RNA–Protein interactions for RNA: ENST00000424307.5

PMS1-210, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-210ENST00000424307 AEBP2Q6ZN18 517 aaPredicted RBP14.34□□□□□ -0.11
PMS1-210ENST00000424307 CHIC1Q5VXU3 224 aa13.51□□□□□ -0.25
PMS1-210ENST00000424307 POTEDQ86YR6 584 aa12.6□□□□□ -0.39
PMS1-210ENST00000424307 SENP3Q9H4L4 574 aaPredicted RBP12.5□□□□□ -0.41
PMS1-210ENST00000424307 PHF23Q9BUL5 403 aaPredicted RBP12.15□□□□□ -0.46
PMS1-210ENST00000424307 FOXD1Q16676 465 aa11.68□□□□□ -0.54
PMS1-210ENST00000424307 MSH5O43196 834 aa11.4□□□□□ -0.59
PMS1-210ENST00000424307 PIAS4Q8N2W9 510 aaPredicted RBP10.66□□□□□ -0.7
PMS1-210ENST00000424307 CACNB1Q02641 598 aaPredicted RBP10.26□□□□□ -0.77
PMS1-210ENST00000424307 PPP6R1Q9UPN7 881 aa10.16□□□□□ -0.78
PMS1-210ENST00000424307 ADRA2BP18089 450 aa10.06□□□□□ -0.8
PMS1-210ENST00000424307 PLPPR3Q6T4P5 718 aa9.84□□□□□ -0.83
PMS1-210ENST00000424307 DMRT2Q9Y5R5 561 aa9.76□□□□□ -0.85
PMS1-210ENST00000424307 POTEHQ6S545 545 aa9.7□□□□□ -0.86
PMS1-210ENST00000424307 RNF39Q9H2S5 420 aa9.58□□□□□ -0.88
PMS1-210ENST00000424307 MAPK8IP2Q13387 824 aaPredicted RBP9.51□□□□□ -0.89
PMS1-210ENST00000424307 C1QBPQ07021 282 aaKnown RBP9.46□□□□□ -0.9
PMS1-210ENST00000424307 SCAF1Q9H7N4 1312 aaKnown RBP9.39□□□□□ -0.91
PMS1-210ENST00000424307 DCAF8L1A6NGE4 600 aa9.26□□□□□ -0.93
PMS1-210ENST00000424307 DNAJC5BQ9UF47 199 aa9.08□□□□□ -0.96
PMS1-210ENST00000424307 HOXD11P31277 338 aaPredicted RBP9.06□□□□□ -0.96
PMS1-210ENST00000424307 RNF216Q9NWF9 866 aaPredicted RBP8.75□□□□□ -1.01
PMS1-210ENST00000424307 SP7Q8TDD2 431 aaPredicted RBP8.67□□□□□ -1.02
PMS1-210ENST00000424307 DSG3P32926 999 aa8.64□□□□□ -1.03
PMS1-210ENST00000424307 CNKSR2Q8WXI2 1034 aa8.58□□□□□ -1.04
PMS1-210ENST00000424307 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.55□□□□□ -1.044e-6■■□□□ 13.1
PMS1-210ENST00000424307 PPP4R3CPQ6ZMV5 832 aa8.46□□□□□ -1.06
PMS1-210ENST00000424307 CHRDL2Q6WN34 429 aa8.45□□□□□ -1.06
PMS1-210ENST00000424307 CAPN15O75808 1086 aa8.42□□□□□ -1.06
PMS1-210ENST00000424307 RBM42Q9BTD8 480 aaKnown RBP8.36□□□□□ -1.07
PMS1-210ENST00000424307 SPINK5Q9NQ38 1064 aaPredicted RBP8.36□□□□□ -1.07
PMS1-210ENST00000424307 PLSCR2Q9NRY7 297 aa8.29□□□□□ -1.08
PMS1-210ENST00000424307 U3KPZ7 1027 aaPredicted RBP8.25□□□□□ -1.09
PMS1-210ENST00000424307 HAX1O00165 279 aa8.14□□□□□ -1.11
PMS1-210ENST00000424307 LHX8Q68G74 356 aa8.12□□□□□ -1.11
PMS1-210ENST00000424307 ZNF219Q9P2Y4 722 aaPredicted RBP8.11□□□□□ -1.11
PMS1-210ENST00000424307 APLP2Q06481 763 aa8.1□□□□□ -1.11
PMS1-210ENST00000424307 ABCB7O75027 752 aa8.08□□□□□ -1.12
PMS1-210ENST00000424307 TRHP20396 242 aaPredicted RBP8.04□□□□□ -1.12
PMS1-210ENST00000424307 PIP4P2Q8N4L2 257 aa8.04□□□□□ -1.12
PMS1-210ENST00000424307 AKT1S1Q96B36 256 aa7.95□□□□□ -1.14
PMS1-210ENST00000424307 NCBP3Q53F19 620 aaKnown RBP7.94□□□□□ -1.14
PMS1-210ENST00000424307 EVX2Q03828 476 aa7.91□□□□□ -1.14
PMS1-210ENST00000424307 FXR2P51116 673 aaKnown RBP eCLIP7.9□□□□□ -1.14
PMS1-210ENST00000424307 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.84□□□□□ -1.15
PMS1-210ENST00000424307 HNRNPUL2Q1KMD3 747 aaKnown RBP7.84□□□□□ -1.15
PMS1-210ENST00000424307 REM2Q8IYK8 340 aaPredicted RBP7.82□□□□□ -1.16
PMS1-210ENST00000424307 PCDH10Q9P2E7 1040 aa7.77□□□□□ -1.17
PMS1-210ENST00000424307 GABBR2O75899 941 aa7.76□□□□□ -1.17
PMS1-210ENST00000424307 NPM3O75607 178 aaKnown RBP7.71□□□□□ -1.17
PMS1-210ENST00000424307 SAMD1Q6SPF0 538 aaPredicted RBP7.71□□□□□ -1.18
PMS1-210ENST00000424307 PITPNM1O00562 1244 aa7.7□□□□□ -1.18
PMS1-210ENST00000424307 C19orf67A6NJJ6 358 aa7.69□□□□□ -1.18
PMS1-210ENST00000424307 POTEMA6NI47 508 aa7.66□□□□□ -1.18
PMS1-210ENST00000424307 POLA2Q14181 598 aa7.66□□□□□ -1.18
PMS1-210ENST00000424307 SLC4A2P04920 1241 aa7.6□□□□□ -1.19
PMS1-210ENST00000424307 POTEGQ6S5H5 508 aa7.6□□□□□ -1.19
PMS1-210ENST00000424307 ZBTB12Q9Y330 459 aaPredicted RBP7.56□□□□□ -1.2
PMS1-210ENST00000424307 POTEIP0CG38 1075 aa7.55□□□□□ -1.2
PMS1-210ENST00000424307 CLCN6P51797 869 aa7.52□□□□□ -1.21
PMS1-210ENST00000424307 PRKAR2AP13861 404 aaKnown RBP7.5□□□□□ -1.21
PMS1-210ENST00000424307 OTUD5Q96G74 571 aa7.46□□□□□ -1.22
PMS1-210ENST00000424307 OSCARQ8IYS5 282 aa7.39□□□□□ -1.23
PMS1-210ENST00000424307 DCBLD2Q96PD2 775 aa7.36□□□□□ -1.23
PMS1-210ENST00000424307 SPDYE1Q8NFV5 336 aaPredicted RBP7.3□□□□□ -1.24
PMS1-210ENST00000424307 POTEB2H3BUK9 544 aa7.25□□□□□ -1.25
PMS1-210ENST00000424307 MYCNP04198 464 aaPredicted RBP7.22□□□□□ -1.25
PMS1-210ENST00000424307 CLEC11AQ9Y240 323 aa7.22□□□□□ -1.25
PMS1-210ENST00000424307 SPDYE2BA6NHP3 402 aa7.21□□□□□ -1.26
PMS1-210ENST00000424307 SPDYE6P0CI01 402 aa7.21□□□□□ -1.26
PMS1-210ENST00000424307 CD44P16070 742 aaKnown RBP7.21□□□□□ -1.26
PMS1-210ENST00000424307 SPDYE2Q495Y8 402 aa7.21□□□□□ -1.26
PMS1-210ENST00000424307 LCE2DQ5TA82 110 aaPredicted RBP7.2□□□□□ -1.26
PMS1-210ENST00000424307 MAMSTRQ6ZN01 415 aa7.16□□□□□ -1.26
PMS1-210ENST00000424307 CHADLQ6NUI6 762 aa7.15□□□□□ -1.27
PMS1-210ENST00000424307 FAM163AQ96GL9 167 aaPredicted RBP7.14□□□□□ -1.27
PMS1-210ENST00000424307 CDAN1Q8IWY9 1227 aa7.13□□□□□ -1.27
PMS1-210ENST00000424307 ZNF579Q8NAF0 562 aaKnown RBP7.12□□□□□ -1.27
PMS1-210ENST00000424307 MMRN1Q13201 1228 aa7.06□□□□□ -1.28
PMS1-210ENST00000424307 FARP1Q9Y4F1 1045 aaPredicted RBP7.05□□□□□ -1.28
PMS1-210ENST00000424307 PRR29P0C7W0 189 aa7.04□□□□□ -1.28
PMS1-210ENST00000424307 GALR2O43603 387 aaPredicted RBP7□□□□□ -1.29
PMS1-210ENST00000424307 POTEJP0CG39 1038 aa7□□□□□ -1.29
PMS1-210ENST00000424307 ATF5Q9Y2D1 282 aaPredicted RBP7□□□□□ -1.29
PMS1-210ENST00000424307 SCUBE2Q9NQ36 999 aa6.99□□□□□ -1.29
PMS1-210ENST00000424307 SPNS2Q8IVW8 549 aa6.99□□□□□ -1.29
PMS1-210ENST00000424307 SSUH2Q9Y2M2 353 aa6.99□□□□□ -1.29
PMS1-210ENST00000424307 C7P10643 843 aa6.98□□□□□ -1.29
PMS1-210ENST00000424307 ZRANB1Q9UGI0 708 aa6.96□□□□□ -1.29
PMS1-210ENST00000424307 PELP1Q8IZL8 1130 aaKnown RBP6.96□□□□□ -1.3
PMS1-210ENST00000424307 SLC39A7Q92504 469 aa6.96□□□□□ -1.3
PMS1-210ENST00000424307 METRNQ9UJH8 293 aa6.94□□□□□ -1.3
PMS1-210ENST00000424307 FBLN2P98095 1184 aa6.92□□□□□ -1.3
PMS1-210ENST00000424307 ZNF692Q9BU19 519 aaPredicted RBP6.91□□□□□ -1.3
PMS1-210ENST00000424307 ASTLQ6HA08 431 aaPredicted RBP6.88□□□□□ -1.31
PMS1-210ENST00000424307 ATMINO43313 823 aaPredicted RBP6.82□□□□□ -1.32
PMS1-210ENST00000424307 KCNA4P22459 653 aa6.81□□□□□ -1.32
PMS1-210ENST00000424307 ST18O60284 1047 aa6.77□□□□□ -1.33
PMS1-210ENST00000424307 PAK3O75914 559 aaPredicted RBP6.77□□□□□ -1.33
PMS1-210ENST00000424307 PABPN1Q86U42 306 aaKnown RBP eCLIP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 1244.6 ms