RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 CCDC61Q9Y6R9 512 aa16.83■□□□□ 0.28
PTPRK-212ENST00000434424 PELP1Q8IZL8 1130 aaKnown RBP16.81■□□□□ 0.28
PTPRK-212ENST00000434424 RASEFQ8IZ41 740 aa16.75■□□□□ 0.27
PTPRK-212ENST00000434424 POTEB2H3BUK9 544 aa16.74■□□□□ 0.27
PTPRK-212ENST00000434424 PLEKHG5O94827 1062 aa16.73■□□□□ 0.27
PTPRK-212ENST00000434424 ASTLQ6HA08 431 aaPredicted RBP16.72■□□□□ 0.27
PTPRK-212ENST00000434424 KIF12Q96FN5 646 aa16.72■□□□□ 0.27
PTPRK-212ENST00000434424 ATMINO43313 823 aaPredicted RBP16.7■□□□□ 0.26
PTPRK-212ENST00000434424 PLCD3Q8N3E9 789 aa16.69■□□□□ 0.26
PTPRK-212ENST00000434424 OTUD5Q96G74 571 aa16.64■□□□□ 0.25
PTPRK-212ENST00000434424 TRPC6Q9Y210 931 aa16.62■□□□□ 0.25
PTPRK-212ENST00000434424 MAP3K13O43283 966 aa16.61■□□□□ 0.25
PTPRK-212ENST00000434424 NUBP1P53384 320 aa16.6■□□□□ 0.25
PTPRK-212ENST00000434424 METRNQ9UJH8 293 aa16.59■□□□□ 0.25
PTPRK-212ENST00000434424 ATN1P54259 1190 aaPredicted RBP16.57■□□□□ 0.24
PTPRK-212ENST00000434424 SLC39A7Q92504 469 aa16.55■□□□□ 0.24
PTPRK-212ENST00000434424 C7P10643 843 aa16.54■□□□□ 0.24
PTPRK-212ENST00000434424 BMP2KQ9NSY1 1161 aaPredicted RBP16.54■□□□□ 0.24
PTPRK-212ENST00000434424 POTEJP0CG39 1038 aa16.52■□□□□ 0.24
PTPRK-212ENST00000434424 ZBTB47Q9UFB7 747 aaPredicted RBP16.52■□□□□ 0.24
PTPRK-212ENST00000434424 TIE1P35590 1138 aa16.45■□□□□ 0.22
PTPRK-212ENST00000434424 POTEFA5A3E0 1075 aa16.43■□□□□ 0.22
PTPRK-212ENST00000434424 TTLL13PA6NNM8 815 aa16.4■□□□□ 0.22
PTPRK-212ENST00000434424 SGIP1Q9BQI5 828 aa16.4■□□□□ 0.22
PTPRK-212ENST00000434424 PCDHB13Q9Y5F0 798 aa16.4■□□□□ 0.22
PTPRK-212ENST00000434424 FAM212AQ96EL1 285 aa16.38■□□□□ 0.21
PTPRK-212ENST00000434424 FBXO3Q9UK99 471 aa16.38■□□□□ 0.21
PTPRK-212ENST00000434424 IFNL1Q8IU54 200 aa16.36■□□□□ 0.21
PTPRK-212ENST00000434424 COLQQ9Y215 455 aaPredicted RBP16.31■□□□□ 0.2
PTPRK-212ENST00000434424 TRIM35Q9UPQ4 493 aa16.28■□□□□ 0.2
PTPRK-212ENST00000434424 VASPP50552 380 aaPredicted RBP16.26■□□□□ 0.19
PTPRK-212ENST00000434424 MAMSTRQ6ZN01 415 aa16.26■□□□□ 0.19
PTPRK-212ENST00000434424 DCAF8Q5TAQ9 597 aa16.25■□□□□ 0.19
PTPRK-212ENST00000434424 PYGBP11216 843 aa16.23■□□□□ 0.19
PTPRK-212ENST00000434424 TMEM106CQ9BVX2 250 aa16.21■□□□□ 0.19
PTPRK-212ENST00000434424 SEC24BO95487 1268 aa16.19■□□□□ 0.18
PTPRK-212ENST00000434424 IER5LQ5T953 404 aa16.19■□□□□ 0.18
PTPRK-212ENST00000434424 SCUBE2Q9NQ36 999 aa16.18■□□□□ 0.18
PTPRK-212ENST00000434424 POTEMA6NI47 508 aa16.14■□□□□ 0.17
PTPRK-212ENST00000434424 KLHL34Q8N239 644 aa16.14■□□□□ 0.17
PTPRK-212ENST00000434424 LCE2DQ5TA82 110 aaPredicted RBP16.13■□□□□ 0.17
PTPRK-212ENST00000434424 PCDHB8Q9UN66 801 aa16.13■□□□□ 0.17
PTPRK-212ENST00000434424 POTEGQ6S5H5 508 aa16.11■□□□□ 0.17
PTPRK-212ENST00000434424 IRX5P78411 483 aaPredicted RBP16.06■□□□□ 0.16
PTPRK-212ENST00000434424 GSE1Q14687 1217 aa16.04■□□□□ 0.16
PTPRK-212ENST00000434424 IFNLR1Q8IU57 520 aaPredicted RBP16.02■□□□□ 0.16
PTPRK-212ENST00000434424 FAM163AQ96GL9 167 aaPredicted RBP16.02■□□□□ 0.16
PTPRK-212ENST00000434424 PLSCR2Q9NRY7 297 aa16.01■□□□□ 0.15
PTPRK-212ENST00000434424 PLCG2P16885 1265 aa16■□□□□ 0.15
PTPRK-212ENST00000434424 CHRM1P11229 460 aaPredicted RBP15.98■□□□□ 0.15
PTPRK-212ENST00000434424 PLCB2Q00722 1185 aa15.97■□□□□ 0.15
PTPRK-212ENST00000434424 ZNF467Q7Z7K2 595 aaPredicted RBP15.94■□□□□ 0.14
PTPRK-212ENST00000434424 OCEL1Q9H607 264 aa15.94■□□□□ 0.14
PTPRK-212ENST00000434424 SPOCK2Q92563 424 aa15.91■□□□□ 0.14
PTPRK-212ENST00000434424 SLAIN1Q8ND83 568 aa15.89■□□□□ 0.13
PTPRK-212ENST00000434424 PSEN1P49768 467 aa15.84■□□□□ 0.13
PTPRK-212ENST00000434424 PDCD7Q8N8D1 485 aaKnown RBP15.84■□□□□ 0.13
PTPRK-212ENST00000434424 CIZ1Q9ULV3 898 aaPredicted RBP15.82■□□□□ 0.12
PTPRK-212ENST00000434424 PCDH10Q9P2E7 1040 aa15.81■□□□□ 0.12
PTPRK-212ENST00000434424 HAP1P54257 671 aaPredicted RBP15.77■□□□□ 0.12
PTPRK-212ENST00000434424 MKRN3Q13064 507 aaKnown RBP15.76■□□□□ 0.11
PTPRK-212ENST00000434424 ST18O60284 1047 aa15.75■□□□□ 0.11
PTPRK-212ENST00000434424 DCAF8L2P0C7V8 631 aa15.75■□□□□ 0.11
PTPRK-212ENST00000434424 PDAP1Q13442 181 aaKnown RBP15.75■□□□□ 0.11
PTPRK-212ENST00000434424 GOLGA2Q08379 1002 aa15.73■□□□□ 0.11
PTPRK-212ENST00000434424 ILDR1Q86SU0 546 aaPredicted RBP15.71■□□□□ 0.11
PTPRK-212ENST00000434424 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.71■□□□□ 0.112e-18■■■□□ 16.8
PTPRK-212ENST00000434424 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.71■□□□□ 0.11
PTPRK-212ENST00000434424 CABP2Q9NPB3 220 aa15.65■□□□□ 0.1
PTPRK-212ENST00000434424 DPY19L2Q6NUT2 758 aa15.64■□□□□ 0.09
PTPRK-212ENST00000434424 L3MBTL3Q96JM7 780 aaPredicted RBP15.63■□□□□ 0.09
PTPRK-212ENST00000434424 BCANQ96GW7 911 aa15.62■□□□□ 0.09
PTPRK-212ENST00000434424 CDAN1Q8IWY9 1227 aa15.61■□□□□ 0.09
PTPRK-212ENST00000434424 C3orf67Q6ZVT6 689 aa15.59■□□□□ 0.09
PTPRK-212ENST00000434424 PKD2Q13563 968 aa15.57■□□□□ 0.08
PTPRK-212ENST00000434424 TRIM41Q8WV44 630 aa15.56■□□□□ 0.08
PTPRK-212ENST00000434424 VSIG10Q8N0Z9 540 aa15.55■□□□□ 0.08
PTPRK-212ENST00000434424 SNPHO15079 494 aa15.54■□□□□ 0.08
PTPRK-212ENST00000434424 TMEM121BQ9BXQ6 578 aaPredicted RBP15.53■□□□□ 0.08
PTPRK-212ENST00000434424 RNF25Q96BH1 459 aaPredicted RBP15.5■□□□□ 0.07
PTPRK-212ENST00000434424 EFCAB3Q8N7B9 438 aa15.49■□□□□ 0.07
PTPRK-212ENST00000434424 MARVELD3Q96A59 401 aa15.49■□□□□ 0.07
PTPRK-212ENST00000434424 BOLA1Q9Y3E2 137 aa15.48■□□□□ 0.07
PTPRK-212ENST00000434424 RIOK3O14730 519 aaKnown RBP15.42■□□□□ 0.06
PTPRK-212ENST00000434424 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.42■□□□□ 0.06
PTPRK-212ENST00000434424 PRKCSHP14314 528 aaPredicted RBP15.39■□□□□ 0.05
PTPRK-212ENST00000434424 TAOK2Q9UL54 1235 aa15.39■□□□□ 0.05
PTPRK-212ENST00000434424 BBXQ8WY36 941 aaPredicted RBP15.38■□□□□ 0.05
PTPRK-212ENST00000434424 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.37■□□□□ 0.05
PTPRK-212ENST00000434424 ZFP91Q96JP5 570 aaPredicted RBP15.37■□□□□ 0.05
PTPRK-212ENST00000434424 G3V3G9 751 aa15.35■□□□□ 0.05
PTPRK-212ENST00000434424 HOXB3P14651 431 aaPredicted RBP15.35■□□□□ 0.05
PTPRK-212ENST00000434424 POTEB3A0JP26 581 aa15.33■□□□□ 0.04
PTPRK-212ENST00000434424 ECM2O94769 699 aaPredicted RBP15.33■□□□□ 0.04
PTPRK-212ENST00000434424 POTEBQ6S5H4 581 aa15.33■□□□□ 0.04
PTPRK-212ENST00000434424 VGFO15240 615 aaPredicted RBP15.32■□□□□ 0.04
PTPRK-212ENST00000434424 EMP3P54852 163 aa15.32■□□□□ 0.04
PTPRK-212ENST00000434424 MS4A4AQ96JQ5 239 aa15.32■□□□□ 0.04
PTPRK-212ENST00000434424 SOX12O15370 315 aa15.29■□□□□ 0.04
PTPRK-212ENST00000434424 PAXIP1Q6ZW49 1069 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms