RNA–Protein interactions for RNA: ENST00000429816.1

AC009478.1-201, humanhuman

TSL 3 BASIC

Gene AC009478.1, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009478.1-201ENST00000429816 AEBP2Q6ZN18 517 aaPredicted RBP16.28■□□□□ 0.2
AC009478.1-201ENST00000429816 CHIC1Q5VXU3 224 aa15.44■□□□□ 0.06
AC009478.1-201ENST00000429816 SENP3Q9H4L4 574 aaPredicted RBP13.81□□□□□ -0.2
AC009478.1-201ENST00000429816 PHF23Q9BUL5 403 aaPredicted RBP13.69□□□□□ -0.22
AC009478.1-201ENST00000429816 FOXD1Q16676 465 aa12.92□□□□□ -0.34
AC009478.1-201ENST00000429816 PLPPR3Q6T4P5 718 aa12.32□□□□□ -0.44
AC009478.1-201ENST00000429816 PPP6R1Q9UPN7 881 aa12.15□□□□□ -0.46
AC009478.1-201ENST00000429816 ADRA2BP18089 450 aa12.1□□□□□ -0.47
AC009478.1-201ENST00000429816 PIAS4Q8N2W9 510 aaPredicted RBP12.05□□□□□ -0.48
AC009478.1-201ENST00000429816 MSH5O43196 834 aa12.01□□□□□ -0.49
AC009478.1-201ENST00000429816 POTEDQ86YR6 584 aa11.74□□□□□ -0.53
AC009478.1-201ENST00000429816 NISCHQ9Y2I1 1504 aa11.28□□□□□ -0.6
AC009478.1-201ENST00000429816 MAPK8IP2Q13387 824 aaPredicted RBP11.13□□□□□ -0.63
AC009478.1-201ENST00000429816 SCAF1Q9H7N4 1312 aaKnown RBP10.98□□□□□ -0.65
AC009478.1-201ENST00000429816 DMRT2Q9Y5R5 561 aa10.97□□□□□ -0.65
AC009478.1-201ENST00000429816 PPP4R3CPQ6ZMV5 832 aa10.84□□□□□ -0.67
AC009478.1-201ENST00000429816 CNKSR2Q8WXI2 1034 aa10.6□□□□□ -0.71
AC009478.1-201ENST00000429816 HOXD11P31277 338 aaPredicted RBP10.58□□□□□ -0.72
AC009478.1-201ENST00000429816 DCAF8L1A6NGE4 600 aa10.53□□□□□ -0.72
AC009478.1-201ENST00000429816 RNF216Q9NWF9 866 aaPredicted RBP10.5□□□□□ -0.73
AC009478.1-201ENST00000429816 NCBP3Q53F19 620 aaKnown RBP10.38□□□□□ -0.75
AC009478.1-201ENST00000429816 CACNB1Q02641 598 aaPredicted RBP10.33□□□□□ -0.76
AC009478.1-201ENST00000429816 RNF39Q9H2S5 420 aa10.29□□□□□ -0.76
AC009478.1-201ENST00000429816 NPM3O75607 178 aaKnown RBP10.28□□□□□ -0.76
AC009478.1-201ENST00000429816 DNAJC5BQ9UF47 199 aa10.17□□□□□ -0.78
AC009478.1-201ENST00000429816 KCNA4P22459 653 aa10.12□□□□□ -0.79
AC009478.1-201ENST00000429816 C1QBPQ07021 282 aaKnown RBP10.12□□□□□ -0.79
AC009478.1-201ENST00000429816 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.08□□□□□ -0.8
AC009478.1-201ENST00000429816 U3KPZ7 1027 aaPredicted RBP9.89□□□□□ -0.83
AC009478.1-201ENST00000429816 SLC4A2P04920 1241 aa9.84□□□□□ -0.83
AC009478.1-201ENST00000429816 CCDC180Q9P1Z9 1646 aa9.83□□□□□ -0.84
AC009478.1-201ENST00000429816 SPINK5Q9NQ38 1064 aaPredicted RBP9.76□□□□□ -0.85
AC009478.1-201ENST00000429816 CAPN15O75808 1086 aa9.71□□□□□ -0.86
AC009478.1-201ENST00000429816 DSG3P32926 999 aa9.66□□□□□ -0.86
AC009478.1-201ENST00000429816 TRHP20396 242 aaPredicted RBP9.57□□□□□ -0.88
AC009478.1-201ENST00000429816 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.54□□□□□ -0.88
AC009478.1-201ENST00000429816 HNRNPUL2Q1KMD3 747 aaKnown RBP9.54□□□□□ -0.88
AC009478.1-201ENST00000429816 SLC4A1APQ9BWU0 796 aaKnown RBP9.53□□□□□ -0.88
AC009478.1-201ENST00000429816 APLP2Q06481 763 aa9.52□□□□□ -0.89
AC009478.1-201ENST00000429816 ABCB7O75027 752 aa9.51□□□□□ -0.89
AC009478.1-201ENST00000429816 SAMD1Q6SPF0 538 aaPredicted RBP9.51□□□□□ -0.89
AC009478.1-201ENST00000429816 ZCCHC6Q5VYS8 1495 aaKnown RBP9.51□□□□□ -0.89
AC009478.1-201ENST00000429816 ZNF219Q9P2Y4 722 aaPredicted RBP9.49□□□□□ -0.89
AC009478.1-201ENST00000429816 MYCNP04198 464 aaPredicted RBP9.46□□□□□ -0.9
AC009478.1-201ENST00000429816 DCAF1Q9Y4B6 1507 aa9.44□□□□□ -0.9
AC009478.1-201ENST00000429816 FOXD4L1Q9NU39 408 aa9.39□□□□□ -0.91
AC009478.1-201ENST00000429816 MYO15BQ96JP2 1530 aa9.36□□□□□ -0.91
AC009478.1-201ENST00000429816 POLA2Q14181 598 aa9.33□□□□□ -0.92
AC009478.1-201ENST00000429816 ATF5Q9Y2D1 282 aaPredicted RBP9.33□□□□□ -0.92
AC009478.1-201ENST00000429816 ZBTB22O15209 634 aa9.32□□□□□ -0.92
AC009478.1-201ENST00000429816 POTEHQ6S545 545 aa9.19□□□□□ -0.94
AC009478.1-201ENST00000429816 NACADO15069 1562 aa9.19□□□□□ -0.94
AC009478.1-201ENST00000429816 ABCC9O60706 1549 aa9.18□□□□□ -0.94
AC009478.1-201ENST00000429816 RBM42Q9BTD8 480 aaKnown RBP9.15□□□□□ -0.94
AC009478.1-201ENST00000429816 DCAF8L2P0C7V8 631 aa9.08□□□□□ -0.96
AC009478.1-201ENST00000429816 ATXN8OSP0DMR3 200 aa9.08□□□□□ -0.96
AC009478.1-201ENST00000429816 RB1CC1Q8TDY2 1594 aa9.06□□□□□ -0.96
AC009478.1-201ENST00000429816 ZBTB12Q9Y330 459 aaPredicted RBP9.05□□□□□ -0.96
AC009478.1-201ENST00000429816 OSCARQ8IYS5 282 aa9.01□□□□□ -0.97
AC009478.1-201ENST00000429816 SHROOM4Q9ULL8 1493 aa9□□□□□ -0.97
AC009478.1-201ENST00000429816 CHRDL2Q6WN34 429 aa8.99□□□□□ -0.97
AC009478.1-201ENST00000429816 AKT1S1Q96B36 256 aa8.98□□□□□ -0.97
AC009478.1-201ENST00000429816 REM2Q8IYK8 340 aaPredicted RBP8.93□□□□□ -0.98
AC009478.1-201ENST00000429816 SCRIBQ14160 1630 aa8.92□□□□□ -0.98
AC009478.1-201ENST00000429816 CSRNP3Q8WYN3 585 aa8.92□□□□□ -0.98
AC009478.1-201ENST00000429816 FBLN2P98095 1184 aa8.88□□□□□ -0.99
AC009478.1-201ENST00000429816 MKRN4PQ13434 485 aaPredicted RBP8.88□□□□□ -0.99
AC009478.1-201ENST00000429816 PITPNM1O00562 1244 aa8.82□□□□□ -1
AC009478.1-201ENST00000429816 SPDYE2BA6NHP3 402 aa8.81□□□□□ -1
AC009478.1-201ENST00000429816 SPDYE6P0CI01 402 aa8.81□□□□□ -1
AC009478.1-201ENST00000429816 SPDYE2Q495Y8 402 aa8.81□□□□□ -1
AC009478.1-201ENST00000429816 PIP4P2Q8N4L2 257 aa8.79□□□□□ -1
AC009478.1-201ENST00000429816 EHMT2Q96KQ7 1210 aa8.79□□□□□ -1
AC009478.1-201ENST00000429816 BICRAQ9NZM4 1560 aa8.78□□□□□ -1
AC009478.1-201ENST00000429816 RSF1Q96T23 1441 aaPredicted RBP8.75□□□□□ -1.01
AC009478.1-201ENST00000429816 ZNF692Q9BU19 519 aaPredicted RBP8.75□□□□□ -1.01
AC009478.1-201ENST00000429816 FXR2P51116 673 aaKnown RBP eCLIP8.74□□□□□ -1.01
AC009478.1-201ENST00000429816 BAZ1AQ9NRL2 1556 aaPredicted RBP8.72□□□□□ -1.01
AC009478.1-201ENST00000429816 SSUH2Q9Y2M2 353 aa8.71□□□□□ -1.02
AC009478.1-201ENST00000429816 UNC13AQ9UPW8 1703 aa8.71□□□□□ -1.02
AC009478.1-201ENST00000429816 CECR2Q9BXF3 1484 aa8.7□□□□□ -1.02
AC009478.1-201ENST00000429816 SUPT5HO00267 1087 aaKnown RBP8.67□□□□□ -1.02
AC009478.1-201ENST00000429816 CLEC11AQ9Y240 323 aa8.67□□□□□ -1.02
AC009478.1-201ENST00000429816 MROH2BQ7Z745 1585 aa8.66□□□□□ -1.02
AC009478.1-201ENST00000429816 SPDYE1Q8NFV5 336 aaPredicted RBP8.66□□□□□ -1.02
AC009478.1-201ENST00000429816 HAX1O00165 279 aa8.63□□□□□ -1.03
AC009478.1-201ENST00000429816 PABPN1Q86U42 306 aaKnown RBP eCLIP8.63□□□□□ -1.03
AC009478.1-201ENST00000429816 PEG3Q9GZU2 1588 aa8.63□□□□□ -1.03
AC009478.1-201ENST00000429816 SMARCA4P51532 1647 aa8.62□□□□□ -1.03
AC009478.1-201ENST00000429816 SP7Q8TDD2 431 aaPredicted RBP8.62□□□□□ -1.03
AC009478.1-201ENST00000429816 PRKAR2AP13861 404 aaKnown RBP8.59□□□□□ -1.03
AC009478.1-201ENST00000429816 EVX2Q03828 476 aa8.59□□□□□ -1.03
AC009478.1-201ENST00000429816 TOP2AP11388 1531 aaKnown RBP8.54□□□□□ -1.04
AC009478.1-201ENST00000429816 SMARCA2P51531 1590 aa8.53□□□□□ -1.04
AC009478.1-201ENST00000429816 ATAD2BQ9ULI0 1458 aa8.53□□□□□ -1.04
AC009478.1-201ENST00000429816 PRR29P0C7W0 189 aa8.53□□□□□ -1.04
AC009478.1-201ENST00000429816 CHADLQ6NUI6 762 aa8.53□□□□□ -1.04
AC009478.1-201ENST00000429816 WIZO95785 1651 aa8.52□□□□□ -1.05
AC009478.1-201ENST00000429816 EIF4G1Q04637 1599 aaKnown RBP8.51□□□□□ -1.05
AC009478.1-201ENST00000429816 NCAPD3P42695 1498 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms