RNA–Protein interactions for RNA: ENST00000422242.1

RAB5A-203, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB5A, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-203ENST00000422242 ZBTB47Q9UFB7 747 aaPredicted RBP20.17■□□□□ 0.82
RAB5A-203ENST00000422242 UNC13AQ9UPW8 1703 aa20.04■□□□□ 0.8
RAB5A-203ENST00000422242 TRIM41Q8WV44 630 aa20.02■□□□□ 0.79
RAB5A-203ENST00000422242 SCRIBQ14160 1630 aa20.01■□□□□ 0.79
RAB5A-203ENST00000422242 POTEDQ86YR6 584 aa19.97■□□□□ 0.79
RAB5A-203ENST00000422242 HS6ST3Q8IZP7 471 aa19.96■□□□□ 0.79
RAB5A-203ENST00000422242 RNF25Q96BH1 459 aaPredicted RBP19.89■□□□□ 0.77
RAB5A-203ENST00000422242 GSE1Q14687 1217 aa19.86■□□□□ 0.77
RAB5A-203ENST00000422242 DNAJC5Q9H3Z4 198 aa19.85■□□□□ 0.77
RAB5A-203ENST00000422242 SHROOM4Q9ULL8 1493 aa19.78■□□□□ 0.76
RAB5A-203ENST00000422242 NUBP1P53384 320 aa19.78■□□□□ 0.76
RAB5A-203ENST00000422242 NBR1Q14596 966 aa19.78■□□□□ 0.76
RAB5A-203ENST00000422242 BICRAQ9NZM4 1560 aa19.77■□□□□ 0.76
RAB5A-203ENST00000422242 DCAF8Q5TAQ9 597 aa19.74■□□□□ 0.75
RAB5A-203ENST00000422242 NKX1-1Q15270 411 aaPredicted RBP19.73■□□□□ 0.75
RAB5A-203ENST00000422242 RIOK3O14730 519 aaKnown RBP19.71■□□□□ 0.75
RAB5A-203ENST00000422242 GTPBP6O43824 516 aaPredicted RBP19.63■□□□□ 0.73
RAB5A-203ENST00000422242 STK25O00506 426 aa19.59■□□□□ 0.73
RAB5A-203ENST00000422242 SPDYE1Q8NFV5 336 aaPredicted RBP19.59■□□□□ 0.73
RAB5A-203ENST00000422242 FAM212AQ96EL1 285 aa19.58■□□□□ 0.72
RAB5A-203ENST00000422242 CACNB1Q02641 598 aaPredicted RBP19.55■□□□□ 0.72
RAB5A-203ENST00000422242 VGFO15240 615 aaPredicted RBP19.54■□□□□ 0.72
RAB5A-203ENST00000422242 CREBZFQ9NS37 354 aa19.53■□□□□ 0.72
RAB5A-203ENST00000422242 CLEC11AQ9Y240 323 aa19.51■□□□□ 0.71
RAB5A-203ENST00000422242 MNX1P50219 401 aaPredicted RBP19.49■□□□□ 0.71
RAB5A-203ENST00000422242 PRR29P0C7W0 189 aa19.47■□□□□ 0.71
RAB5A-203ENST00000422242 CHRM1P11229 460 aaPredicted RBP19.46■□□□□ 0.71
RAB5A-203ENST00000422242 RASEFQ8IZ41 740 aa19.44■□□□□ 0.7
RAB5A-203ENST00000422242 AKT1S1Q96B36 256 aa19.43■□□□□ 0.7
RAB5A-203ENST00000422242 BCL11BQ9C0K0 894 aaPredicted RBP19.42■□□□□ 0.7
RAB5A-203ENST00000422242 STK24Q9Y6E0 443 aa19.42■□□□□ 0.7
RAB5A-203ENST00000422242 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.4■□□□□ 0.7
RAB5A-203ENST00000422242 ZFP91Q96JP5 570 aaPredicted RBP19.4■□□□□ 0.7
RAB5A-203ENST00000422242 SGIP1Q9BQI5 828 aa19.37■□□□□ 0.69
RAB5A-203ENST00000422242 RBM42Q9BTD8 480 aaKnown RBP19.36■□□□□ 0.69
RAB5A-203ENST00000422242 PYGBP11216 843 aa19.33■□□□□ 0.68
RAB5A-203ENST00000422242 RYDENQ9NUL5 291 aaKnown RBP19.31■□□□□ 0.68
RAB5A-203ENST00000422242 REM2Q8IYK8 340 aaPredicted RBP19.29■□□□□ 0.68
RAB5A-203ENST00000422242 BAZ1AQ9NRL2 1556 aaPredicted RBP19.28■□□□□ 0.68
RAB5A-203ENST00000422242 CECR2Q9BXF3 1484 aa19.27■□□□□ 0.67
RAB5A-203ENST00000422242 SMARCA4P51532 1647 aa19.23■□□□□ 0.67
RAB5A-203ENST00000422242 EIF4G1Q04637 1599 aaKnown RBP19.21■□□□□ 0.67
RAB5A-203ENST00000422242 MROH2BQ7Z745 1585 aa19.15■□□□□ 0.66
RAB5A-203ENST00000422242 P3H3Q8IVL6 736 aa19.11■□□□□ 0.65
RAB5A-203ENST00000422242 RSF1Q96T23 1441 aaPredicted RBP19.09■□□□□ 0.65
RAB5A-203ENST00000422242 PEG3Q9GZU2 1588 aa19.08■□□□□ 0.64
RAB5A-203ENST00000422242 PITPNM1O00562 1244 aa19.07■□□□□ 0.64
RAB5A-203ENST00000422242 CADPS2Q86UW7 1296 aa19.05■□□□□ 0.64
RAB5A-203ENST00000422242 TIMELESSQ9UNS1 1208 aa19.05■□□□□ 0.64
RAB5A-203ENST00000422242 TULP1O00294 542 aaPredicted RBP19.04■□□□□ 0.64
RAB5A-203ENST00000422242 GTF3C3Q9Y5Q9 886 aa19.03■□□□□ 0.64
RAB5A-203ENST00000422242 SMARCA2P51531 1590 aa19.01■□□□□ 0.63
RAB5A-203ENST00000422242 TSPYL2Q9H2G4 693 aaPredicted RBP19.01■□□□□ 0.63
RAB5A-203ENST00000422242 WDR70Q9NW82 654 aa19.01■□□□□ 0.63
RAB5A-203ENST00000422242 CC2D2AQ9P2K1 1620 aa19.01■□□□□ 0.63
RAB5A-203ENST00000422242 ZNF467Q7Z7K2 595 aaPredicted RBP19■□□□□ 0.63
RAB5A-203ENST00000422242 WIZO95785 1651 aa19■□□□□ 0.63
RAB5A-203ENST00000422242 KCNV2Q8TDN2 545 aa19■□□□□ 0.63
RAB5A-203ENST00000422242 ATAD2BQ9ULI0 1458 aa18.96■□□□□ 0.63
RAB5A-203ENST00000422242 PDAP1Q13442 181 aaKnown RBP18.95■□□□□ 0.62
RAB5A-203ENST00000422242 CHADLQ6NUI6 762 aa18.92■□□□□ 0.62
RAB5A-203ENST00000422242 PCDHB8Q9UN66 801 aa18.92■□□□□ 0.62
RAB5A-203ENST00000422242 PCDHB13Q9Y5F0 798 aa18.92■□□□□ 0.62
RAB5A-203ENST00000422242 NCAPD3P42695 1498 aa18.9■□□□□ 0.62
RAB5A-203ENST00000422242 HMGXB3Q12766 1538 aa18.9■□□□□ 0.62
RAB5A-203ENST00000422242 TMEM132AQ24JP5 1023 aa18.89■□□□□ 0.61
RAB5A-203ENST00000422242 LMOD2Q6P5Q4 547 aa18.89■□□□□ 0.61
RAB5A-203ENST00000422242 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.88■□□□□ 0.61
RAB5A-203ENST00000422242 SUPT5HO00267 1087 aaKnown RBP18.85■□□□□ 0.61
RAB5A-203ENST00000422242 MFRPQ9BY79 579 aa18.85■□□□□ 0.61
RAB5A-203ENST00000422242 TOP2AP11388 1531 aaKnown RBP18.84■□□□□ 0.61
RAB5A-203ENST00000422242 BAZ1BQ9UIG0 1483 aaKnown RBP18.83■□□□□ 0.61
RAB5A-203ENST00000422242 PSEN1P49768 467 aa18.83■□□□□ 0.6
RAB5A-203ENST00000422242 FARP1Q9Y4F1 1045 aaPredicted RBP18.82■□□□□ 0.6
RAB5A-203ENST00000422242 ZNF579Q8NAF0 562 aaKnown RBP18.75■□□□□ 0.59
RAB5A-203ENST00000422242 CCDC61Q9Y6R9 512 aa18.75■□□□□ 0.59
RAB5A-203ENST00000422242 PPP1R37O75864 691 aa18.73■□□□□ 0.59
RAB5A-203ENST00000422242 ERICH6Q7L0X2 663 aa18.7■□□□□ 0.58
RAB5A-203ENST00000422242 ARHGEF1Q92888 912 aaKnown RBP18.68■□□□□ 0.58
RAB5A-203ENST00000422242 E2F4Q16254 413 aa18.65■□□□□ 0.58
RAB5A-203ENST00000422242 EFCAB3Q8N7B9 438 aa18.65■□□□□ 0.58
RAB5A-203ENST00000422242 FBXO22Q8NEZ5 403 aa18.64■□□□□ 0.57
RAB5A-203ENST00000422242 IFNL1Q8IU54 200 aa18.63■□□□□ 0.57
RAB5A-203ENST00000422242 NLRP6P59044 892 aa18.62■□□□□ 0.57
RAB5A-203ENST00000422242 CABP2Q9NPB3 220 aa18.61■□□□□ 0.57
RAB5A-203ENST00000422242 PHF8Q9UPP1 1060 aa18.6■□□□□ 0.57
RAB5A-203ENST00000422242 PRKAR2AP13861 404 aaKnown RBP18.59■□□□□ 0.57
RAB5A-203ENST00000422242 BRPF1P55201 1214 aaPredicted RBP18.59■□□□□ 0.57
RAB5A-203ENST00000422242 ZC3H15Q8WU90 426 aaKnown RBP18.59■□□□□ 0.57
RAB5A-203ENST00000422242 CCDC88BA6NC98 1476 aa18.57■□□□□ 0.56
RAB5A-203ENST00000422242 SEMA3EO15041 775 aa18.57■□□□□ 0.56
RAB5A-203ENST00000422242 SOX12O15370 315 aa18.57■□□□□ 0.56
RAB5A-203ENST00000422242 MAP3K13O43283 966 aa18.54■□□□□ 0.56
RAB5A-203ENST00000422242 TESPA1A2RU30 521 aaPredicted RBP18.53■□□□□ 0.56
RAB5A-203ENST00000422242 PAK3O75914 559 aaPredicted RBP18.52■□□□□ 0.56
RAB5A-203ENST00000422242 C14orf37Q86TY3 774 aa18.51■□□□□ 0.55
RAB5A-203ENST00000422242 KIF12Q96FN5 646 aa18.49■□□□□ 0.55
RAB5A-203ENST00000422242 NCKAP5LQ9HCH0 1330 aa18.47■□□□□ 0.55
RAB5A-203ENST00000422242 SLC24A3Q9HC58 644 aa18.46■□□□□ 0.55
RAB5A-203ENST00000422242 NEUROD2Q15784 382 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms