RNA–Protein interactions for RNA: ENST00000429816.1

AC009478.1-201, humanhuman

TSL 3 BASIC

Gene AC009478.1, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009478.1-201ENST00000429816 HMGXB3Q12766 1538 aa8.48□□□□□ -1.05
AC009478.1-201ENST00000429816 C19orf67A6NJJ6 358 aa8.46□□□□□ -1.06
AC009478.1-201ENST00000429816 BAZ1BQ9UIG0 1483 aaKnown RBP8.45□□□□□ -1.06
AC009478.1-201ENST00000429816 SPDYE4A6NLX3 237 aa8.44□□□□□ -1.06
AC009478.1-201ENST00000429816 CCDC88BA6NC98 1476 aa8.43□□□□□ -1.06
AC009478.1-201ENST00000429816 FARP1Q9Y4F1 1045 aaPredicted RBP8.39□□□□□ -1.07
AC009478.1-201ENST00000429816 GABBR2O75899 941 aa8.35□□□□□ -1.07
AC009478.1-201ENST00000429816 CREBZFQ9NS37 354 aa8.34□□□□□ -1.07
AC009478.1-201ENST00000429816 STAG3Q9UJ98 1225 aa8.34□□□□□ -1.07
AC009478.1-201ENST00000429816 CC2D2AQ9P2K1 1620 aa8.32□□□□□ -1.08
AC009478.1-201ENST00000429816 CD44P16070 742 aaKnown RBP8.31□□□□□ -1.08
AC009478.1-201ENST00000429816 CFTRP13569 1480 aa8.3□□□□□ -1.08
AC009478.1-201ENST00000429816 CADPSQ9ULU8 1353 aa8.25□□□□□ -1.09
AC009478.1-201ENST00000429816 PROM2Q8N271 834 aa8.24□□□□□ -1.09
AC009478.1-201ENST00000429816 TRIM41Q8WV44 630 aa8.24□□□□□ -1.09
AC009478.1-201ENST00000429816 WRNQ14191 1432 aaPredicted RBP eCLIP8.22□□□□□ -1.09
AC009478.1-201ENST00000429816 ZRANB1Q9UGI0 708 aa8.21□□□□□ -1.1
AC009478.1-201ENST00000429816 MNX1P50219 401 aaPredicted RBP8.2□□□□□ -1.1
AC009478.1-201ENST00000429816 POTEIP0CG38 1075 aa8.19□□□□□ -1.1
AC009478.1-201ENST00000429816 EEA1Q15075 1411 aa8.19□□□□□ -1.1
AC009478.1-201ENST00000429816 ZNF579Q8NAF0 562 aaKnown RBP8.17□□□□□ -1.1
AC009478.1-201ENST00000429816 ABCC8Q09428 1581 aa8.17□□□□□ -1.1
AC009478.1-201ENST00000429816 LAMC3Q9Y6N6 1575 aa8.16□□□□□ -1.1
AC009478.1-201ENST00000429816 TOP2BQ02880 1626 aa8.15□□□□□ -1.1
AC009478.1-201ENST00000429816 NPM1P06748 294 aaKnown RBP eCLIP8.14□□□□□ -1.11
AC009478.1-201ENST00000429816 CLCN6P51797 869 aa8.14□□□□□ -1.11
AC009478.1-201ENST00000429816 SYNJ1O43426 1573 aa8.14□□□□□ -1.11
AC009478.1-201ENST00000429816 BIVM-ERCC5R4GMW8 1640 aa8.12□□□□□ -1.11
AC009478.1-201ENST00000429816 FANCD2Q9BXW9 1451 aa8.12□□□□□ -1.11
AC009478.1-201ENST00000429816 PDS5BQ9NTI5 1447 aa8.12□□□□□ -1.11
AC009478.1-201ENST00000429816 GALR2O43603 387 aaPredicted RBP8.11□□□□□ -1.11
AC009478.1-201ENST00000429816 LHX8Q68G74 356 aa8.11□□□□□ -1.11
AC009478.1-201ENST00000429816 PHF12Q96QT6 1004 aa8.11□□□□□ -1.11
AC009478.1-201ENST00000429816 CUX1P39880 1505 aa8.11□□□□□ -1.11
AC009478.1-201ENST00000429816 PRDM2Q13029 1718 aa8.1□□□□□ -1.11
AC009478.1-201ENST00000429816 PAK3O75914 559 aaPredicted RBP8.09□□□□□ -1.11
AC009478.1-201ENST00000429816 DCBLD2Q96PD2 775 aa8.09□□□□□ -1.11
AC009478.1-201ENST00000429816 SOGA1O94964 1423 aa8.07□□□□□ -1.12
AC009478.1-201ENST00000429816 MIER1Q8N108 512 aa8.07□□□□□ -1.12
AC009478.1-201ENST00000429816 CEP164Q9UPV0 1460 aa8.06□□□□□ -1.12
AC009478.1-201ENST00000429816 FKBP8Q14318 412 aa8.06□□□□□ -1.12
AC009478.1-201ENST00000429816 NESP48681 1621 aa8.06□□□□□ -1.12
AC009478.1-201ENST00000429816 DNMBPQ6XZF7 1577 aa8.05□□□□□ -1.12
AC009478.1-201ENST00000429816 TSPYL2Q9H2G4 693 aaPredicted RBP8.04□□□□□ -1.12
AC009478.1-201ENST00000429816 TOPBP1Q92547 1522 aa8.03□□□□□ -1.12
AC009478.1-201ENST00000429816 KIF27Q86VH2 1401 aa8.03□□□□□ -1.12
AC009478.1-201ENST00000429816 FGD5Q6ZNL6 1462 aa8.01□□□□□ -1.13
AC009478.1-201ENST00000429816 PRXQ9BXM0 1461 aa8.01□□□□□ -1.13
AC009478.1-201ENST00000429816 URB2Q14146 1524 aaKnown RBP8.01□□□□□ -1.13
AC009478.1-201ENST00000429816 ABCA10Q8WWZ4 1543 aa8.01□□□□□ -1.13
AC009478.1-201ENST00000429816 KIF21BO75037 1637 aa8□□□□□ -1.13
AC009478.1-201ENST00000429816 RUSC2Q8N2Y8 1516 aa8□□□□□ -1.13
AC009478.1-201ENST00000429816 POLA1P09884 1462 aaPredicted RBP8□□□□□ -1.13
AC009478.1-201ENST00000429816 GOLGA3Q08378 1498 aa8□□□□□ -1.13
AC009478.1-201ENST00000429816 TNIKQ9UKE5 1360 aa7.99□□□□□ -1.13
AC009478.1-201ENST00000429816 LOC105371045A0A1W2PR82 267 aa7.99□□□□□ -1.13
AC009478.1-201ENST00000429816 MS4A3Q96HJ5 214 aa7.99□□□□□ -1.13
AC009478.1-201ENST00000429816 CCDC61Q9Y6R9 512 aa7.99□□□□□ -1.13
AC009478.1-201ENST00000429816 MRC2Q9UBG0 1479 aa7.99□□□□□ -1.13
AC009478.1-201ENST00000429816 ERICH3Q5RHP9 1530 aa7.98□□□□□ -1.13
AC009478.1-201ENST00000429816 PLEKHG5O94827 1062 aa7.98□□□□□ -1.13
AC009478.1-201ENST00000429816 RASEFQ8IZ41 740 aa7.98□□□□□ -1.13
AC009478.1-201ENST00000429816 PELP1Q8IZL8 1130 aaKnown RBP7.98□□□□□ -1.13
AC009478.1-201ENST00000429816 PLCD3Q8N3E9 789 aa7.98□□□□□ -1.13
AC009478.1-201ENST00000429816 FAM9AQ8IZU1 332 aaPredicted RBP7.97□□□□□ -1.13
AC009478.1-201ENST00000429816 WDR62O43379 1518 aa7.97□□□□□ -1.13
AC009478.1-201ENST00000429816 IGF1RP08069 1367 aa7.96□□□□□ -1.14
AC009478.1-201ENST00000429816 CUX2O14529 1486 aa7.95□□□□□ -1.14
AC009478.1-201ENST00000429816 KIF12Q96FN5 646 aa7.95□□□□□ -1.14
AC009478.1-201ENST00000429816 WDR97A6NE52 1622 aa7.93□□□□□ -1.14
AC009478.1-201ENST00000429816 POTEB2H3BUK9 544 aa7.93□□□□□ -1.14
AC009478.1-201ENST00000429816 ATMINO43313 823 aaPredicted RBP7.92□□□□□ -1.14
AC009478.1-201ENST00000429816 ASTLQ6HA08 431 aaPredicted RBP7.92□□□□□ -1.14
AC009478.1-201ENST00000429816 RAPGEF2Q9Y4G8 1499 aa7.92□□□□□ -1.14
AC009478.1-201ENST00000429816 MAP3K13O43283 966 aa7.91□□□□□ -1.14
AC009478.1-201ENST00000429816 NUBP1P53384 320 aa7.91□□□□□ -1.14
AC009478.1-201ENST00000429816 CEP162Q5TB80 1403 aa7.91□□□□□ -1.14
AC009478.1-201ENST00000429816 IFT140Q96RY7 1462 aa7.91□□□□□ -1.14
AC009478.1-201ENST00000429816 RAD54L2Q9Y4B4 1467 aa7.91□□□□□ -1.14
AC009478.1-201ENST00000429816 TARBP1Q13395 1621 aaKnown RBP7.91□□□□□ -1.14
AC009478.1-201ENST00000429816 KIF21AQ7Z4S6 1674 aa7.91□□□□□ -1.14
AC009478.1-201ENST00000429816 ABCA5Q8WWZ7 1642 aa7.9□□□□□ -1.14
AC009478.1-201ENST00000429816 TRPC6Q9Y210 931 aa7.9□□□□□ -1.14
AC009478.1-201ENST00000429816 THOC2Q8NI27 1593 aaKnown RBP7.88□□□□□ -1.15
AC009478.1-201ENST00000429816 ERCC6Q03468 1493 aa7.88□□□□□ -1.15
AC009478.1-201ENST00000429816 CARMIL1Q5VZK9 1371 aa7.88□□□□□ -1.15
AC009478.1-201ENST00000429816 GAPVD1Q14C86 1478 aa7.87□□□□□ -1.15
AC009478.1-201ENST00000429816 ATN1P54259 1190 aaPredicted RBP7.87□□□□□ -1.15
AC009478.1-201ENST00000429816 OTUD5Q96G74 571 aa7.87□□□□□ -1.15
AC009478.1-201ENST00000429816 CUL7Q14999 1698 aa7.86□□□□□ -1.15
AC009478.1-201ENST00000429816 ZBTB47Q9UFB7 747 aaPredicted RBP7.86□□□□□ -1.15
AC009478.1-201ENST00000429816 UBTFP17480 764 aaKnown RBP7.85□□□□□ -1.15
AC009478.1-201ENST00000429816 BMP2KQ9NSY1 1161 aaPredicted RBP7.85□□□□□ -1.15
AC009478.1-201ENST00000429816 METRNQ9UJH8 293 aa7.85□□□□□ -1.15
AC009478.1-201ENST00000429816 CLIP1P30622 1438 aa7.85□□□□□ -1.15
AC009478.1-201ENST00000429816 TDRD9Q8NDG6 1382 aaKnown RBP7.84□□□□□ -1.15
AC009478.1-201ENST00000429816 GRIN2BQ13224 1484 aa7.84□□□□□ -1.15
AC009478.1-201ENST00000429816 C7P10643 843 aa7.84□□□□□ -1.15
AC009478.1-201ENST00000429816 SLC39A7Q92504 469 aa7.84□□□□□ -1.15
AC009478.1-201ENST00000429816 FBXO3Q9UK99 471 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms