66
XIST-206ENST00000434839 C14orf37Q86TY3 774 aa10.95□□□□□ -0.66
XIST-206ENST00000434839 RSPH4AQ5TD94 716 aa10.94□□□□□ -0.66
XIST-206ENST00000434839 TMEM132AQ24JP5 1023 aa10.93□□□□□ -0.66
XIST-206ENST00000434839 PABPN1Q86U42 306 aaKnown RBP eCLIP10.93□□□□□ -0.66
XIST-206ENST00000434839 LAMC3Q9Y6N6 1575 aa10.93□□□□□ -0.66
XIST-206ENST00000434839 NAP1L2Q9ULW6 460 aaPredicted RBP10.92□□□□□ -0.66
XIST-206ENST00000434839 IRX6P78412 446 aaPredicted RBP10.92□□□□□ -0.66
XIST-206ENST00000434839 LAS1LQ9Y4W2 734 aaKnown RBP10.91□□□□□ -0.66
XIST-206ENST00000434839 FRAT1Q92837 279 aaPredicted RBP10.9□□□□□ -0.66
XIST-206ENST00000434839 NAP1L5Q96NT1 182 aaPredicted RBP10.9□□□□□ -0.66
XIST-206ENST00000434839 ZBTB22O15209 634 aa10.9□□□□□ -0.67
XIST-206ENST00000434839 BBXQ8WY36 941 aaPredicted RBP10.88□□□□□ -0.67
XIST-206ENST00000434839 HNRNPUL2Q1KMD3 747 aaKnown RBP10.87□□□□□ -0.67
XIST-206ENST00000434839 B4GALNT3Q6L9W6 998 aa10.87□□□□□ -0.67
XIST-206ENST00000434839 PNNQ9H307 717 aaKnown RBP10.87□□□□□ -0.67
XIST-206ENST00000434839 RRAGDQ9NQL2 400 aaPredicted RBP10.87□□□□□ -0.67
XIST-206ENST00000434839 PAXIP1Q6ZW49 1069 aaPredicted RBP10.86□□□□□ -0.67
XIST-206ENST00000434839 IPO4Q8TEX9 1081 aaKnown RBP10.86□□□□□ -0.67
XIST-206ENST00000434839 PDCL3Q9H2J4 239 aa10.86□□□□□ -0.67
XIST-206ENST00000434839 SCRIBQ14160 1630 aa10.86□□□□□ -0.67
XIST-206ENST00000434839 DHX57Q6P158 1386 aaKnown RBP10.85□□□□□ -0.67
XIST-206ENST00000434839 RGS3P49796 1198 aa10.84□□□□□ -0.67
XIST-206ENST00000434839 GTF2E1P29083 439 aaPredicted RBP10.84□□□□□ -0.67
XIST-206ENST00000434839 DCAF11Q8TEB1 546 aa10.83□□□□□ -0.68
XIST-206ENST00000434839 BRD2P25440 801 aaKnown RBP10.83□□□□□ -0.68
XIST-206ENST00000434839 CANXP27824 592 aaKnown RBP10.83□□□□□ -0.68
XIST-206ENST00000434839 CEP162Q5TB80 1403 aa10.83□□□□□ -0.68
XIST-206ENST00000434839 ANP32CO43423 234 aa10.83□□□□□ -0.68
XIST-206ENST00000434839 CHMP4BQ9H444 224 aaKnown RBP10.82□□□□□ -0.68
XIST-206ENST00000434839 CLCN1P35523 988 aa10.81□□□□□ -0.68
XIST-206ENST00000434839 NFKBIBQ15653 356 aa10.81□□□□□ -0.68
XIST-206ENST00000434839 NCLP19338 710 aaKnown RBP10.8□□□□□ -0.68
XIST-206ENST00000434839 CNGB1Q14028 1251 aaPredicted RBP10.8□□□□□ -0.68
XIST-206ENST00000434839 DDX10Q13206 875 aaKnown RBP10.79□□□□□ -0.68
XIST-206ENST00000434839 STAC3Q96MF2 364 aa10.79□□□□□ -0.68
XIST-206ENST00000434839 PPP1R15AO75807 674 aaPredicted RBP10.79□□□□□ -0.68
XIST-206ENST00000434839 TPM2P07951 284 aa10.77□□□□□ -0.69
XIST-206ENST00000434839 HNRNPUQ00839 825 aaKnown RBP eCLIP10.77□□□□□ -0.691e-6■■□□□ 14.1
XIST-206ENST00000434839 DDRGK1Q96HY6 314 aa10.77□□□□□ -0.69
XIST-206ENST00000434839 WDR62O43379 1518 aa10.77□□□□□ -0.69
XIST-206ENST00000434839 FBXO3Q9UK99 471 aa10.75□□□□□ -0.69
XIST-206ENST00000434839 KDM2AQ9Y2K7 1162 aa10.75□□□□□ -0.69
XIST-206ENST00000434839 L1TD1Q5T7N2 865 aaKnown RBP10.74□□□□□ -0.69
XIST-206ENST00000434839 TNIKQ9UKE5 1360 aa10.73□□□□□ -0.69
XIST-206ENST00000434839 ADRA2BP18089 450 aa10.73□□□□□ -0.69
XIST-206ENST00000434839 SMAP1Q8IYB5 467 aaPredicted RBP10.73□□□□□ -0.69
XIST-206ENST00000434839 ERCC6Q03468 1493 aa10.71□□□□□ -0.69
XIST-206ENST00000434839 ATAD2BQ9ULI0 1458 aa10.71□□□□□ -0.7
XIST-206ENST00000434839 UBTFP17480 764 aaKnown RBP10.7□□□□□ -0.7
XIST-206ENST00000434839 MAP7D2Q96T17 732 aa10.7□□□□□ -0.7
XIST-206ENST00000434839 FTSJ3Q8IY81 847 aaKnown RBP10.7□□□□□ -0.7
XIST-206ENST00000434839 CHMP4AQ9BY43 222 aa10.7□□□□□ -0.7
XIST-206ENST00000434839 SMARCA4P51532 1647 aa10.7□□□□□ -0.7
XIST-206ENST00000434839 TCERG1O14776 1098 aaKnown RBP10.69□□□□□ -0.7
XIST-206ENST00000434839 DHX37Q8IY37 1157 aaKnown RBP10.68□□□□□ -0.7
XIST-206ENST00000434839 FBLN2P98095 1184 aa10.68□□□□□ -0.7
XIST-206ENST00000434839 TEX2Q8IWB9 1127 aa10.68□□□□□ -0.7
XIST-206ENST00000434839 UTP14CQ5TAP6 766 aaKnown RBP10.67□□□□□ -0.7
XIST-206ENST00000434839 ZFP91Q96JP5 570 aaPredicted RBP10.66□□□□□ -0.7
XIST-206ENST00000434839 ARID4BQ4LE39 1312 aaPredicted RBP10.66□□□□□ -0.7
XIST-206ENST00000434839 MS4A1P11836 297 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms