RNA–Protein interactions for RNA: ENST00000428956.6

C4A-243, Transcript of complement C4A (Rodgers blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C4A, Length 5,460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-243ENST00000428956 KRTAP9-7A8MTY7 169 aa4.86□□□□□ -1.63
C4A-243ENST00000428956 ABCA13Q86UQ4 5058 aa4.86□□□□□ -1.63
C4A-243ENST00000428956 MT3P25713 68 aa4.85□□□□□ -1.63
C4A-243ENST00000428956 LPAP08519 4548 aa4.84□□□□□ -1.63
C4A-243ENST00000428956 EPPK1P58107 5090 aaKnown RBP4.83□□□□□ -1.64
C4A-243ENST00000428956 MT4P47944 62 aa4.79□□□□□ -1.64
C4A-243ENST00000428956 KRTAP6-3Q3LI67 103 aa4.76□□□□□ -1.65
C4A-243ENST00000428956 KRTAP19-7Q3SYF9 63 aa4.73□□□□□ -1.65
C4A-243ENST00000428956 PRM1P04553 51 aa4.71□□□□□ -1.65
C4A-243ENST00000428956 KRTAP2-3P0C7H8 128 aa4.71□□□□□ -1.66
C4A-243ENST00000428956 KRTAP2-4Q9BYR9 128 aa4.71□□□□□ -1.66
C4A-243ENST00000428956 KRTAP2-1Q9BYU5 128 aa4.71□□□□□ -1.66
C4A-243ENST00000428956 LOC100996750A0A140TA64 210 aa4.68□□□□□ -1.66
C4A-243ENST00000428956 MT1AP04731 61 aa4.66□□□□□ -1.66
C4A-243ENST00000428956 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.65□□□□□ -1.67
C4A-243ENST00000428956 KRTAP4-3Q9BYR4 195 aa4.63□□□□□ -1.67
C4A-243ENST00000428956 RNF213Q63HN8 5207 aa4.57□□□□□ -1.68
C4A-243ENST00000428956 LCE1AQ5T7P2 110 aa4.57□□□□□ -1.68
C4A-243ENST00000428956 FAT4Q6V0I7 4981 aa4.56□□□□□ -1.68
C4A-243ENST00000428956 UBR4Q5T4S7 5183 aa4.5□□□□□ -1.69
C4A-243ENST00000428956 HMCN2Q8NDA2 5059 aa4.49□□□□□ -1.69
C4A-243ENST00000428956 KRTAP2-2Q9BYT5 123 aa4.47□□□□□ -1.69
C4A-243ENST00000428956 SYNE1Q8NF91 8797 aaKnown RBP4.41□□□□□ -1.7
C4A-243ENST00000428956 LCE4AQ5TA78 99 aa4.41□□□□□ -1.7
C4A-243ENST00000428956 SYNE2Q8WXH0 6885 aaKnown RBP4.41□□□□□ -1.7
C4A-243ENST00000428956 LCE1DQ5T752 114 aa4.4□□□□□ -1.71
C4A-243ENST00000428956 LCE1BQ5T7P3 118 aa4.39□□□□□ -1.71
C4A-243ENST00000428956 KRTAP9-6A8MVA2 160 aa4.35□□□□□ -1.71
C4A-243ENST00000428956 KRTAP4-9Q9BYQ8 210 aa4.34□□□□□ -1.71
C4A-243ENST00000428956 LCE5AQ5TCM9 118 aa4.29□□□□□ -1.72
C4A-243ENST00000428956 KRTAP6-1Q3LI64 71 aa4.27□□□□□ -1.73
C4A-243ENST00000428956 KRTAP9-4Q9BYQ2 154 aa4.26□□□□□ -1.73
C4A-243ENST00000428956 FSIP2Q5CZC0 6907 aa4.23□□□□□ -1.73
C4A-243ENST00000428956 KRTAP6-2Q3LI66 62 aa4.2□□□□□ -1.74
C4A-243ENST00000428956 MUC2Q02817 5179 aa4.11□□□□□ -1.75
C4A-243ENST00000428956 OBSCNQ5VST9 7968 aa4.08□□□□□ -1.76
C4A-243ENST00000428956 KRTAP5-9P26371 169 aa3.93□□□□□ -1.78
C4A-243ENST00000428956 NEBP20929 6669 aa3.91□□□□□ -1.78
