RNA–Protein interactions for RNA: ENST00000424307.5

PMS1-210, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-210ENST00000424307 PHF12Q96QT6 1004 aa6.74□□□□□ -1.33
PMS1-210ENST00000424307 TMEM121BQ9BXQ6 578 aaPredicted RBP6.72□□□□□ -1.33
PMS1-210ENST00000424307 POTEFA5A3E0 1075 aa6.68□□□□□ -1.34
PMS1-210ENST00000424307 MKRN4PQ13434 485 aaPredicted RBP6.67□□□□□ -1.34
PMS1-210ENST00000424307 MS4A3Q96HJ5 214 aa6.65□□□□□ -1.35
PMS1-210ENST00000424307 ATN1P54259 1190 aaPredicted RBP6.64□□□□□ -1.35
PMS1-210ENST00000424307 CREBZFQ9NS37 354 aa6.64□□□□□ -1.35
PMS1-210ENST00000424307 ATXN8OSP0DMR3 200 aa6.62□□□□□ -1.35
PMS1-210ENST00000424307 FOXD4L1Q9NU39 408 aa6.62□□□□□ -1.35
PMS1-210ENST00000424307 SLAIN1Q8ND83 568 aa6.59□□□□□ -1.35
PMS1-210ENST00000424307 SNPHO15079 494 aa6.58□□□□□ -1.36
PMS1-210ENST00000424307 NPM1P06748 294 aaKnown RBP eCLIP6.57□□□□□ -1.36
PMS1-210ENST00000424307 KRTAP3-3Q9BYR6 98 aa6.54□□□□□ -1.36
PMS1-210ENST00000424307 KRTAP3-2Q9BYR7 98 aa6.54□□□□□ -1.36
PMS1-210ENST00000424307 SEC24BO95487 1268 aa6.53□□□□□ -1.36
PMS1-210ENST00000424307 COLQQ9Y215 455 aaPredicted RBP6.52□□□□□ -1.37
PMS1-210ENST00000424307 STAG3Q9UJ98 1225 aa6.51□□□□□ -1.37
PMS1-210ENST00000424307 TIE1P35590 1138 aa6.5□□□□□ -1.37
PMS1-210ENST00000424307 BMP2KQ9NSY1 1161 aaPredicted RBP6.5□□□□□ -1.37
PMS1-210ENST00000424307 IER5LQ5T953 404 aa6.5□□□□□ -1.37
PMS1-210ENST00000424307 SLC4A1APQ9BWU0 796 aaKnown RBP6.5□□□□□ -1.37
PMS1-210ENST00000424307 MARVELD3Q96A59 401 aa6.48□□□□□ -1.37
PMS1-210ENST00000424307 RNF166Q96A37 237 aaPredicted RBP6.45□□□□□ -1.38
PMS1-210ENST00000424307 EMP3P54852 163 aa6.42□□□□□ -1.38
PMS1-210ENST00000424307 HS3ST6Q96QI5 342 aa6.41□□□□□ -1.38
PMS1-210ENST00000424307 MNX1P50219 401 aaPredicted RBP6.4□□□□□ -1.38
PMS1-210ENST00000424307 KIF12Q96FN5 646 aa6.4□□□□□ -1.39
PMS1-210ENST00000424307 POTEB3A0JP26 581 aa6.39□□□□□ -1.39
PMS1-210ENST00000424307 POTEBQ6S5H4 581 aa6.39□□□□□ -1.39
PMS1-210ENST00000424307 TTLL13PA6NNM8 815 aa6.37□□□□□ -1.39
PMS1-210ENST00000424307 CCDC61Q9Y6R9 512 aa6.36□□□□□ -1.39
PMS1-210ENST00000424307 FAM205CA6NFA0 338 aa6.34□□□□□ -1.39
PMS1-210ENST00000424307 TRPC6Q9Y210 931 aa6.34□□□□□ -1.39
PMS1-210ENST00000424307 MYT1LQ9UL68 1186 aa6.33□□□□□ -1.4
PMS1-210ENST00000424307 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.33□□□□□ -1.4
PMS1-210ENST00000424307 TRIM35Q9UPQ4 493 aa6.31□□□□□ -1.4
PMS1-210ENST00000424307 PLCG2P16885 1265 aa6.3□□□□□ -1.4
PMS1-210ENST00000424307 PTGER2P43116 358 aa6.3□□□□□ -1.4
PMS1-210ENST00000424307 TSPYL2Q9H2G4 693 aaPredicted RBP6.27□□□□□ -1.41
PMS1-210ENST00000424307 MAP3K13O43283 966 aa6.26□□□□□ -1.41
PMS1-210ENST00000424307 SGIP1Q9BQI5 828 aa6.25□□□□□ -1.41
PMS1-210ENST00000424307 IRX5P78411 483 aaPredicted RBP6.24□□□□□ -1.41
PMS1-210ENST00000424307 OCEL1Q9H607 264 aa6.2□□□□□ -1.42
PMS1-210ENST00000424307 ZBTB22O15209 634 aa6.2□□□□□ -1.42
PMS1-210ENST00000424307 PLA2G2EQ9NZK7 142 aa6.19□□□□□ -1.42
PMS1-210ENST00000424307 RGS20O76081 388 aa6.14□□□□□ -1.43
PMS1-210ENST00000424307 HOXB1P14653 301 aaPredicted RBP6.12□□□□□ -1.43
PMS1-210ENST00000424307 ERBB3P21860 1342 aa6.11□□□□□ -1.43
PMS1-210ENST00000424307 C3orf67Q6ZVT6 689 aa6.1□□□□□ -1.43
PMS1-210ENST00000424307 TMEM106CQ9BVX2 250 aa6.1□□□□□ -1.43
PMS1-210ENST00000424307 IRX2Q9BZI1 471 aaPredicted RBP6.08□□□□□ -1.44
PMS1-210ENST00000424307 L3MBTL3Q96JM7 780 aaPredicted RBP6.08□□□□□ -1.44
PMS1-210ENST00000424307 PCDHB13Q9Y5F0 798 aa6.08□□□□□ -1.44
PMS1-210ENST00000424307 ZNF687Q8N1G0 1237 aa6.07□□□□□ -1.44
PMS1-210ENST00000424307 HCSTQ9UBK5 93 aa6.06□□□□□ -1.44
PMS1-210ENST00000424307 HOXB3P14651 431 aaPredicted RBP6.03□□□□□ -1.44
PMS1-210ENST00000424307 VARS2Q5ST30 1063 aaKnown RBP6□□□□□ -1.45
PMS1-210ENST00000424307 IFNL1Q8IU54 200 aa6□□□□□ -1.45
PMS1-210ENST00000424307 ZNF710Q8N1W2 664 aa6□□□□□ -1.45
PMS1-210ENST00000424307 DOK7Q18PE1 504 aa5.99□□□□□ -1.45
PMS1-210ENST00000424307 RASEFQ8IZ41 740 aa5.99□□□□□ -1.45
PMS1-210ENST00000424307 PDCD7Q8N8D1 485 aaKnown RBP5.96□□□□□ -1.46
PMS1-210ENST00000424307 PLEKHG5O94827 1062 aa5.94□□□□□ -1.46
PMS1-210ENST00000424307 ANKRD13DQ6ZTN6 518 aa5.94□□□□□ -1.46
PMS1-210ENST00000424307 RIMBP2O15034 1052 aa5.94□□□□□ -1.46
PMS1-210ENST00000424307 ZSWIM6Q9HCJ5 1215 aa5.93□□□□□ -1.46
PMS1-210ENST00000424307 IFFO2Q5TF58 517 aa5.92□□□□□ -1.46
PMS1-210ENST00000424307 SPDYE4A6NLX3 237 aa5.91□□□□□ -1.46
PMS1-210ENST00000424307 LSM11P83369 360 aaKnown RBP eCLIP5.9□□□□□ -1.47
PMS1-210ENST00000424307 Q6ZNB5 142 aa5.85□□□□□ -1.47
PMS1-210ENST00000424307 LOC100996750A0A140TA64 210 aa5.84□□□□□ -1.47
PMS1-210ENST00000424307 KRTAP4-6Q9BYQ5 205 aa5.84□□□□□ -1.47
PMS1-210ENST00000424307 G3V3G9 751 aa5.82□□□□□ -1.48
PMS1-210ENST00000424307 PBX2P40425 430 aa5.82□□□□□ -1.48
PMS1-210ENST00000424307 MKRN3Q13064 507 aaKnown RBP5.82□□□□□ -1.48
PMS1-210ENST00000424307 DCAF8Q5TAQ9 597 aa5.82□□□□□ -1.48
PMS1-210ENST00000424307 ILDR1Q86SU0 546 aaPredicted RBP5.81□□□□□ -1.48
PMS1-210ENST00000424307 GPR153Q6NV75 609 aa5.8□□□□□ -1.48
PMS1-210ENST00000424307 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.79□□□□□ -1.485e-7■■■□□ 14.9
PMS1-210ENST00000424307 A0A0G2JS52 829 aa5.79□□□□□ -1.48
PMS1-210ENST00000424307 GOLGA2Q08379 1002 aa5.79□□□□□ -1.48
PMS1-210ENST00000424307 PROM2Q8N271 834 aa5.77□□□□□ -1.49
PMS1-210ENST00000424307 LAPTM4AQ15012 233 aa5.77□□□□□ -1.49
PMS1-210ENST00000424307 BOLA1Q9Y3E2 137 aa5.76□□□□□ -1.49
PMS1-210ENST00000424307 NUBP1P53384 320 aa5.76□□□□□ -1.49
PMS1-210ENST00000424307 ZNF316A6NFI3 1004 aaPredicted RBP5.74□□□□□ -1.49
PMS1-210ENST00000424307 MIER1Q8N108 512 aa5.74□□□□□ -1.49
PMS1-210ENST00000424307 CSRNP3Q8WYN3 585 aa5.74□□□□□ -1.49
PMS1-210ENST00000424307 FAM212AQ96EL1 285 aa5.74□□□□□ -1.49
PMS1-210ENST00000424307 ZBTB47Q9UFB7 747 aaPredicted RBP5.74□□□□□ -1.49
PMS1-210ENST00000424307 TRAF7Q6Q0C0 670 aa5.73□□□□□ -1.49
PMS1-210ENST00000424307 DPY19L2Q6NUT2 758 aa5.67□□□□□ -1.5
PMS1-210ENST00000424307 ADGRD1Q6QNK2 874 aa5.67□□□□□ -1.5
PMS1-210ENST00000424307 PCDHB8Q9UN66 801 aa5.67□□□□□ -1.5
PMS1-210ENST00000424307 TK2O00142 265 aa5.67□□□□□ -1.5
PMS1-210ENST00000424307 LCE2BO14633 110 aa5.67□□□□□ -1.5
PMS1-210ENST00000424307 ARSIQ5FYB1 569 aa5.65□□□□□ -1.51
PMS1-210ENST00000424307 ZNF775Q96BV0 537 aaPredicted RBP5.65□□□□□ -1.51
PMS1-210ENST00000424307 HRO43593 1189 aa5.64□□□□□ -1.51
PMS1-210ENST00000424307 POTEEQ6S8J3 1075 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms