RNA–Protein interactions for RNA: ENST00000434192.2

GTF2A1-202, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2A1, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-202ENST00000434192 VASPP50552 380 aaPredicted RBP13.31□□□□□ -0.28
GTF2A1-202ENST00000434192 TSPYL2Q9H2G4 693 aaPredicted RBP13.29□□□□□ -0.28
GTF2A1-202ENST00000434192 ZBTB47Q9UFB7 747 aaPredicted RBP13.29□□□□□ -0.28
GTF2A1-202ENST00000434192 ZNF579Q8NAF0 562 aaKnown RBP13.27□□□□□ -0.29
GTF2A1-202ENST00000434192 RASEFQ8IZ41 740 aa13.24□□□□□ -0.29
GTF2A1-202ENST00000434192 PHF12Q96QT6 1004 aa13.24□□□□□ -0.29
GTF2A1-202ENST00000434192 KLHL34Q8N239 644 aa13.21□□□□□ -0.29
GTF2A1-202ENST00000434192 NUBP1P53384 320 aa13.19□□□□□ -0.3
GTF2A1-202ENST00000434192 BICRAQ9NZM4 1560 aa13.16□□□□□ -0.3
GTF2A1-202ENST00000434192 CLCN6P51797 869 aa13.16□□□□□ -0.3
GTF2A1-202ENST00000434192 GALR2O43603 387 aaPredicted RBP13.14□□□□□ -0.31
GTF2A1-202ENST00000434192 DCAF8L2P0C7V8 631 aa13.14□□□□□ -0.31
GTF2A1-202ENST00000434192 CCDC61Q9Y6R9 512 aa13.14□□□□□ -0.31
GTF2A1-202ENST00000434192 IFNLR1Q8IU57 520 aaPredicted RBP13.11□□□□□ -0.31
GTF2A1-202ENST00000434192 FAM212AQ96EL1 285 aa13.09□□□□□ -0.31
GTF2A1-202ENST00000434192 SCRIBQ14160 1630 aa13.07□□□□□ -0.32
GTF2A1-202ENST00000434192 DCAF8Q5TAQ9 597 aa13.07□□□□□ -0.32
GTF2A1-202ENST00000434192 MS4A3Q96HJ5 214 aa13.06□□□□□ -0.32
GTF2A1-202ENST00000434192 DCBLD2Q96PD2 775 aa13.06□□□□□ -0.32
GTF2A1-202ENST00000434192 POTEIP0CG38 1075 aa13.05□□□□□ -0.32
GTF2A1-202ENST00000434192 KIF12Q96FN5 646 aa13.05□□□□□ -0.32
GTF2A1-202ENST00000434192 SHROOM4Q9ULL8 1493 aa13.03□□□□□ -0.32
GTF2A1-202ENST00000434192 MAP3K13O43283 966 aa13.02□□□□□ -0.33
GTF2A1-202ENST00000434192 SPOCK2Q92563 424 aa13□□□□□ -0.33
GTF2A1-202ENST00000434192 PYGBP11216 843 aa12.95□□□□□ -0.34
GTF2A1-202ENST00000434192 PCDHB13Q9Y5F0 798 aa12.94□□□□□ -0.34
GTF2A1-202ENST00000434192 GSE1Q14687 1217 aa12.93□□□□□ -0.34
GTF2A1-202ENST00000434192 TRPC6Q9Y210 931 aa12.92□□□□□ -0.34
GTF2A1-202ENST00000434192 CIZ1Q9ULV3 898 aaPredicted RBP12.91□□□□□ -0.34
GTF2A1-202ENST00000434192 IFNL1Q8IU54 200 aa12.87□□□□□ -0.35
GTF2A1-202ENST00000434192 SGIP1Q9BQI5 828 aa12.87□□□□□ -0.35
GTF2A1-202ENST00000434192 ATMINO43313 823 aaPredicted RBP12.85□□□□□ -0.35
GTF2A1-202ENST00000434192 PELP1Q8IZL8 1130 aaKnown RBP12.85□□□□□ -0.35
GTF2A1-202ENST00000434192 ASTLQ6HA08 431 aaPredicted RBP12.84□□□□□ -0.35
GTF2A1-202ENST00000434192 BMP2KQ9NSY1 1161 aaPredicted RBP12.83□□□□□ -0.36
GTF2A1-202ENST00000434192 ATN1P54259 1190 aaPredicted RBP12.81□□□□□ -0.36
GTF2A1-202ENST00000434192 PCDHB8Q9UN66 801 aa12.81□□□□□ -0.36
GTF2A1-202ENST00000434192 EIF4G1Q04637 1599 aaKnown RBP12.81□□□□□ -0.36
GTF2A1-202ENST00000434192 TIE1P35590 1138 aa12.8□□□□□ -0.36
GTF2A1-202ENST00000434192 CC2D2AQ9P2K1 1620 aa12.8□□□□□ -0.36
GTF2A1-202ENST00000434192 TTLL13PA6NNM8 815 aa12.77□□□□□ -0.37
GTF2A1-202ENST00000434192 LHX8Q68G74 356 aa12.77□□□□□ -0.37
GTF2A1-202ENST00000434192 CHRM1P11229 460 aaPredicted RBP12.76□□□□□ -0.37
GTF2A1-202ENST00000434192 TMEM106CQ9BVX2 250 aa12.74□□□□□ -0.37
GTF2A1-202ENST00000434192 ZNF467Q7Z7K2 595 aaPredicted RBP12.72□□□□□ -0.37
GTF2A1-202ENST00000434192 METRNQ9UJH8 293 aa12.72□□□□□ -0.37
GTF2A1-202ENST00000434192 SLC39A7Q92504 469 aa12.71□□□□□ -0.37
GTF2A1-202ENST00000434192 TRIM35Q9UPQ4 493 aa12.7□□□□□ -0.38
GTF2A1-202ENST00000434192 C7P10643 843 aa12.69□□□□□ -0.38
GTF2A1-202ENST00000434192 TRIM41Q8WV44 630 aa12.66□□□□□ -0.38
GTF2A1-202ENST00000434192 POTEB2H3BUK9 544 aa12.64□□□□□ -0.39
GTF2A1-202ENST00000434192 CECR2Q9BXF3 1484 aa12.62□□□□□ -0.39
GTF2A1-202ENST00000434192 PSEN1P49768 467 aa12.62□□□□□ -0.39
GTF2A1-202ENST00000434192 POTEFA5A3E0 1075 aa12.59□□□□□ -0.39
GTF2A1-202ENST00000434192 SEC24BO95487 1268 aa12.59□□□□□ -0.39
GTF2A1-202ENST00000434192 PDAP1Q13442 181 aaKnown RBP12.59□□□□□ -0.39
GTF2A1-202ENST00000434192 COLQQ9Y215 455 aaPredicted RBP12.58□□□□□ -0.4
GTF2A1-202ENST00000434192 IER5LQ5T953 404 aa12.57□□□□□ -0.4
GTF2A1-202ENST00000434192 RNF25Q96BH1 459 aaPredicted RBP12.55□□□□□ -0.4
GTF2A1-202ENST00000434192 SMARCA4P51532 1647 aa12.53□□□□□ -0.4
GTF2A1-202ENST00000434192 ECM2O94769 699 aaPredicted RBP12.53□□□□□ -0.4
GTF2A1-202ENST00000434192 GOLGA2Q08379 1002 aa12.53□□□□□ -0.4
GTF2A1-202ENST00000434192 PKD2Q13563 968 aa12.53□□□□□ -0.4
GTF2A1-202ENST00000434192 RIOK3O14730 519 aaKnown RBP12.52□□□□□ -0.41
GTF2A1-202ENST00000434192 POTEJP0CG39 1038 aa12.52□□□□□ -0.41
GTF2A1-202ENST00000434192 PLCG2P16885 1265 aa12.5□□□□□ -0.41
GTF2A1-202ENST00000434192 OTUD5Q96G74 571 aa12.5□□□□□ -0.41
GTF2A1-202ENST00000434192 MKRN3Q13064 507 aaKnown RBP12.49□□□□□ -0.41
GTF2A1-202ENST00000434192 CABP2Q9NPB3 220 aa12.49□□□□□ -0.41
GTF2A1-202ENST00000434192 IRX5P78411 483 aaPredicted RBP12.48□□□□□ -0.41
GTF2A1-202ENST00000434192 BAZ1AQ9NRL2 1556 aaPredicted RBP12.47□□□□□ -0.41
GTF2A1-202ENST00000434192 OCEL1Q9H607 264 aa12.45□□□□□ -0.42
GTF2A1-202ENST00000434192 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.44□□□□□ -0.42
GTF2A1-202ENST00000434192 VGFO15240 615 aaPredicted RBP12.44□□□□□ -0.42
GTF2A1-202ENST00000434192 ZFP91Q96JP5 570 aaPredicted RBP12.44□□□□□ -0.42
GTF2A1-202ENST00000434192 SMARCA2P51531 1590 aa12.43□□□□□ -0.42
GTF2A1-202ENST00000434192 RGL2O15211 777 aa12.42□□□□□ -0.42
GTF2A1-202ENST00000434192 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.42□□□□□ -0.429e-7■■■■■ 42.6
GTF2A1-202ENST00000434192 HMGXB3Q12766 1538 aa12.42□□□□□ -0.42
GTF2A1-202ENST00000434192 MAMSTRQ6ZN01 415 aa12.41□□□□□ -0.42
GTF2A1-202ENST00000434192 PEG3Q9GZU2 1588 aa12.41□□□□□ -0.42
GTF2A1-202ENST00000434192 SCUBE2Q9NQ36 999 aa12.39□□□□□ -0.43
GTF2A1-202ENST00000434192 EFCAB3Q8N7B9 438 aa12.38□□□□□ -0.43
GTF2A1-202ENST00000434192 MROH2BQ7Z745 1585 aa12.38□□□□□ -0.43
GTF2A1-202ENST00000434192 PDCD7Q8N8D1 485 aaKnown RBP12.37□□□□□ -0.43
GTF2A1-202ENST00000434192 NCAPD3P42695 1498 aa12.36□□□□□ -0.43
GTF2A1-202ENST00000434192 ATAD2BQ9ULI0 1458 aa12.36□□□□□ -0.43
GTF2A1-202ENST00000434192 TAOK2Q9UL54 1235 aa12.36□□□□□ -0.43
GTF2A1-202ENST00000434192 BCL11BQ9C0K0 894 aaPredicted RBP12.34□□□□□ -0.43
GTF2A1-202ENST00000434192 STK24Q9Y6E0 443 aa12.33□□□□□ -0.44
GTF2A1-202ENST00000434192 RSF1Q96T23 1441 aaPredicted RBP12.32□□□□□ -0.44
GTF2A1-202ENST00000434192 WIZO95785 1651 aa12.32□□□□□ -0.44
GTF2A1-202ENST00000434192 STK25O00506 426 aa12.31□□□□□ -0.44
GTF2A1-202ENST00000434192 DPY19L2Q6NUT2 758 aa12.31□□□□□ -0.44
GTF2A1-202ENST00000434192 ILDR1Q86SU0 546 aaPredicted RBP12.29□□□□□ -0.44
GTF2A1-202ENST00000434192 BAZ1BQ9UIG0 1483 aaKnown RBP12.28□□□□□ -0.44
GTF2A1-202ENST00000434192 L3MBTL3Q96JM7 780 aaPredicted RBP12.26□□□□□ -0.45
GTF2A1-202ENST00000434192 SOX12O15370 315 aa12.24□□□□□ -0.45
GTF2A1-202ENST00000434192 SLAIN1Q8ND83 568 aa12.24□□□□□ -0.45
GTF2A1-202ENST00000434192 PHF8Q9UPP1 1060 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 489 ms