C4A-243ENST00000428956 KRTAP9-9Q9BYP9 154 aa3.87□□□□□ -1.79
C4A-243ENST00000428956 LCE1CQ5T751 118 aa3.81□□□□□ -1.8
C4A-243ENST00000428956 LCE1EQ5T753 118 aa3.81□□□□□ -1.8
C4A-243ENST00000428956 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
C4A-243ENST00000428956 SSPOA2VEC9 5147 aa3.79□□□□□ -1.8
C4A-243ENST00000428956 USH2AO75445 5202 aa3.76□□□□□ -1.81
C4A-243ENST00000428956 FCGBPQ9Y6R7 5405 aaPredicted RBP3.66□□□□□ -1.82
C4A-243ENST00000428956 MACF1Q9UPN3 7388 aaKnown RBP3.62□□□□□ -1.83
C4A-243ENST00000428956 KRTAP20-2Q3LI61 65 aa3.56□□□□□ -1.84
C4A-243ENST00000428956 KRTAP4-6Q9BYQ5 205 aa3.52□□□□□ -1.85
C4A-243ENST00000428956 KRTAP5-4Q6L8H1 288 aa3.46□□□□□ -1.86
C4A-243ENST00000428956 KMT2DO14686 5537 aa3.43□□□□□ -1.86
C4A-243ENST00000428956 DSTQ03001 7570 aaKnown RBP3.42□□□□□ -1.86
C4A-243ENST00000428956 KRTAP4-11Q9BYQ6 195 aa3.41□□□□□ -1.86
C4A-243ENST00000428956 GPR98Q8WXG9 6306 aa3.33□□□□□ -1.88
C4A-243ENST00000428956 KRTAP5-5Q701N2 237 aaPredicted RBP3.3□□□□□ -1.88
C4A-243ENST00000428956 MDN1Q9NU22 5596 aa3.26□□□□□ -1.89
C4A-243ENST00000428956 MUC12Q9UKN1 5478 aa3.23□□□□□ -1.89
C4A-243ENST00000428956 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
C4A-243ENST00000428956 KRTAP5-3Q6L8H2 238 aa3.09□□□□□ -1.92
C4A-243ENST00000428956 KRTAP4-12Q9BQ66 201 aa3.04□□□□□ -1.92
C4A-243ENST00000428956 KRTAP4-2Q9BYR5 136 aa3.04□□□□□ -1.92
C4A-243ENST00000428956 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
C4A-243ENST00000428956 AHNAK2Q8IVF2 5795 aa2.89□□□□□ -1.95
C4A-243ENST00000428956 HMCN1Q96RW7 5635 aa2.78□□□□□ -1.96
C4A-243ENST00000428956 MUC5ACP98088 5654 aa2.76□□□□□ -1.97
C4A-243ENST00000428956 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
C4A-243ENST00000428956 KRTAP5-10Q6L8G5 202 aa2.65□□□□□ -1.99
C4A-243ENST00000428956 KRTAP5-2Q701N4 177 aa2.62□□□□□ -1.99
C4A-243ENST00000428956 PHGR1C9JFL3 82 aa2.55□□□□□ -2
C4A-243ENST00000428956 AHNAKQ09666 5890 aaKnown RBP2.43□□□□□ -2.02
C4A-243ENST00000428956 KRTAP5-11Q6L8G4 156 aa2.37□□□□□ -2.03
C4A-243ENST00000428956 KRTAP5-7Q6L8G8 165 aa2.37□□□□□ -2.03
C4A-243ENST00000428956 MUC5BQ9HC84 5762 aaPredicted RBP2.35□□□□□ -2.03
C4A-243ENST00000428956 KRTAP5-1Q6L8H4 278 aa2.28□□□□□ -2.04
C4A-243ENST00000428956 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
C4A-243ENST00000428956 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.18□□□□□ -2.06
C4A-243ENST00000428956 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.06
C4A-243ENST00000428956 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 14.7 ms