RNA–Protein interactions for RNA: ENST00000428956.6

C4A-243, Transcript of complement C4A (Rodgers blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C4A, Length 5,460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-243ENST00000428956 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.98■□□□□ 0.317e-15■■■■■ 58.6
C4A-243ENST00000428956 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.05□□□□□ -0.485e-14■□□□□ 10.1
C4A-243ENST00000428956 WRNQ14191 1432 aaPredicted RBP eCLIP20.99■□□□□ 0.959e-14■■■■■ 43.9
C4A-243ENST00000428956 PABPC4Q13310 644 aaKnown RBP eCLIP17.13■□□□□ 0.332e-12■■■■■ 82.5
C4A-243ENST00000428956 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.23■□□□□ 0.353e-11■■■■■ 53.8
C4A-243ENST00000428956 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.32■□□□□ 0.364e-11■■■■■ 90.6
C4A-243ENST00000428956 RBM22Q9NW64 420 aaKnown RBP eCLIP16.14■□□□□ 0.173e-10■■■■■ 41.9
C4A-243ENST00000428956 SND1Q7KZF4 910 aaKnown RBP eCLIP17.49■□□□□ 0.394e-10■■■■□ 21.5
C4A-243ENST00000428956 GPKOWQ92917 476 aaPredicted RBP eCLIP17.26■□□□□ 0.354e-10■■■■■ 31.5
C4A-243ENST00000428956 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.78■□□□□ 0.447e-10■■■□□ 15.6
C4A-243ENST00000428956 NPM1P06748 294 aaKnown RBP eCLIP21.3■■□□□ 11e-9■■■■■ 69
C4A-243ENST00000428956 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.15■□□□□ 0.021e-9■■■■■ 62.2
C4A-243ENST00000428956 LARP4Q71RC2 724 aaKnown RBP eCLIP15.05■□□□□ -05e-9■■■■□ 26.5
C4A-243ENST00000428956 NSUN2Q08J23 767 aaKnown RBP eCLIP16.58■□□□□ 0.249e-9■■■■■ 35.6
C4A-243ENST00000428956 NIP7Q9Y221 180 aaKnown RBP eCLIP17.78■□□□□ 0.441e-8■■□□□ 12
C4A-243ENST00000428956 RPS3P23396 243 aaKnown RBP eCLIP15.15■□□□□ 0.022e-8■■■□□ 19.1
C4A-243ENST00000428956 PPIGQ13427 754 aaKnown RBP eCLIP15.35■□□□□ 0.052e-8■■□□□ 14.2
C4A-243ENST00000428956 PCBP1Q15365 356 aaKnown RBP eCLIP16.07■□□□□ 0.163e-8■■□□□ 14.4
C4A-243ENST00000428956 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.93■□□□□ 0.32e-7■□□□□ 10.3
C4A-243ENST00000428956 NOLC1Q14978 699 aaKnown RBP eCLIP18.15■□□□□ 0.52e-7■■□□□ 13.7
C4A-243ENST00000428956 TROVE2P10155 538 aaKnown RBP eCLIP17.35■□□□□ 0.375e-7■■□□□ 12.9
C4A-243ENST00000428956 AQRO60306 1485 aaKnown RBP eCLIP19.05■□□□□ 0.648e-7■■■■■ 26.8
C4A-243ENST00000428956 DDX3XO00571 662 aaKnown RBP eCLIP16.27■□□□□ 0.191e-6■■■■■ 48.4
C4A-243ENST00000428956 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.38■□□□□ 0.211e-6■■■■□ 26
C4A-243ENST00000428956 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.21■□□□□ 0.032e-6■□□□□ 8.3
C4A-243ENST00000428956 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.53■□□□□ 0.42e-6■■■■□ 22
C4A-243ENST00000428956 RPS11P62280 158 aaKnown RBP eCLIP13.66□□□□□ -0.223e-6■■■■■ 46.6
C4A-243ENST00000428956 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.79□□□□□ -0.041e-5■■■■□ 21.4
C4A-243ENST00000428956 SMNDC1O75940 238 aaKnown RBP eCLIP16.02■□□□□ 0.151e-5■■□□□ 11.9
Retrieved 29 of 29 RNA–protein pairs in 6.9 ms