RNA–Protein interactions for RNA: ENST00000430553.6

LDHA-206, Transcript of lactate dehydrogenase A, humanhuman

TSL 2 BASIC

Gene LDHA, Length 1,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-206ENST00000430553 FBXO3Q9UK99 471 aa12.28□□□□□ -0.44
LDHA-206ENST00000430553 TOP2BQ02880 1626 aa12.27□□□□□ -0.45
LDHA-206ENST00000430553 URB2Q14146 1524 aaKnown RBP12.26□□□□□ -0.45
LDHA-206ENST00000430553 CUX1P39880 1505 aa12.25□□□□□ -0.45
LDHA-206ENST00000430553 TOPBP1Q92547 1522 aa12.25□□□□□ -0.45
LDHA-206ENST00000430553 WRNQ14191 1432 aaPredicted RBP eCLIP12.24□□□□□ -0.45
LDHA-206ENST00000430553 SLC24A1O60721 1099 aa12.24□□□□□ -0.45
LDHA-206ENST00000430553 SYNJ1O43426 1573 aa12.23□□□□□ -0.45
LDHA-206ENST00000430553 ZBTB12Q9Y330 459 aaPredicted RBP12.2□□□□□ -0.46
LDHA-206ENST00000430553 CUX2O14529 1486 aa12.19□□□□□ -0.46
LDHA-206ENST00000430553 POLA1P09884 1462 aaPredicted RBP12.16□□□□□ -0.46
LDHA-206ENST00000430553 WDR97A6NE52 1622 aa12.16□□□□□ -0.46
LDHA-206ENST00000430553 FGD5Q6ZNL6 1462 aa12.14□□□□□ -0.47
LDHA-206ENST00000430553 VASPP50552 380 aaPredicted RBP12.14□□□□□ -0.47
LDHA-206ENST00000430553 TARBP1Q13395 1621 aaKnown RBP12.14□□□□□ -0.47
LDHA-206ENST00000430553 DSG3P32926 999 aa12.13□□□□□ -0.47
LDHA-206ENST00000430553 IFT140Q96RY7 1462 aa12.11□□□□□ -0.47
LDHA-206ENST00000430553 ABCA10Q8WWZ4 1543 aa12.1□□□□□ -0.47
LDHA-206ENST00000430553 ABCA5Q8WWZ7 1642 aa12.06□□□□□ -0.48
LDHA-206ENST00000430553 SOGA1O94964 1423 aa12.05□□□□□ -0.48
LDHA-206ENST00000430553 IFNLR1Q8IU57 520 aaPredicted RBP12.04□□□□□ -0.48
LDHA-206ENST00000430553 RAD54L2Q9Y4B4 1467 aa12.02□□□□□ -0.49
LDHA-206ENST00000430553 OSCARQ8IYS5 282 aa12.02□□□□□ -0.49
LDHA-206ENST00000430553 TRIM41Q8WV44 630 aa12.02□□□□□ -0.49
LDHA-206ENST00000430553 EIF4G3O43432 1585 aaKnown RBP12.01□□□□□ -0.49
LDHA-206ENST00000430553 ZNF692Q9BU19 519 aaPredicted RBP12□□□□□ -0.49
LDHA-206ENST00000430553 PBRM1Q86U86 1689 aa11.99□□□□□ -0.49
LDHA-206ENST00000430553 EEA1Q15075 1411 aa11.98□□□□□ -0.49
LDHA-206ENST00000430553 ERICH3Q5RHP9 1530 aa11.98□□□□□ -0.49
LDHA-206ENST00000430553 ZNF608Q9ULD9 1512 aaPredicted RBP11.97□□□□□ -0.49
LDHA-206ENST00000430553 KIF27Q86VH2 1401 aa11.97□□□□□ -0.49
LDHA-206ENST00000430553 GAPVD1Q14C86 1478 aa11.95□□□□□ -0.5
LDHA-206ENST00000430553 SPDYE2BA6NHP3 402 aa11.94□□□□□ -0.5
LDHA-206ENST00000430553 SPDYE6P0CI01 402 aa11.94□□□□□ -0.5
LDHA-206ENST00000430553 SPDYE2Q495Y8 402 aa11.94□□□□□ -0.5
LDHA-206ENST00000430553 CUL7Q14999 1698 aa11.94□□□□□ -0.5
LDHA-206ENST00000430553 GRIN2BQ13224 1484 aa11.94□□□□□ -0.5
LDHA-206ENST00000430553 SSUH2Q9Y2M2 353 aa11.93□□□□□ -0.5
LDHA-206ENST00000430553 MAGI1Q96QZ7 1491 aaPredicted RBP11.92□□□□□ -0.5
LDHA-206ENST00000430553 TDRD9Q8NDG6 1382 aaKnown RBP11.91□□□□□ -0.5
LDHA-206ENST00000430553 AQRO60306 1485 aaKnown RBP eCLIP11.9□□□□□ -0.51e-8■■■■□ 22.9
LDHA-206ENST00000430553 ADAMTS12P58397 1594 aa11.9□□□□□ -0.51
LDHA-206ENST00000430553 IGF1RP08069 1367 aa11.88□□□□□ -0.51
LDHA-206ENST00000430553 RUSC2Q8N2Y8 1516 aa11.87□□□□□ -0.51
LDHA-206ENST00000430553 CACNB1Q02641 598 aaPredicted RBP11.86□□□□□ -0.51
LDHA-206ENST00000430553 KIF21BO75037 1637 aa11.86□□□□□ -0.51
LDHA-206ENST00000430553 PRXQ9BXM0 1461 aa11.85□□□□□ -0.51
LDHA-206ENST00000430553 FHAD1B1AJZ9 1412 aa11.85□□□□□ -0.51
LDHA-206ENST00000430553 SYNJ2O15056 1496 aa11.84□□□□□ -0.51
LDHA-206ENST00000430553 SNAPC4Q5SXM2 1469 aa11.84□□□□□ -0.51
LDHA-206ENST00000430553 CHD1O14646 1710 aa11.83□□□□□ -0.52
LDHA-206ENST00000430553 PKD2Q13563 968 aa11.83□□□□□ -0.52
LDHA-206ENST00000430553 STAG3Q9UJ98 1225 aa11.83□□□□□ -0.52
LDHA-206ENST00000430553 KLHL34Q8N239 644 aa11.81□□□□□ -0.52
LDHA-206ENST00000430553 CARMIL1Q5VZK9 1371 aa11.79□□□□□ -0.52
LDHA-206ENST00000430553 GRIN2AQ12879 1464 aa11.79□□□□□ -0.52
LDHA-206ENST00000430553 RAPGEF2Q9Y4G8 1499 aa11.79□□□□□ -0.52
LDHA-206ENST00000430553 SPOCK2Q92563 424 aa11.77□□□□□ -0.53
LDHA-206ENST00000430553 CTTNBP2Q8WZ74 1663 aa11.76□□□□□ -0.53
LDHA-206ENST00000430553 PLCD3Q8N3E9 789 aa11.76□□□□□ -0.53
LDHA-206ENST00000430553 NUP160Q12769 1436 aa11.75□□□□□ -0.53
LDHA-206ENST00000430553 MIER1Q8N108 512 aa11.73□□□□□ -0.53
LDHA-206ENST00000430553 GOLGA3Q08378 1498 aa11.73□□□□□ -0.53
LDHA-206ENST00000430553 CEP170Q5SW79 1584 aa11.72□□□□□ -0.53
LDHA-206ENST00000430553 CLASP1Q7Z460 1538 aa11.71□□□□□ -0.53
LDHA-206ENST00000430553 SHROOM2Q13796 1616 aa11.7□□□□□ -0.54
LDHA-206ENST00000430553 PLCB2Q00722 1185 aa11.69□□□□□ -0.54
LDHA-206ENST00000430553 CHMP7Q8WUX9 453 aaPredicted RBP11.68□□□□□ -0.54
LDHA-206ENST00000430553 KIAA0586Q9BVV6 1533 aa11.68□□□□□ -0.54
LDHA-206ENST00000430553 IQGAP2Q13576 1575 aa11.67□□□□□ -0.54
LDHA-206ENST00000430553 ECM2O94769 699 aaPredicted RBP11.65□□□□□ -0.54
LDHA-206ENST00000430553 FAM9AQ8IZU1 332 aaPredicted RBP11.64□□□□□ -0.55
LDHA-206ENST00000430553 UGGT2Q9NYU1 1516 aa11.64□□□□□ -0.55
LDHA-206ENST00000430553 TNIKQ9UKE5 1360 aa11.64□□□□□ -0.55
LDHA-206ENST00000430553 SAMD9Q5K651 1589 aa11.61□□□□□ -0.55
LDHA-206ENST00000430553 EFCAB5A4FU69 1503 aa11.6□□□□□ -0.55
LDHA-206ENST00000430553 PLEKHG5O94827 1062 aa11.58□□□□□ -0.56
LDHA-206ENST00000430553 KIAA0556O60303 1618 aa11.56□□□□□ -0.56
LDHA-206ENST00000430553 DISP1Q96F81 1524 aa11.55□□□□□ -0.56
LDHA-206ENST00000430553 RGL2O15211 777 aa11.55□□□□□ -0.56
LDHA-206ENST00000430553 ZBTB47Q9UFB7 747 aaPredicted RBP11.55□□□□□ -0.56
LDHA-206ENST00000430553 HAP1P54257 671 aaPredicted RBP11.53□□□□□ -0.56
LDHA-206ENST00000430553 CIZ1Q9ULV3 898 aaPredicted RBP11.53□□□□□ -0.56
LDHA-206ENST00000430553 UBTFP17480 764 aaKnown RBP11.52□□□□□ -0.57
LDHA-206ENST00000430553 JPH4Q96JJ6 628 aa11.52□□□□□ -0.57
LDHA-206ENST00000430553 CEP162Q5TB80 1403 aa11.51□□□□□ -0.57
LDHA-206ENST00000430553 CARMIL2Q6F5E8 1435 aa11.51□□□□□ -0.57
LDHA-206ENST00000430553 NPM1P06748 294 aaKnown RBP eCLIP11.51□□□□□ -0.57
LDHA-206ENST00000430553 ARHGAP35Q9NRY4 1499 aa11.5□□□□□ -0.57
LDHA-206ENST00000430553 PRG4Q92954 1404 aaPredicted RBP11.5□□□□□ -0.57
LDHA-206ENST00000430553 ARHGEF11O15085 1522 aa11.5□□□□□ -0.57
LDHA-206ENST00000430553 RBM42Q9BTD8 480 aaKnown RBP11.49□□□□□ -0.57
LDHA-206ENST00000430553 CLIP1P30622 1438 aa11.49□□□□□ -0.57
LDHA-206ENST00000430553 ERCC6L2Q5T890 1561 aa11.48□□□□□ -0.57
LDHA-206ENST00000430553 LOC105371045A0A1W2PR82 267 aa11.48□□□□□ -0.57
LDHA-206ENST00000430553 AKT1S1Q96B36 256 aa11.48□□□□□ -0.57
LDHA-206ENST00000430553 RIMBP3CA6NJZ7 1639 aa11.48□□□□□ -0.57
LDHA-206ENST00000430553 RIMBP3BA6NNM3 1639 aa11.48□□□□□ -0.57
LDHA-206ENST00000430553 RIMBP3Q9UFD9 1639 aa11.48□□□□□ -0.57
LDHA-206ENST00000430553 SPDYE1Q8NFV5 336 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms