RNA–Protein interactions for RNA: ENST00000425970.5

GARNL3-203, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-203ENST00000425970 AEBP2Q6ZN18 517 aaPredicted RBP21.33■■□□□ 1.01
GARNL3-203ENST00000425970 CHIC1Q5VXU3 224 aa20.49■□□□□ 0.87
GARNL3-203ENST00000425970 SENP3Q9H4L4 574 aaPredicted RBP18.31■□□□□ 0.52
GARNL3-203ENST00000425970 PHF23Q9BUL5 403 aaPredicted RBP18.05■□□□□ 0.48
GARNL3-203ENST00000425970 FOXD1Q16676 465 aa16.96■□□□□ 0.31
GARNL3-203ENST00000425970 PLPPR3Q6T4P5 718 aa16.52■□□□□ 0.24
GARNL3-203ENST00000425970 PIAS4Q8N2W9 510 aaPredicted RBP15.97■□□□□ 0.15
GARNL3-203ENST00000425970 ADRA2BP18089 450 aa15.96■□□□□ 0.15
GARNL3-203ENST00000425970 PPP6R1Q9UPN7 881 aa15.95■□□□□ 0.14
GARNL3-203ENST00000425970 MSH5O43196 834 aa15.9■□□□□ 0.14
GARNL3-203ENST00000425970 POTEDQ86YR6 584 aa15.15■□□□□ 0.02
GARNL3-203ENST00000425970 SCAF1Q9H7N4 1312 aaKnown RBP14.73□□□□□ -0.05
GARNL3-203ENST00000425970 MAPK8IP2Q13387 824 aaPredicted RBP14.58□□□□□ -0.08
GARNL3-203ENST00000425970 DMRT2Q9Y5R5 561 aa14.5□□□□□ -0.09
GARNL3-203ENST00000425970 PPP4R3CPQ6ZMV5 832 aa14.47□□□□□ -0.09
GARNL3-203ENST00000425970 CNKSR2Q8WXI2 1034 aa14.18□□□□□ -0.14
GARNL3-203ENST00000425970 NCBP3Q53F19 620 aaKnown RBP14.07□□□□□ -0.16
GARNL3-203ENST00000425970 DCAF8L1A6NGE4 600 aa14.01□□□□□ -0.17
GARNL3-203ENST00000425970 HOXD11P31277 338 aaPredicted RBP14.01□□□□□ -0.17
GARNL3-203ENST00000425970 RNF216Q9NWF9 866 aaPredicted RBP14□□□□□ -0.17
GARNL3-203ENST00000425970 NPM3O75607 178 aaKnown RBP13.74□□□□□ -0.21
GARNL3-203ENST00000425970 KCNA4P22459 653 aa13.62□□□□□ -0.23
GARNL3-203ENST00000425970 CACNB1Q02641 598 aaPredicted RBP13.56□□□□□ -0.24
GARNL3-203ENST00000425970 RNF39Q9H2S5 420 aa13.52□□□□□ -0.25
GARNL3-203ENST00000425970 DNAJC5BQ9UF47 199 aa13.51□□□□□ -0.25
GARNL3-203ENST00000425970 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.46□□□□□ -0.25
GARNL3-203ENST00000425970 C1QBPQ07021 282 aaKnown RBP13.39□□□□□ -0.27
GARNL3-203ENST00000425970 U3KPZ7 1027 aaPredicted RBP13.09□□□□□ -0.31
GARNL3-203ENST00000425970 SLC4A2P04920 1241 aa13.03□□□□□ -0.32
GARNL3-203ENST00000425970 SLC4A1APQ9BWU0 796 aaKnown RBP12.96□□□□□ -0.33
GARNL3-203ENST00000425970 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.92□□□□□ -0.34
GARNL3-203ENST00000425970 CAPN15O75808 1086 aa12.92□□□□□ -0.34
GARNL3-203ENST00000425970 APLP2Q06481 763 aa12.92□□□□□ -0.34
GARNL3-203ENST00000425970 HNRNPUL2Q1KMD3 747 aaKnown RBP12.92□□□□□ -0.34
GARNL3-203ENST00000425970 SPINK5Q9NQ38 1064 aaPredicted RBP12.86□□□□□ -0.35
GARNL3-203ENST00000425970 SAMD1Q6SPF0 538 aaPredicted RBP12.82□□□□□ -0.36
GARNL3-203ENST00000425970 MYCNP04198 464 aaPredicted RBP12.77□□□□□ -0.37
GARNL3-203ENST00000425970 TRHP20396 242 aaPredicted RBP12.74□□□□□ -0.37
GARNL3-203ENST00000425970 ZNF219Q9P2Y4 722 aaPredicted RBP12.74□□□□□ -0.37
GARNL3-203ENST00000425970 DSG3P32926 999 aa12.71□□□□□ -0.37
GARNL3-203ENST00000425970 FOXD4L1Q9NU39 408 aa12.7□□□□□ -0.38
GARNL3-203ENST00000425970 ABCB7O75027 752 aa12.59□□□□□ -0.39
GARNL3-203ENST00000425970 ZBTB22O15209 634 aa12.47□□□□□ -0.41
GARNL3-203ENST00000425970 POLA2Q14181 598 aa12.41□□□□□ -0.42
GARNL3-203ENST00000425970 ATF5Q9Y2D1 282 aaPredicted RBP12.34□□□□□ -0.43
GARNL3-203ENST00000425970 ATXN8OSP0DMR3 200 aa12.31□□□□□ -0.44
GARNL3-203ENST00000425970 ZBTB12Q9Y330 459 aaPredicted RBP12.26□□□□□ -0.45
GARNL3-203ENST00000425970 RBM42Q9BTD8 480 aaKnown RBP12.24□□□□□ -0.45
GARNL3-203ENST00000425970 EHMT2Q96KQ7 1210 aa12.12□□□□□ -0.47
GARNL3-203ENST00000425970 CSRNP3Q8WYN3 585 aa12.08□□□□□ -0.48
GARNL3-203ENST00000425970 FBLN2P98095 1184 aa12.03□□□□□ -0.48
GARNL3-203ENST00000425970 OSCARQ8IYS5 282 aa12□□□□□ -0.49
GARNL3-203ENST00000425970 POTEHQ6S545 545 aa11.95□□□□□ -0.5
GARNL3-203ENST00000425970 AKT1S1Q96B36 256 aa11.94□□□□□ -0.5
GARNL3-203ENST00000425970 CHRDL2Q6WN34 429 aa11.85□□□□□ -0.51
GARNL3-203ENST00000425970 SPDYE2BA6NHP3 402 aa11.84□□□□□ -0.51
GARNL3-203ENST00000425970 SPDYE6P0CI01 402 aa11.84□□□□□ -0.51
GARNL3-203ENST00000425970 SPDYE2Q495Y8 402 aa11.84□□□□□ -0.51
GARNL3-203ENST00000425970 REM2Q8IYK8 340 aaPredicted RBP11.81□□□□□ -0.52
GARNL3-203ENST00000425970 MKRN4PQ13434 485 aaPredicted RBP11.8□□□□□ -0.52
GARNL3-203ENST00000425970 ZNF692Q9BU19 519 aaPredicted RBP11.74□□□□□ -0.53
GARNL3-203ENST00000425970 PITPNM1O00562 1244 aa11.67□□□□□ -0.54
GARNL3-203ENST00000425970 SSUH2Q9Y2M2 353 aa11.63□□□□□ -0.55
GARNL3-203ENST00000425970 SPDYE1Q8NFV5 336 aaPredicted RBP11.61□□□□□ -0.55
GARNL3-203ENST00000425970 CLEC11AQ9Y240 323 aa11.59□□□□□ -0.55
GARNL3-203ENST00000425970 PIP4P2Q8N4L2 257 aa11.57□□□□□ -0.56
GARNL3-203ENST00000425970 PABPN1Q86U42 306 aaKnown RBP eCLIP11.55□□□□□ -0.56
GARNL3-203ENST00000425970 FXR2P51116 673 aaKnown RBP eCLIP11.5□□□□□ -0.57
GARNL3-203ENST00000425970 SPDYE4A6NLX3 237 aa11.43□□□□□ -0.58
GARNL3-203ENST00000425970 PRR29P0C7W0 189 aa11.42□□□□□ -0.58
GARNL3-203ENST00000425970 PRKAR2AP13861 404 aaKnown RBP11.4□□□□□ -0.58
GARNL3-203ENST00000425970 HAX1O00165 279 aa11.39□□□□□ -0.59
GARNL3-203ENST00000425970 STAG3Q9UJ98 1225 aa11.33□□□□□ -0.6
GARNL3-203ENST00000425970 CHADLQ6NUI6 762 aa11.28□□□□□ -0.6
GARNL3-203ENST00000425970 SP7Q8TDD2 431 aaPredicted RBP11.28□□□□□ -0.6
GARNL3-203ENST00000425970 FARP1Q9Y4F1 1045 aaPredicted RBP11.15□□□□□ -0.62
GARNL3-203ENST00000425970 C19orf67A6NJJ6 358 aa11.14□□□□□ -0.63
GARNL3-203ENST00000425970 EVX2Q03828 476 aa11.11□□□□□ -0.63
GARNL3-203ENST00000425970 CREBZFQ9NS37 354 aa11.09□□□□□ -0.63
GARNL3-203ENST00000425970 PROM2Q8N271 834 aa11.08□□□□□ -0.64
GARNL3-203ENST00000425970 CD44P16070 742 aaKnown RBP11.06□□□□□ -0.64
GARNL3-203ENST00000425970 FKBP8Q14318 412 aa11.03□□□□□ -0.64
GARNL3-203ENST00000425970 NPM1P06748 294 aaKnown RBP eCLIP11.01□□□□□ -0.65
GARNL3-203ENST00000425970 PLEKHG5O94827 1062 aa11□□□□□ -0.65
GARNL3-203ENST00000425970 PAK3O75914 559 aaPredicted RBP10.97□□□□□ -0.65
GARNL3-203ENST00000425970 GABBR2O75899 941 aa10.94□□□□□ -0.66
GARNL3-203ENST00000425970 ZRANB1Q9UGI0 708 aa10.94□□□□□ -0.66
GARNL3-203ENST00000425970 MIER1Q8N108 512 aa10.93□□□□□ -0.66
GARNL3-203ENST00000425970 CLCN6P51797 869 aa10.92□□□□□ -0.66
GARNL3-203ENST00000425970 PLCD3Q8N3E9 789 aa10.89□□□□□ -0.67
GARNL3-203ENST00000425970 MNX1P50219 401 aaPredicted RBP10.87□□□□□ -0.67
GARNL3-203ENST00000425970 ZNF579Q8NAF0 562 aaKnown RBP10.87□□□□□ -0.67
GARNL3-203ENST00000425970 FBXO3Q9UK99 471 aa10.82□□□□□ -0.68
GARNL3-203ENST00000425970 ZBTB47Q9UFB7 747 aaPredicted RBP10.81□□□□□ -0.68
GARNL3-203ENST00000425970 DCBLD2Q96PD2 775 aa10.79□□□□□ -0.68
GARNL3-203ENST00000425970 TSPYL2Q9H2G4 693 aaPredicted RBP10.77□□□□□ -0.69
GARNL3-203ENST00000425970 PHF12Q96QT6 1004 aa10.76□□□□□ -0.69
GARNL3-203ENST00000425970 GALR2O43603 387 aaPredicted RBP10.7□□□□□ -0.7
GARNL3-203ENST00000425970 RASEFQ8IZ41 740 aa10.66□□□□□ -0.7
GARNL3-203ENST00000425970 POTEIP0CG38 1075 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms