RNA–Protein interactions for RNA: ENST00000425970.5

GARNL3-203, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-203ENST00000425970 CCDC61Q9Y6R9 512 aa10.64□□□□□ -0.71
GARNL3-203ENST00000425970 FAM212AQ96EL1 285 aa10.63□□□□□ -0.71
GARNL3-203ENST00000425970 VASPP50552 380 aaPredicted RBP10.62□□□□□ -0.71
GARNL3-203ENST00000425970 KLHL34Q8N239 644 aa10.62□□□□□ -0.71
GARNL3-203ENST00000425970 MS4A3Q96HJ5 214 aa10.61□□□□□ -0.71
GARNL3-203ENST00000425970 NUBP1P53384 320 aa10.59□□□□□ -0.71
GARNL3-203ENST00000425970 LHX8Q68G74 356 aa10.59□□□□□ -0.71
GARNL3-203ENST00000425970 KIF12Q96FN5 646 aa10.58□□□□□ -0.72
GARNL3-203ENST00000425970 MAP3K13O43283 966 aa10.54□□□□□ -0.72
GARNL3-203ENST00000425970 DCAF8Q5TAQ9 597 aa10.53□□□□□ -0.72
GARNL3-203ENST00000425970 ASTLQ6HA08 431 aaPredicted RBP10.5□□□□□ -0.73
GARNL3-203ENST00000425970 PCDHB13Q9Y5F0 798 aa10.5□□□□□ -0.73
GARNL3-203ENST00000425970 ATMINO43313 823 aaPredicted RBP10.48□□□□□ -0.73
GARNL3-203ENST00000425970 SGIP1Q9BQI5 828 aa10.48□□□□□ -0.73
GARNL3-203ENST00000425970 GSE1Q14687 1217 aa10.46□□□□□ -0.73
GARNL3-203ENST00000425970 SLC39A7Q92504 469 aa10.46□□□□□ -0.73
GARNL3-203ENST00000425970 C7P10643 843 aa10.45□□□□□ -0.74
GARNL3-203ENST00000425970 TIE1P35590 1138 aa10.45□□□□□ -0.74
GARNL3-203ENST00000425970 PELP1Q8IZL8 1130 aaKnown RBP10.44□□□□□ -0.74
GARNL3-203ENST00000425970 METRNQ9UJH8 293 aa10.44□□□□□ -0.74
GARNL3-203ENST00000425970 BMP2KQ9NSY1 1161 aaPredicted RBP10.43□□□□□ -0.74
GARNL3-203ENST00000425970 PYGBP11216 843 aa10.42□□□□□ -0.74
GARNL3-203ENST00000425970 ATN1P54259 1190 aaPredicted RBP10.42□□□□□ -0.74
GARNL3-203ENST00000425970 SPOCK2Q92563 424 aa10.41□□□□□ -0.74
GARNL3-203ENST00000425970 TRPC6Q9Y210 931 aa10.41□□□□□ -0.74
GARNL3-203ENST00000425970 IFNL1Q8IU54 200 aa10.4□□□□□ -0.74
GARNL3-203ENST00000425970 IFNLR1Q8IU57 520 aaPredicted RBP10.39□□□□□ -0.75
GARNL3-203ENST00000425970 TTLL13PA6NNM8 815 aa10.37□□□□□ -0.75
GARNL3-203ENST00000425970 CIZ1Q9ULV3 898 aaPredicted RBP10.36□□□□□ -0.75
GARNL3-203ENST00000425970 TMEM106CQ9BVX2 250 aa10.35□□□□□ -0.75
GARNL3-203ENST00000425970 SEC24BO95487 1268 aa10.34□□□□□ -0.75
GARNL3-203ENST00000425970 TRIM35Q9UPQ4 493 aa10.33□□□□□ -0.76
GARNL3-203ENST00000425970 ZNF467Q7Z7K2 595 aaPredicted RBP10.32□□□□□ -0.76
GARNL3-203ENST00000425970 POTEB2H3BUK9 544 aa10.3□□□□□ -0.76
GARNL3-203ENST00000425970 MAMSTRQ6ZN01 415 aa10.3□□□□□ -0.76
GARNL3-203ENST00000425970 PCDHB8Q9UN66 801 aa10.3□□□□□ -0.76
GARNL3-203ENST00000425970 CHRM1P11229 460 aaPredicted RBP10.29□□□□□ -0.76
GARNL3-203ENST00000425970 IER5LQ5T953 404 aa10.29□□□□□ -0.76
GARNL3-203ENST00000425970 OTUD5Q96G74 571 aa10.26□□□□□ -0.77
GARNL3-203ENST00000425970 SCUBE2Q9NQ36 999 aa10.26□□□□□ -0.77
GARNL3-203ENST00000425970 NISCHQ9Y2I1 1504 aa10.26□□□□□ -0.77
GARNL3-203ENST00000425970 GOLGA2Q08379 1002 aa10.24□□□□□ -0.77
GARNL3-203ENST00000425970 PLCG2P16885 1265 aa10.23□□□□□ -0.77
GARNL3-203ENST00000425970 TRIM41Q8WV44 630 aa10.23□□□□□ -0.77
GARNL3-203ENST00000425970 COLQQ9Y215 455 aaPredicted RBP10.21□□□□□ -0.77
GARNL3-203ENST00000425970 PSEN1P49768 467 aa10.19□□□□□ -0.78
GARNL3-203ENST00000425970 POTEFA5A3E0 1075 aa10.18□□□□□ -0.78
GARNL3-203ENST00000425970 MKRN3Q13064 507 aaKnown RBP10.18□□□□□ -0.78
GARNL3-203ENST00000425970 PDAP1Q13442 181 aaKnown RBP10.18□□□□□ -0.78
GARNL3-203ENST00000425970 POTEJP0CG39 1038 aa10.17□□□□□ -0.78
GARNL3-203ENST00000425970 OCEL1Q9H607 264 aa10.15□□□□□ -0.78
GARNL3-203ENST00000425970 IRX5P78411 483 aaPredicted RBP10.13□□□□□ -0.79
GARNL3-203ENST00000425970 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.08□□□□□ -0.8
GARNL3-203ENST00000425970 CABP2Q9NPB3 220 aa10.07□□□□□ -0.8
GARNL3-203ENST00000425970 RIOK3O14730 519 aaKnown RBP10.06□□□□□ -0.8
GARNL3-203ENST00000425970 SLAIN1Q8ND83 568 aa10.04□□□□□ -0.8
GARNL3-203ENST00000425970 L3MBTL3Q96JM7 780 aaPredicted RBP10.03□□□□□ -0.8
GARNL3-203ENST00000425970 TAOK2Q9UL54 1235 aa10.03□□□□□ -0.8
GARNL3-203ENST00000425970 G3V3G9 751 aa10.02□□□□□ -0.81
GARNL3-203ENST00000425970 C3orf67Q6ZVT6 689 aa10.02□□□□□ -0.81
GARNL3-203ENST00000425970 FAM163AQ96GL9 167 aaPredicted RBP10.02□□□□□ -0.81
GARNL3-203ENST00000425970 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.02□□□□□ -0.81
GARNL3-203ENST00000425970 PDCD7Q8N8D1 485 aaKnown RBP10.01□□□□□ -0.81
GARNL3-203ENST00000425970 VGFO15240 615 aaPredicted RBP10□□□□□ -0.81
GARNL3-203ENST00000425970 ECM2O94769 699 aaPredicted RBP9.98□□□□□ -0.81
GARNL3-203ENST00000425970 POTEMA6NI47 508 aa9.96□□□□□ -0.82
GARNL3-203ENST00000425970 RNF25Q96BH1 459 aaPredicted RBP9.96□□□□□ -0.82
GARNL3-203ENST00000425970 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.95□□□□□ -0.82
GARNL3-203ENST00000425970 POTEGQ6S5H5 508 aa9.95□□□□□ -0.82
GARNL3-203ENST00000425970 ZFP91Q96JP5 570 aaPredicted RBP9.95□□□□□ -0.82
GARNL3-203ENST00000425970 EFCAB3Q8N7B9 438 aa9.94□□□□□ -0.82
GARNL3-203ENST00000425970 SNPHO15079 494 aa9.92□□□□□ -0.82
GARNL3-203ENST00000425970 ILDR1Q86SU0 546 aaPredicted RBP9.92□□□□□ -0.82
GARNL3-203ENST00000425970 BOLA1Q9Y3E2 137 aa9.91□□□□□ -0.82
GARNL3-203ENST00000425970 DPY19L2Q6NUT2 758 aa9.9□□□□□ -0.82
GARNL3-203ENST00000425970 SOX12O15370 315 aa9.89□□□□□ -0.83
GARNL3-203ENST00000425970 BCL11BQ9C0K0 894 aaPredicted RBP9.88□□□□□ -0.83
GARNL3-203ENST00000425970 STK25O00506 426 aa9.87□□□□□ -0.83
GARNL3-203ENST00000425970 STK24Q9Y6E0 443 aa9.87□□□□□ -0.83
GARNL3-203ENST00000425970 PKD2Q13563 968 aa9.86□□□□□ -0.83
GARNL3-203ENST00000425970 PCDH10Q9P2E7 1040 aa9.84□□□□□ -0.83
GARNL3-203ENST00000425970 LCE2DQ5TA82 110 aaPredicted RBP9.83□□□□□ -0.84
GARNL3-203ENST00000425970 RGL2O15211 777 aa9.82□□□□□ -0.84
GARNL3-203ENST00000425970 ST18O60284 1047 aa9.82□□□□□ -0.84
GARNL3-203ENST00000425970 NLRP6P59044 892 aa9.82□□□□□ -0.84
GARNL3-203ENST00000425970 PHF8Q9UPP1 1060 aa9.82□□□□□ -0.84
GARNL3-203ENST00000425970 PLSCR2Q9NRY7 297 aa9.81□□□□□ -0.84
GARNL3-203ENST00000425970 TMEM121BQ9BXQ6 578 aaPredicted RBP9.8□□□□□ -0.84
GARNL3-203ENST00000425970 MICALL2Q8IY33 904 aa9.77□□□□□ -0.85
GARNL3-203ENST00000425970 MS4A4AQ96JQ5 239 aa9.75□□□□□ -0.85
GARNL3-203ENST00000425970 ZNF710Q8N1W2 664 aa9.72□□□□□ -0.85
GARNL3-203ENST00000425970 DOK7Q18PE1 504 aa9.71□□□□□ -0.86
GARNL3-203ENST00000425970 FBXO22Q8NEZ5 403 aa9.71□□□□□ -0.86
GARNL3-203ENST00000425970 MARVELD3Q96A59 401 aa9.71□□□□□ -0.86
GARNL3-203ENST00000425970 MFRPQ9BY79 579 aa9.71□□□□□ -0.86
GARNL3-203ENST00000425970 RIMBP2O15034 1052 aa9.7□□□□□ -0.86
GARNL3-203ENST00000425970 EMP3P54852 163 aa9.7□□□□□ -0.86
GARNL3-203ENST00000425970 CDAN1Q8IWY9 1227 aa9.7□□□□□ -0.86
GARNL3-203ENST00000425970 CHGAP10645 457 aaKnown RBP9.65□□□□□ -0.86
GARNL3-203ENST00000425970 HOXB3P14651 431 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms