RNA–Protein interactions for RNA: ENST00000429136.5

ATP13A3-202, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-202ENST00000429136 RRBP1Q9P2E9 1410 aaKnown RBP7.72□□□□□ -1.17
ATP13A3-202ENST00000429136 DHX57Q6P158 1386 aaKnown RBP7.71□□□□□ -1.17
ATP13A3-202ENST00000429136 GTF3C3Q9Y5Q9 886 aa7.71□□□□□ -1.17
ATP13A3-202ENST00000429136 FHOD3Q2V2M9 1422 aa7.71□□□□□ -1.17
ATP13A3-202ENST00000429136 POLA1P09884 1462 aaPredicted RBP7.71□□□□□ -1.18
ATP13A3-202ENST00000429136 SETD5Q9C0A6 1442 aa7.71□□□□□ -1.18
ATP13A3-202ENST00000429136 ABCA10Q8WWZ4 1543 aa7.7□□□□□ -1.18
ATP13A3-202ENST00000429136 CDK11AQ9UQ88 783 aaPredicted RBP7.7□□□□□ -1.18
ATP13A3-202ENST00000429136 SCAF1Q9H7N4 1312 aaKnown RBP7.7□□□□□ -1.18
ATP13A3-202ENST00000429136 NESP48681 1621 aa7.69□□□□□ -1.18
ATP13A3-202ENST00000429136 MIER1Q8N108 512 aa7.69□□□□□ -1.18
ATP13A3-202ENST00000429136 LAMC3Q9Y6N6 1575 aa7.69□□□□□ -1.18
ATP13A3-202ENST00000429136 RAB3GAP2Q9H2M9 1393 aa7.69□□□□□ -1.18
ATP13A3-202ENST00000429136 TRIM52Q96A61 297 aa7.68□□□□□ -1.18
ATP13A3-202ENST00000429136 GAPVD1Q14C86 1478 aa7.68□□□□□ -1.18
ATP13A3-202ENST00000429136 EFCAB5A4FU69 1503 aa7.68□□□□□ -1.18
ATP13A3-202ENST00000429136 PRDM2Q13029 1718 aa7.68□□□□□ -1.18
ATP13A3-202ENST00000429136 LRRC9Q6ZRR7 1453 aa7.68□□□□□ -1.18
ATP13A3-202ENST00000429136 MAP3K1Q13233 1512 aa7.68□□□□□ -1.18
ATP13A3-202ENST00000429136 TONSLQ96HA7 1378 aa7.67□□□□□ -1.18
ATP13A3-202ENST00000429136 TIMELESSQ9UNS1 1208 aa7.67□□□□□ -1.18
ATP13A3-202ENST00000429136 TIAM1Q13009 1591 aa7.67□□□□□ -1.18
ATP13A3-202ENST00000429136 CASKIN1Q8WXD9 1431 aa7.66□□□□□ -1.18
ATP13A3-202ENST00000429136 FYCO1Q9BQS8 1478 aa7.66□□□□□ -1.18
ATP13A3-202ENST00000429136 FBLN2P98095 1184 aa7.65□□□□□ -1.18
ATP13A3-202ENST00000429136 CUL7Q14999 1698 aa7.65□□□□□ -1.18
ATP13A3-202ENST00000429136 ARID3CA6NKF2 412 aa7.64□□□□□ -1.19
ATP13A3-202ENST00000429136 PHLDB1Q86UU1 1377 aa7.64□□□□□ -1.19
ATP13A3-202ENST00000429136 CHMP7Q8WUX9 453 aaPredicted RBP7.63□□□□□ -1.19
ATP13A3-202ENST00000429136 AQRO60306 1485 aaKnown RBP eCLIP7.62□□□□□ -1.196e-7■■■■□ 24.4
ATP13A3-202ENST00000429136 ANP32CO43423 234 aa7.62□□□□□ -1.19
ATP13A3-202ENST00000429136 NEFLP07196 543 aa7.62□□□□□ -1.19
ATP13A3-202ENST00000429136 ERCC6Q03468 1493 aa7.62□□□□□ -1.19
ATP13A3-202ENST00000429136 URB2Q14146 1524 aaKnown RBP7.61□□□□□ -1.19
ATP13A3-202ENST00000429136 CHIC2Q9UKJ5 165 aa7.61□□□□□ -1.19
ATP13A3-202ENST00000429136 SIN3AQ96ST3 1273 aa7.61□□□□□ -1.19
ATP13A3-202ENST00000429136 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.6□□□□□ -1.19
ATP13A3-202ENST00000429136 FGD6Q6ZV73 1430 aa7.6□□□□□ -1.19
ATP13A3-202ENST00000429136 PCF11O94913 1555 aaKnown RBP7.6□□□□□ -1.19
ATP13A3-202ENST00000429136 MRC2Q9UBG0 1479 aa7.59□□□□□ -1.19
ATP13A3-202ENST00000429136 RRP7BPQ9NSQ0 103 aa7.59□□□□□ -1.19
ATP13A3-202ENST00000429136 DDX10Q13206 875 aaKnown RBP7.59□□□□□ -1.19
ATP13A3-202ENST00000429136 CCDC18Q5T9S5 1454 aa7.59□□□□□ -1.2
ATP13A3-202ENST00000429136 GRIN2BQ13224 1484 aa7.58□□□□□ -1.2
ATP13A3-202ENST00000429136 MYOM3Q5VTT5 1437 aa7.57□□□□□ -1.2
ATP13A3-202ENST00000429136 ZNF777Q9ULD5 760 aaPredicted RBP7.56□□□□□ -1.2
ATP13A3-202ENST00000429136 IFT140Q96RY7 1462 aa7.56□□□□□ -1.2
ATP13A3-202ENST00000429136 NCOA2Q15596 1464 aa7.56□□□□□ -1.2
ATP13A3-202ENST00000429136 EHBP1L1Q8N3D4 1523 aa7.55□□□□□ -1.2
ATP13A3-202ENST00000429136 CARMIL2Q6F5E8 1435 aa7.55□□□□□ -1.2
ATP13A3-202ENST00000429136 PPP1R15AO75807 674 aaPredicted RBP7.55□□□□□ -1.2
ATP13A3-202ENST00000429136 PLEKHD1A6NEE1 506 aa7.54□□□□□ -1.2
ATP13A3-202ENST00000429136 CFDP1Q9UEE9 299 aaPredicted RBP7.54□□□□□ -1.2
ATP13A3-202ENST00000429136 CFAP43Q8NDM7 1665 aa7.53□□□□□ -1.2
ATP13A3-202ENST00000429136 CTTNBP2Q8WZ74 1663 aa7.53□□□□□ -1.2
ATP13A3-202ENST00000429136 DNAJC5BQ9UF47 199 aa7.53□□□□□ -1.2
ATP13A3-202ENST00000429136 UACAQ9BZF9 1416 aa7.53□□□□□ -1.2
ATP13A3-202ENST00000429136 SLC4A1APQ9BWU0 796 aaKnown RBP7.52□□□□□ -1.21
ATP13A3-202ENST00000429136 THOC2Q8NI27 1593 aaKnown RBP7.52□□□□□ -1.21
ATP13A3-202ENST00000429136 EIF4G2P78344 907 aaKnown RBP eCLIP7.52□□□□□ -1.212e-6■■■□□ 15.2
ATP13A3-202ENST00000429136 HECW1Q76N89 1606 aa7.52□□□□□ -1.21
ATP13A3-202ENST00000429136 HFM1A2PYH4 1435 aa7.52□□□□□ -1.21
ATP13A3-202ENST00000429136 IQGAP2Q13576 1575 aa7.51□□□□□ -1.21
ATP13A3-202ENST00000429136 TSPY4P0CV99 314 aa7.51□□□□□ -1.21
ATP13A3-202ENST00000429136 TSPY10P0CW01 314 aa7.51□□□□□ -1.21
ATP13A3-202ENST00000429136 AEBP2Q6ZN18 517 aaPredicted RBP7.51□□□□□ -1.21
ATP13A3-202ENST00000429136 ABCA5Q8WWZ7 1642 aa7.51□□□□□ -1.21
ATP13A3-202ENST00000429136 SUPT6HQ7KZ85 1726 aaKnown RBP7.51□□□□□ -1.21
ATP13A3-202ENST00000429136 HIRIP3Q9BW71 556 aaPredicted RBP7.51□□□□□ -1.21
ATP13A3-202ENST00000429136 MIA2Q96PC5 1412 aa7.5□□□□□ -1.21
ATP13A3-202ENST00000429136 POLR3GLQ9BT43 218 aa7.5□□□□□ -1.21
ATP13A3-202ENST00000429136 KIAA0586Q9BVV6 1533 aa7.49□□□□□ -1.21
ATP13A3-202ENST00000429136 SNAPC4Q5SXM2 1469 aa7.49□□□□□ -1.21
ATP13A3-202ENST00000429136 MPHOSPH9Q99550 1183 aa7.49□□□□□ -1.21
ATP13A3-202ENST00000429136 CCER2I3L3R5 266 aa7.49□□□□□ -1.21
ATP13A3-202ENST00000429136 ZNF326Q5BKZ1 582 aaKnown RBP7.49□□□□□ -1.21
ATP13A3-202ENST00000429136 JPH4Q96JJ6 628 aa7.49□□□□□ -1.21
ATP13A3-202ENST00000429136 EPRSP07814 1512 aaKnown RBP7.48□□□□□ -1.21
ATP13A3-202ENST00000429136 KIF21AQ7Z4S6 1674 aa7.47□□□□□ -1.21
ATP13A3-202ENST00000429136 NAIPQ13075 1403 aa7.47□□□□□ -1.21
ATP13A3-202ENST00000429136 MAPKBP1O60336 1514 aa7.47□□□□□ -1.21
ATP13A3-202ENST00000429136 SAMD9Q5K651 1589 aa7.46□□□□□ -1.21
ATP13A3-202ENST00000429136 ADAMTS12P58397 1594 aa7.46□□□□□ -1.22
ATP13A3-202ENST00000429136 ANKRD30AQ9BXX3 1397 aa7.45□□□□□ -1.22
ATP13A3-202ENST00000429136 MYT1Q01538 1121 aa7.45□□□□□ -1.22
ATP13A3-202ENST00000429136 PTPN23Q9H3S7 1636 aa7.45□□□□□ -1.22
ATP13A3-202ENST00000429136 GRIN2AQ12879 1464 aa7.44□□□□□ -1.22
ATP13A3-202ENST00000429136 MAGI1Q96QZ7 1491 aaPredicted RBP7.44□□□□□ -1.22
ATP13A3-202ENST00000429136 WDR97A6NE52 1622 aa7.44□□□□□ -1.22
ATP13A3-202ENST00000429136 CDK13Q14004 1512 aaKnown RBP7.44□□□□□ -1.22
ATP13A3-202ENST00000429136 UGGT2Q9NYU1 1516 aa7.44□□□□□ -1.22
ATP13A3-202ENST00000429136 ZNF608Q9ULD9 1512 aaPredicted RBP7.44□□□□□ -1.22
ATP13A3-202ENST00000429136 TARBP1Q13395 1621 aaKnown RBP7.44□□□□□ -1.22
ATP13A3-202ENST00000429136 POTEDQ86YR6 584 aa7.44□□□□□ -1.22
ATP13A3-202ENST00000429136 MYT1LQ9UL68 1186 aa7.44□□□□□ -1.22
ATP13A3-202ENST00000429136 AKNAQ7Z591 1439 aa7.44□□□□□ -1.22
ATP13A3-202ENST00000429136 HSPA5P11021 654 aaKnown RBP7.43□□□□□ -1.22
ATP13A3-202ENST00000429136 TROQ12816 1431 aaPredicted RBP7.43□□□□□ -1.22
ATP13A3-202ENST00000429136 HNRNPUQ00839 825 aaKnown RBP eCLIP7.43□□□□□ -1.22
ATP13A3-202ENST00000429136 SYNJ2O15056 1496 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms