RNA–Protein interactions for RNA: ENST00000424649.6

PXN-204, Transcript of paxillin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PXN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-204ENST00000424649 CFTRP13569 1480 aa17.57■□□□□ 0.4
PXN-204ENST00000424649 BIVM-ERCC5R4GMW8 1640 aa17.56■□□□□ 0.4
PXN-204ENST00000424649 CCNB3Q8WWL7 1395 aa17.52■□□□□ 0.4
PXN-204ENST00000424649 ANP32EQ9BTT0 268 aa17.52■□□□□ 0.39
PXN-204ENST00000424649 RAB3GAP2Q9H2M9 1393 aa17.5■□□□□ 0.39
PXN-204ENST00000424649 FAM9BQ8IZU0 186 aa17.5■□□□□ 0.39
PXN-204ENST00000424649 ZNF326Q5BKZ1 582 aaKnown RBP17.49■□□□□ 0.39
PXN-204ENST00000424649 CUX1P39880 1505 aa17.46■□□□□ 0.38
PXN-204ENST00000424649 TONSLQ96HA7 1378 aa17.44■□□□□ 0.38
PXN-204ENST00000424649 KIF21BO75037 1637 aa17.44■□□□□ 0.38
PXN-204ENST00000424649 RRP7BPQ9NSQ0 103 aa17.43■□□□□ 0.38
PXN-204ENST00000424649 CADPSQ9ULU8 1353 aa17.43■□□□□ 0.38
PXN-204ENST00000424649 RBM19Q9Y4C8 960 aaKnown RBP17.43■□□□□ 0.38
PXN-204ENST00000424649 CDK11AQ9UQ88 783 aaPredicted RBP17.4■□□□□ 0.38
PXN-204ENST00000424649 CLSPNQ9HAW4 1339 aa17.38■□□□□ 0.37
PXN-204ENST00000424649 KIF27Q86VH2 1401 aa17.36■□□□□ 0.37
PXN-204ENST00000424649 ARAP1Q96P48 1450 aa17.36■□□□□ 0.37
PXN-204ENST00000424649 FOXD1Q16676 465 aa17.35■□□□□ 0.37
PXN-204ENST00000424649 SALL2Q9Y467 1007 aaPredicted RBP17.33■□□□□ 0.37
PXN-204ENST00000424649 NBR1Q14596 966 aa17.31■□□□□ 0.36
PXN-204ENST00000424649 BCL11AQ9H165 835 aa17.31■□□□□ 0.36
PXN-204ENST00000424649 CUX2O14529 1486 aa17.29■□□□□ 0.36
PXN-204ENST00000424649 B4GALNT3Q6L9W6 998 aa17.29■□□□□ 0.36
PXN-204ENST00000424649 SETD5Q9C0A6 1442 aa17.28■□□□□ 0.36
PXN-204ENST00000424649 FANCD2Q9BXW9 1451 aa17.27■□□□□ 0.36
PXN-204ENST00000424649 PPP1R15AO75807 674 aaPredicted RBP17.26■□□□□ 0.35
PXN-204ENST00000424649 MRS2Q9HD23 443 aa17.26■□□□□ 0.35
PXN-204ENST00000424649 NESP48681 1621 aa17.25■□□□□ 0.35
PXN-204ENST00000424649 MTUS2Q5JR59 1369 aa17.24■□□□□ 0.35
PXN-204ENST00000424649 CARMIL1Q5VZK9 1371 aa17.23■□□□□ 0.35
PXN-204ENST00000424649 ERICH3Q5RHP9 1530 aa17.23■□□□□ 0.35
PXN-204ENST00000424649 PHLDB1Q86UU1 1377 aa17.22■□□□□ 0.35
PXN-204ENST00000424649 LAMC3Q9Y6N6 1575 aa17.22■□□□□ 0.35
PXN-204ENST00000424649 PRXQ9BXM0 1461 aa17.21■□□□□ 0.35
PXN-204ENST00000424649 NPM2Q86SE8 214 aaKnown RBP17.21■□□□□ 0.35
PXN-204ENST00000424649 FGD5Q6ZNL6 1462 aa17.21■□□□□ 0.35
PXN-204ENST00000424649 ZNF777Q9ULD5 760 aaPredicted RBP17.2■□□□□ 0.34
PXN-204ENST00000424649 FHOD3Q2V2M9 1422 aa17.19■□□□□ 0.34
PXN-204ENST00000424649 DNMBPQ6XZF7 1577 aa17.18■□□□□ 0.34
PXN-204ENST00000424649 HSPA5P11021 654 aaKnown RBP17.16■□□□□ 0.34
PXN-204ENST00000424649 WDR97A6NE52 1622 aa17.15■□□□□ 0.34
PXN-204ENST00000424649 ARHGAP35Q9NRY4 1499 aa17.15■□□□□ 0.34
PXN-204ENST00000424649 CCDC184Q52MB2 194 aa17.14■□□□□ 0.33
PXN-204ENST00000424649 DNAJC5BQ9UF47 199 aa17.14■□□□□ 0.33
PXN-204ENST00000424649 TOPBP1Q92547 1522 aa17.13■□□□□ 0.33
PXN-204ENST00000424649 EIF4G2P78344 907 aaKnown RBP eCLIP17.12■□□□□ 0.332e-7■■■■■ 49.6
PXN-204ENST00000424649 RRBP1Q9P2E9 1410 aaKnown RBP17.1■□□□□ 0.33
PXN-204ENST00000424649 IGF1RP08069 1367 aa17.09■□□□□ 0.33
PXN-204ENST00000424649 KDM2AQ9Y2K7 1162 aa17.09■□□□□ 0.33
PXN-204ENST00000424649 CCER2I3L3R5 266 aa17.08■□□□□ 0.32
PXN-204ENST00000424649 FBLN2P98095 1184 aa17.08■□□□□ 0.32
PXN-204ENST00000424649 KIF21AQ7Z4S6 1674 aa17.07■□□□□ 0.32
PXN-204ENST00000424649 POLA1P09884 1462 aaPredicted RBP17.07■□□□□ 0.32
PXN-204ENST00000424649 MSH5O43196 834 aa17.06■□□□□ 0.32
PXN-204ENST00000424649 PDS5BQ9NTI5 1447 aa17.06■□□□□ 0.32
PXN-204ENST00000424649 URB2Q14146 1524 aaKnown RBP17.06■□□□□ 0.32
PXN-204ENST00000424649 CCDC136Q96JN2 1154 aa17.05■□□□□ 0.32
PXN-204ENST00000424649 RAD54L2Q9Y4B4 1467 aa17.05■□□□□ 0.32
PXN-204ENST00000424649 SLC4A1APQ9BWU0 796 aaKnown RBP17.03■□□□□ 0.32
PXN-204ENST00000424649 ABCA10Q8WWZ4 1543 aa17.03■□□□□ 0.32
PXN-204ENST00000424649 L3MBTL2Q969R5 705 aa17.02■□□□□ 0.31
PXN-204ENST00000424649 TDRD9Q8NDG6 1382 aaKnown RBP17.02■□□□□ 0.31
PXN-204ENST00000424649 RTL5Q5HYW3 569 aaPredicted RBP17■□□□□ 0.31
PXN-204ENST00000424649 PPP4R2Q9NY27 417 aa16.98■□□□□ 0.31
PXN-204ENST00000424649 LRRC9Q6ZRR7 1453 aa16.97■□□□□ 0.31
PXN-204ENST00000424649 WASHC2AQ641Q2 1341 aa16.97■□□□□ 0.31
PXN-204ENST00000424649 FHAD1B1AJZ9 1412 aa16.97■□□□□ 0.31
PXN-204ENST00000424649 TMC1Q8TDI8 760 aa16.97■□□□□ 0.31
PXN-204ENST00000424649 MAPKBP1O60336 1514 aa16.95■□□□□ 0.3
PXN-204ENST00000424649 RTN4Q9NQC3 1192 aaKnown RBP16.95■□□□□ 0.3
PXN-204ENST00000424649 ANP32AP39687 249 aaKnown RBP16.93■□□□□ 0.3
PXN-204ENST00000424649 MPHOSPH9Q99550 1183 aa16.93■□□□□ 0.3
PXN-204ENST00000424649 CUL7Q14999 1698 aa16.93■□□□□ 0.3
PXN-204ENST00000424649 C11orf95C9JLR9 678 aaPredicted RBP16.92■□□□□ 0.3
PXN-204ENST00000424649 DEKP35659 375 aaKnown RBP16.91■□□□□ 0.3
PXN-204ENST00000424649 TIMELESSQ9UNS1 1208 aa16.91■□□□□ 0.3
PXN-204ENST00000424649 ABCA5Q8WWZ7 1642 aa16.9■□□□□ 0.3
PXN-204ENST00000424649 CCDC18Q5T9S5 1454 aa16.9■□□□□ 0.3
PXN-204ENST00000424649 LAS1LQ9Y4W2 734 aaKnown RBP16.9■□□□□ 0.3
PXN-204ENST00000424649 RGL3Q3MIN7 710 aa16.88■□□□□ 0.29
PXN-204ENST00000424649 PRKRIP1Q9H875 184 aaPredicted RBP16.88■□□□□ 0.29
PXN-204ENST00000424649 ZBTB47Q9UFB7 747 aaPredicted RBP16.86■□□□□ 0.29
PXN-204ENST00000424649 ZNF644Q9H582 1327 aaPredicted RBP16.86■□□□□ 0.29
PXN-204ENST00000424649 TARBP1Q13395 1621 aaKnown RBP16.86■□□□□ 0.29
PXN-204ENST00000424649 MRC2Q9UBG0 1479 aa16.85■□□□□ 0.29
PXN-204ENST00000424649 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.84■□□□□ 0.291e-6■■□□□ 11.9
PXN-204ENST00000424649 NOP58Q9Y2X3 529 aaKnown RBP16.84■□□□□ 0.29
PXN-204ENST00000424649 CTTNBP2Q8WZ74 1663 aa16.84■□□□□ 0.29
PXN-204ENST00000424649 TIAM1Q13009 1591 aa16.83■□□□□ 0.29
PXN-204ENST00000424649 PAK3O75914 559 aaPredicted RBP16.83■□□□□ 0.29
PXN-204ENST00000424649 GAPVD1Q14C86 1478 aa16.83■□□□□ 0.28
PXN-204ENST00000424649 FGD6Q6ZV73 1430 aa16.82■□□□□ 0.28
PXN-204ENST00000424649 NBPF8Q3BBV2 869 aa16.81■□□□□ 0.28
PXN-204ENST00000424649 DAXXQ9UER7 740 aaPredicted RBP16.8■□□□□ 0.28
PXN-204ENST00000424649 CARD11Q9BXL7 1154 aa16.78■□□□□ 0.28
PXN-204ENST00000424649 PBRM1Q86U86 1689 aa16.78■□□□□ 0.28
PXN-204ENST00000424649 PTPRKQ15262 1439 aa16.77■□□□□ 0.27
PXN-204ENST00000424649 FMN1Q68DA7 1419 aa16.77■□□□□ 0.27
PXN-204ENST00000424649 MYT1LQ9UL68 1186 aa16.76■□□□□ 0.27
PXN-204ENST00000424649 CC2D1BQ5T0F9 858 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms