RNA–Protein interactions for RNA: ENST00000432945.1

HMGN1P33-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 33, humanhuman

BASIC

Gene HMGN1P33, Length 451 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P33-201ENST00000432945 FKBP8Q14318 412 aa4.31□□□□□ -1.72
HMGN1P33-201ENST00000432945 SLC39A7Q92504 469 aa4.31□□□□□ -1.72
HMGN1P33-201ENST00000432945 POTEIP0CG38 1075 aa4.3□□□□□ -1.72
HMGN1P33-201ENST00000432945 C7P10643 843 aa4.3□□□□□ -1.72
HMGN1P33-201ENST00000432945 MAMSTRQ6ZN01 415 aa4.3□□□□□ -1.72
HMGN1P33-201ENST00000432945 FAM212AQ96EL1 285 aa4.3□□□□□ -1.72
HMGN1P33-201ENST00000432945 SGIP1Q9BQI5 828 aa4.3□□□□□ -1.72
HMGN1P33-201ENST00000432945 CCDC61Q9Y6R9 512 aa4.29□□□□□ -1.72
HMGN1P33-201ENST00000432945 ASTLQ6HA08 431 aaPredicted RBP4.28□□□□□ -1.72
HMGN1P33-201ENST00000432945 MS4A3Q96HJ5 214 aa4.28□□□□□ -1.72
HMGN1P33-201ENST00000432945 TIE1P35590 1138 aa4.27□□□□□ -1.73
HMGN1P33-201ENST00000432945 METRNQ9UJH8 293 aa4.27□□□□□ -1.73
HMGN1P33-201ENST00000432945 ATMINO43313 823 aaPredicted RBP4.26□□□□□ -1.73
HMGN1P33-201ENST00000432945 KIF12Q96FN5 646 aa4.26□□□□□ -1.73
HMGN1P33-201ENST00000432945 SCUBE2Q9NQ36 999 aa4.26□□□□□ -1.73
HMGN1P33-201ENST00000432945 SOCS7O14512 581 aa4.25□□□□□ -1.73
HMGN1P33-201ENST00000432945 IER5LQ5T953 404 aa4.24□□□□□ -1.73
HMGN1P33-201ENST00000432945 RASEFQ8IZ41 740 aa4.24□□□□□ -1.73
HMGN1P33-201ENST00000432945 PCDHB13Q9Y5F0 798 aa4.24□□□□□ -1.73
HMGN1P33-201ENST00000432945 MAP3K13O43283 966 aa4.23□□□□□ -1.73
HMGN1P33-201ENST00000432945 SEC24BO95487 1268 aa4.23□□□□□ -1.73
HMGN1P33-201ENST00000432945 GSE1Q14687 1217 aa4.22□□□□□ -1.73
HMGN1P33-201ENST00000432945 KLHL34Q8N239 644 aa4.22□□□□□ -1.73
HMGN1P33-201ENST00000432945 NUBP1P53384 320 aa4.21□□□□□ -1.74
HMGN1P33-201ENST00000432945 BMP2KQ9NSY1 1161 aaPredicted RBP4.21□□□□□ -1.74
HMGN1P33-201ENST00000432945 ATN1P54259 1190 aaPredicted RBP4.2□□□□□ -1.74
HMGN1P33-201ENST00000432945 DCAF8Q5TAQ9 597 aa4.2□□□□□ -1.74
HMGN1P33-201ENST00000432945 TTLL13PA6NNM8 815 aa4.19□□□□□ -1.74
HMGN1P33-201ENST00000432945 VASPP50552 380 aaPredicted RBP4.19□□□□□ -1.74
HMGN1P33-201ENST00000432945 GOLGA2Q08379 1002 aa4.19□□□□□ -1.74
HMGN1P33-201ENST00000432945 ZNF467Q7Z7K2 595 aaPredicted RBP4.19□□□□□ -1.74
HMGN1P33-201ENST00000432945 PELP1Q8IZL8 1130 aaKnown RBP4.19□□□□□ -1.74
HMGN1P33-201ENST00000432945 OTUD5Q96G74 571 aa4.19□□□□□ -1.74
HMGN1P33-201ENST00000432945 PCDH10Q9P2E7 1040 aa4.19□□□□□ -1.74
HMGN1P33-201ENST00000432945 PLCG2P16885 1265 aa4.18□□□□□ -1.74
HMGN1P33-201ENST00000432945 TRIM35Q9UPQ4 493 aa4.18□□□□□ -1.74
HMGN1P33-201ENST00000432945 TMEM106CQ9BVX2 250 aa4.17□□□□□ -1.74
HMGN1P33-201ENST00000432945 IFNL1Q8IU54 200 aa4.16□□□□□ -1.74
HMGN1P33-201ENST00000432945 TRIM41Q8WV44 630 aa4.15□□□□□ -1.75
HMGN1P33-201ENST00000432945 POTEMA6NI47 508 aa4.14□□□□□ -1.75
HMGN1P33-201ENST00000432945 POTEB2H3BUK9 544 aa4.14□□□□□ -1.75
HMGN1P33-201ENST00000432945 PYGBP11216 843 aa4.14□□□□□ -1.75
HMGN1P33-201ENST00000432945 SNPHO15079 494 aa4.13□□□□□ -1.75
HMGN1P33-201ENST00000432945 CHRM1P11229 460 aaPredicted RBP4.13□□□□□ -1.75
HMGN1P33-201ENST00000432945 MKRN3Q13064 507 aaKnown RBP4.13□□□□□ -1.75
HMGN1P33-201ENST00000432945 SPOCK2Q92563 424 aa4.13□□□□□ -1.75
HMGN1P33-201ENST00000432945 OCEL1Q9H607 264 aa4.13□□□□□ -1.75
HMGN1P33-201ENST00000432945 TRPC6Q9Y210 931 aa4.13□□□□□ -1.75
HMGN1P33-201ENST00000432945 LMTK3Q96Q04 1460 aa4.12□□□□□ -1.75
HMGN1P33-201ENST00000432945 G3V3G9 751 aa4.12□□□□□ -1.75
HMGN1P33-201ENST00000432945 POTEGQ6S5H5 508 aa4.12□□□□□ -1.75
HMGN1P33-201ENST00000432945 C3orf67Q6ZVT6 689 aa4.11□□□□□ -1.75
HMGN1P33-201ENST00000432945 L3MBTL3Q96JM7 780 aaPredicted RBP4.11□□□□□ -1.75
HMGN1P33-201ENST00000432945 PLSCR2Q9NRY7 297 aa4.11□□□□□ -1.75
HMGN1P33-201ENST00000432945 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.11□□□□□ -1.75
HMGN1P33-201ENST00000432945 PDAP1Q13442 181 aaKnown RBP4.1□□□□□ -1.75
HMGN1P33-201ENST00000432945 SLAIN1Q8ND83 568 aa4.1□□□□□ -1.75
HMGN1P33-201ENST00000432945 FAM163AQ96GL9 167 aaPredicted RBP4.1□□□□□ -1.75
HMGN1P33-201ENST00000432945 CIZ1Q9ULV3 898 aaPredicted RBP4.1□□□□□ -1.75
HMGN1P33-201ENST00000432945 COLQQ9Y215 455 aaPredicted RBP4.1□□□□□ -1.75
HMGN1P33-201ENST00000432945 IRX5P78411 483 aaPredicted RBP4.09□□□□□ -1.75
HMGN1P33-201ENST00000432945 TAOK2Q9UL54 1235 aa4.09□□□□□ -1.75
HMGN1P33-201ENST00000432945 PCDHB8Q9UN66 801 aa4.09□□□□□ -1.75
HMGN1P33-201ENST00000432945 POTEFA5A3E0 1075 aa4.08□□□□□ -1.76
HMGN1P33-201ENST00000432945 POTEJP0CG39 1038 aa4.08□□□□□ -1.76
HMGN1P33-201ENST00000432945 PSEN1P49768 467 aa4.08□□□□□ -1.76
HMGN1P33-201ENST00000432945 TMEM121BQ9BXQ6 578 aaPredicted RBP4.08□□□□□ -1.76
HMGN1P33-201ENST00000432945 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.06□□□□□ -1.76
HMGN1P33-201ENST00000432945 IFNLR1Q8IU57 520 aaPredicted RBP4.05□□□□□ -1.76
HMGN1P33-201ENST00000432945 CABP2Q9NPB3 220 aa4.03□□□□□ -1.76
HMGN1P33-201ENST00000432945 RIMBP2O15034 1052 aa4.02□□□□□ -1.77
HMGN1P33-201ENST00000432945 PDCD7Q8N8D1 485 aaKnown RBP4.01□□□□□ -1.77
HMGN1P33-201ENST00000432945 RIOK3O14730 519 aaKnown RBP4□□□□□ -1.77
HMGN1P33-201ENST00000432945 VGFO15240 615 aaPredicted RBP4□□□□□ -1.77
HMGN1P33-201ENST00000432945 ST18O60284 1047 aa4□□□□□ -1.77
HMGN1P33-201ENST00000432945 CDAN1Q8IWY9 1227 aa4□□□□□ -1.77
HMGN1P33-201ENST00000432945 BOLA1Q9Y3E2 137 aa4□□□□□ -1.77
HMGN1P33-201ENST00000432945 SOX12O15370 315 aa3.99□□□□□ -1.77
HMGN1P33-201ENST00000432945 DOK7Q18PE1 504 aa3.99□□□□□ -1.77
HMGN1P33-201ENST00000432945 EMP3P54852 163 aa3.98□□□□□ -1.77
HMGN1P33-201ENST00000432945 LCE2DQ5TA82 110 aaPredicted RBP3.98□□□□□ -1.77
HMGN1P33-201ENST00000432945 ILDR2Q71H61 639 aa3.98□□□□□ -1.77
HMGN1P33-201ENST00000432945 ZNF710Q8N1W2 664 aa3.98□□□□□ -1.77
HMGN1P33-201ENST00000432945 NLRP6P59044 892 aa3.95□□□□□ -1.78
HMGN1P33-201ENST00000432945 ZSWIM6Q9HCJ5 1215 aa3.95□□□□□ -1.78
HMGN1P33-201ENST00000432945 EFCAB3Q8N7B9 438 aa3.94□□□□□ -1.78
HMGN1P33-201ENST00000432945 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.93□□□□□ -1.78
HMGN1P33-201ENST00000432945 IFFO2Q5TF58 517 aa3.93□□□□□ -1.78
HMGN1P33-201ENST00000432945 MARVELD3Q96A59 401 aa3.93□□□□□ -1.78
HMGN1P33-201ENST00000432945 ZFP91Q96JP5 570 aaPredicted RBP3.93□□□□□ -1.78
HMGN1P33-201ENST00000432945 MICALL2Q8IY33 904 aa3.92□□□□□ -1.78
HMGN1P33-201ENST00000432945 FAM205CA6NFA0 338 aa3.91□□□□□ -1.78
HMGN1P33-201ENST00000432945 STK25O00506 426 aa3.91□□□□□ -1.78
HMGN1P33-201ENST00000432945 ECM2O94769 699 aaPredicted RBP3.91□□□□□ -1.78
HMGN1P33-201ENST00000432945 HOXB1P14653 301 aaPredicted RBP3.91□□□□□ -1.78
HMGN1P33-201ENST00000432945 DPY19L2Q6NUT2 758 aa3.91□□□□□ -1.78
HMGN1P33-201ENST00000432945 HS3ST6Q96QI5 342 aa3.91□□□□□ -1.78
HMGN1P33-201ENST00000432945 BCL11BQ9C0K0 894 aaPredicted RBP3.91□□□□□ -1.78
HMGN1P33-201ENST00000432945 STK24Q9Y6E0 443 aa3.91□□□□□ -1.78
HMGN1P33-201ENST00000432945 ERBB3P21860 1342 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms