RNA–Protein interactions for RNA: ENST00000428956.6

C4A-243, Transcript of complement C4A (Rodgers blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C4A, Length 5,460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-243ENST00000428956 GLIPR1L2Q4G1C9 344 aa20.96■□□□□ 0.95
C4A-243ENST00000428956 DDRGK1Q96HY6 314 aa20.94■□□□□ 0.94
C4A-243ENST00000428956 SALL2Q9Y467 1007 aaPredicted RBP20.94■□□□□ 0.94
C4A-243ENST00000428956 ERCC6Q03468 1493 aa20.94■□□□□ 0.94
C4A-243ENST00000428956 EIF5BO60841 1220 aaKnown RBP20.93■□□□□ 0.94
C4A-243ENST00000428956 CHMP7Q8WUX9 453 aaPredicted RBP20.93■□□□□ 0.94
C4A-243ENST00000428956 KIF27Q86VH2 1401 aa20.9■□□□□ 0.94
C4A-243ENST00000428956 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.9■□□□□ 0.94
C4A-243ENST00000428956 NBR1Q14596 966 aa20.88■□□□□ 0.93
C4A-243ENST00000428956 KDM2AQ9Y2K7 1162 aa20.88■□□□□ 0.93
C4A-243ENST00000428956 ANP32EQ9BTT0 268 aa20.86■□□□□ 0.93
C4A-243ENST00000428956 BECN1Q14457 450 aa20.84■□□□□ 0.93
C4A-243ENST00000428956 RRP7BPQ9NSQ0 103 aa20.84■□□□□ 0.93
C4A-243ENST00000428956 CDCA8Q53HL2 280 aa20.82■□□□□ 0.92
C4A-243ENST00000428956 MYH16Q9H6N6 1097 aa20.81■□□□□ 0.92
C4A-243ENST00000428956 TIMELESSQ9UNS1 1208 aa20.81■□□□□ 0.92
C4A-243ENST00000428956 BAZ1BQ9UIG0 1483 aaKnown RBP20.8■□□□□ 0.92
C4A-243ENST00000428956 IRX6P78412 446 aaPredicted RBP20.8■□□□□ 0.92
C4A-243ENST00000428956 HIRIP3Q9BW71 556 aaPredicted RBP20.8■□□□□ 0.92
C4A-243ENST00000428956 BAZ1AQ9NRL2 1556 aaPredicted RBP20.77■□□□□ 0.92
C4A-243ENST00000428956 PLEKHD1A6NEE1 506 aa20.76■□□□□ 0.91
C4A-243ENST00000428956 PLPPR3Q6T4P5 718 aa20.73■□□□□ 0.91
C4A-243ENST00000428956 PPP4R2Q9NY27 417 aa20.73■□□□□ 0.91
C4A-243ENST00000428956 PPM1GO15355 546 aaPredicted RBP20.71■□□□□ 0.91
C4A-243ENST00000428956 FHAD1B1AJZ9 1412 aa20.71■□□□□ 0.91
C4A-243ENST00000428956 CFAP53Q96M91 514 aa20.69■□□□□ 0.9
C4A-243ENST00000428956 CCNB3Q8WWL7 1395 aa20.68■□□□□ 0.9
C4A-243ENST00000428956 SUPT16HQ9Y5B9 1047 aaKnown RBP20.68■□□□□ 0.9
C4A-243ENST00000428956 CFDP1Q9UEE9 299 aaPredicted RBP20.66■□□□□ 0.9
C4A-243ENST00000428956 KNSTRNQ9Y448 316 aa20.66■□□□□ 0.9
C4A-243ENST00000428956 GOLGA6L22H0YM25 854 aa20.66■□□□□ 0.9
C4A-243ENST00000428956 CARD11Q9BXL7 1154 aa20.64■□□□□ 0.89
C4A-243ENST00000428956 CCER2I3L3R5 266 aa20.64■□□□□ 0.89
C4A-243ENST00000428956 NCLP19338 710 aaKnown RBP20.59■□□□□ 0.89
C4A-243ENST00000428956 TRIM44Q96DX7 344 aaPredicted RBP20.58■□□□□ 0.88
C4A-243ENST00000428956 VPS8Q8N3P4 1428 aa20.56■□□□□ 0.88
C4A-243ENST00000428956 SIN3AQ96ST3 1273 aa20.55■□□□□ 0.88
C4A-243ENST00000428956 RGL3Q3MIN7 710 aa20.54■□□□□ 0.88
C4A-243ENST00000428956 CHMP4BQ9H444 224 aaKnown RBP20.53■□□□□ 0.88
C4A-243ENST00000428956 ARXQ96QS3 562 aa20.53■□□□□ 0.88
C4A-243ENST00000428956 ERICH6BQ5W0A0 696 aa20.53■□□□□ 0.88
C4A-243ENST00000428956 MS4A1P11836 297 aa20.52■□□□□ 0.88
C4A-243ENST00000428956 SETD5Q9C0A6 1442 aa20.51■□□□□ 0.87
C4A-243ENST00000428956 CASC1Q6TDU7 716 aa20.5■□□□□ 0.87
C4A-243ENST00000428956 NOP58Q9Y2X3 529 aaKnown RBP20.5■□□□□ 0.87
C4A-243ENST00000428956 FTSJ3Q8IY81 847 aaKnown RBP20.48■□□□□ 0.87
C4A-243ENST00000428956 NUDCQ9Y266 331 aa20.48■□□□□ 0.87
C4A-243ENST00000428956 TRHP20396 242 aaPredicted RBP20.48■□□□□ 0.87
C4A-243ENST00000428956 CARMIL1Q5VZK9 1371 aa20.47■□□□□ 0.87
C4A-243ENST00000428956 SOGA1O94964 1423 aa20.46■□□□□ 0.87
C4A-243ENST00000428956 PPP1R15AO75807 674 aaPredicted RBP20.46■□□□□ 0.87
C4A-243ENST00000428956 KCNH8Q96L42 1107 aa20.46■□□□□ 0.87
C4A-243ENST00000428956 CECR2Q9BXF3 1484 aa20.45■□□□□ 0.86
C4A-243ENST00000428956 MAPK8IP3Q9UPT6 1336 aa20.44■□□□□ 0.86
C4A-243ENST00000428956 ARHGAP35Q9NRY4 1499 aa20.42■□□□□ 0.86
C4A-243ENST00000428956 TMF1P82094 1093 aa20.41■□□□□ 0.86
C4A-243ENST00000428956 PNNQ9H307 717 aaKnown RBP20.41■□□□□ 0.86
C4A-243ENST00000428956 ARID4BQ4LE39 1312 aaPredicted RBP20.4■□□□□ 0.86
C4A-243ENST00000428956 CUX2O14529 1486 aa20.39■□□□□ 0.85
C4A-243ENST00000428956 B4GALNT3Q6L9W6 998 aa20.33■□□□□ 0.84
C4A-243ENST00000428956 CCDC88BA6NC98 1476 aa20.32■□□□□ 0.84
C4A-243ENST00000428956 PDS5BQ9NTI5 1447 aa20.32■□□□□ 0.84
C4A-243ENST00000428956 PTMAP06454 111 aaKnown RBP20.32■□□□□ 0.84
C4A-243ENST00000428956 RGS3P49796 1198 aa20.31■□□□□ 0.84
C4A-243ENST00000428956 HSPA5P11021 654 aaKnown RBP20.31■□□□□ 0.84
C4A-243ENST00000428956 CFAP44Q96MT7 982 aa20.3■□□□□ 0.84
C4A-243ENST00000428956 KANK1Q14678 1352 aa20.29■□□□□ 0.84
C4A-243ENST00000428956 LAS1LQ9Y4W2 734 aaKnown RBP20.29■□□□□ 0.84
C4A-243ENST00000428956 CC2D1BQ5T0F9 858 aaKnown RBP20.29■□□□□ 0.84
C4A-243ENST00000428956 ZRSR1Q15695 479 aaKnown RBP20.28■□□□□ 0.84
C4A-243ENST00000428956 TNNT2P45379 298 aaPredicted RBP20.28■□□□□ 0.84
C4A-243ENST00000428956 DCAF11Q8TEB1 546 aa20.28■□□□□ 0.84
C4A-243ENST00000428956 MROH2BQ7Z745 1585 aa20.28■□□□□ 0.84
C4A-243ENST00000428956 FRAT1Q92837 279 aaPredicted RBP20.28■□□□□ 0.84
C4A-243ENST00000428956 NEUROD2Q15784 382 aa20.27■□□□□ 0.84
C4A-243ENST00000428956 FMN1Q68DA7 1419 aa20.27■□□□□ 0.84
C4A-243ENST00000428956 RBM19Q9Y4C8 960 aaKnown RBP20.27■□□□□ 0.84
C4A-243ENST00000428956 KTN1Q86UP2 1357 aaKnown RBP20.26■□□□□ 0.83
C4A-243ENST00000428956 POGKQ9P215 609 aa20.25■□□□□ 0.83
C4A-243ENST00000428956 RAB3GAP2Q9H2M9 1393 aa20.25■□□□□ 0.83
C4A-243ENST00000428956 CDK11BP21127 795 aaKnown RBP20.25■□□□□ 0.83
C4A-243ENST00000428956 SMARCA2P51531 1590 aa20.25■□□□□ 0.83
C4A-243ENST00000428956 RALBP1Q15311 655 aa20.24■□□□□ 0.83
C4A-243ENST00000428956 HSP90AB1P08238 724 aaKnown RBP20.24■□□□□ 0.83
C4A-243ENST00000428956 L1TD1Q5T7N2 865 aaKnown RBP20.24■□□□□ 0.83
C4A-243ENST00000428956 HAP1P54257 671 aaPredicted RBP20.23■□□□□ 0.83
C4A-243ENST00000428956 C14orf37Q86TY3 774 aa20.23■□□□□ 0.83
C4A-243ENST00000428956 EIF4G1Q04637 1599 aaKnown RBP20.22■□□□□ 0.83
C4A-243ENST00000428956 SENP3-EIF4A1A0A087X0R7 540 aa20.21■□□□□ 0.83
C4A-243ENST00000428956 KANK4Q5T7N3 995 aaPredicted RBP20.21■□□□□ 0.83
C4A-243ENST00000428956 HSCBQ8IWL3 235 aa20.21■□□□□ 0.83
C4A-243ENST00000428956 ABCC8Q09428 1581 aa20.2■□□□□ 0.82
C4A-243ENST00000428956 TCERG1O14776 1098 aaKnown RBP20.19■□□□□ 0.82
C4A-243ENST00000428956 DNTTIP2Q5QJE6 756 aaKnown RBP20.19■□□□□ 0.82
C4A-243ENST00000428956 TOP2AP11388 1531 aaKnown RBP20.18■□□□□ 0.82
C4A-243ENST00000428956 ZBTB7CA1YPR0 619 aa20.16■□□□□ 0.82
C4A-243ENST00000428956 U2SURPO15042 1029 aaKnown RBP20.16■□□□□ 0.82
C4A-243ENST00000428956 NAP1L5Q96NT1 182 aaPredicted RBP20.16■□□□□ 0.82
C4A-243ENST00000428956 PTMSP20962 102 aa20.15■□□□□ 0.82
C4A-243ENST00000428956 PKD2Q13563 968 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms