RNA–Protein interactions for RNA: ENST00000421851.1

RC3H1-IT1-201, RC3H1 intronic transcript 1, humanhuman

TSL 5 BASIC

Gene RC3H1-IT1, Length 448 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-IT1-201ENST00000421851 OSCARQ8IYS5 282 aa13.38□□□□□ -0.27
RC3H1-IT1-201ENST00000421851 SSUH2Q9Y2M2 353 aa13.36□□□□□ -0.27
RC3H1-IT1-201ENST00000421851 LHX8Q68G74 356 aa13.35□□□□□ -0.27
RC3H1-IT1-201ENST00000421851 ZBTB47Q9UFB7 747 aaPredicted RBP13.33□□□□□ -0.28
RC3H1-IT1-201ENST00000421851 NBR1Q14596 966 aa13.24□□□□□ -0.29
RC3H1-IT1-201ENST00000421851 REM2Q8IYK8 340 aaPredicted RBP13.24□□□□□ -0.29
RC3H1-IT1-201ENST00000421851 TRIM41Q8WV44 630 aa13.23□□□□□ -0.29
RC3H1-IT1-201ENST00000421851 FXR2P51116 673 aaKnown RBP eCLIP13.21□□□□□ -0.29
RC3H1-IT1-201ENST00000421851 HS6ST3Q8IZP7 471 aa13.16□□□□□ -0.3
RC3H1-IT1-201ENST00000421851 EVX2Q03828 476 aa13.14□□□□□ -0.31
RC3H1-IT1-201ENST00000421851 GSE1Q14687 1217 aa13.12□□□□□ -0.31
RC3H1-IT1-201ENST00000421851 PITPNM1O00562 1244 aa13.1□□□□□ -0.31
RC3H1-IT1-201ENST00000421851 DNAJC5Q9H3Z4 198 aa13.09□□□□□ -0.31
RC3H1-IT1-201ENST00000421851 DCAF8Q5TAQ9 597 aa13.06□□□□□ -0.32
RC3H1-IT1-201ENST00000421851 RNF25Q96BH1 459 aaPredicted RBP13.03□□□□□ -0.32
RC3H1-IT1-201ENST00000421851 RIOK3O14730 519 aaKnown RBP13□□□□□ -0.33
RC3H1-IT1-201ENST00000421851 NUBP1P53384 320 aa12.97□□□□□ -0.33
RC3H1-IT1-201ENST00000421851 NKX1-1Q15270 411 aaPredicted RBP12.97□□□□□ -0.33
RC3H1-IT1-201ENST00000421851 STK25O00506 426 aa12.95□□□□□ -0.34
RC3H1-IT1-201ENST00000421851 GTPBP6O43824 516 aaPredicted RBP12.95□□□□□ -0.34
RC3H1-IT1-201ENST00000421851 VGFO15240 615 aaPredicted RBP12.9□□□□□ -0.34
RC3H1-IT1-201ENST00000421851 FAM212AQ96EL1 285 aa12.9□□□□□ -0.34
RC3H1-IT1-201ENST00000421851 GABBR2O75899 941 aa12.88□□□□□ -0.35
RC3H1-IT1-201ENST00000421851 STK24Q9Y6E0 443 aa12.84□□□□□ -0.35
RC3H1-IT1-201ENST00000421851 C19orf67A6NJJ6 358 aa12.83□□□□□ -0.36
RC3H1-IT1-201ENST00000421851 SPDYE1Q8NFV5 336 aaPredicted RBP12.83□□□□□ -0.36
RC3H1-IT1-201ENST00000421851 RYDENQ9NUL5 291 aaKnown RBP12.82□□□□□ -0.36
RC3H1-IT1-201ENST00000421851 CLEC11AQ9Y240 323 aa12.82□□□□□ -0.36
RC3H1-IT1-201ENST00000421851 TULP1O00294 542 aaPredicted RBP12.81□□□□□ -0.36
RC3H1-IT1-201ENST00000421851 GTF3C3Q9Y5Q9 886 aa12.81□□□□□ -0.36
RC3H1-IT1-201ENST00000421851 PRR29P0C7W0 189 aa12.8□□□□□ -0.36
RC3H1-IT1-201ENST00000421851 BCL11BQ9C0K0 894 aaPredicted RBP12.8□□□□□ -0.36
RC3H1-IT1-201ENST00000421851 CHRM1P11229 460 aaPredicted RBP12.79□□□□□ -0.36
RC3H1-IT1-201ENST00000421851 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.78□□□□□ -0.36
RC3H1-IT1-201ENST00000421851 ZFP91Q96JP5 570 aaPredicted RBP12.78□□□□□ -0.36
RC3H1-IT1-201ENST00000421851 TIMELESSQ9UNS1 1208 aa12.77□□□□□ -0.37
RC3H1-IT1-201ENST00000421851 PRKAR2AP13861 404 aaKnown RBP12.76□□□□□ -0.37
RC3H1-IT1-201ENST00000421851 CREBZFQ9NS37 354 aa12.76□□□□□ -0.37
RC3H1-IT1-201ENST00000421851 SGIP1Q9BQI5 828 aa12.75□□□□□ -0.37
RC3H1-IT1-201ENST00000421851 RASEFQ8IZ41 740 aa12.73□□□□□ -0.37
RC3H1-IT1-201ENST00000421851 PYGBP11216 843 aa12.72□□□□□ -0.37
RC3H1-IT1-201ENST00000421851 P3H3Q8IVL6 736 aa12.7□□□□□ -0.38
RC3H1-IT1-201ENST00000421851 MNX1P50219 401 aaPredicted RBP12.69□□□□□ -0.38
RC3H1-IT1-201ENST00000421851 WDR70Q9NW82 654 aa12.69□□□□□ -0.38
RC3H1-IT1-201ENST00000421851 POTEMA6NI47 508 aa12.68□□□□□ -0.38
RC3H1-IT1-201ENST00000421851 ERICH6Q7L0X2 663 aa12.67□□□□□ -0.38
RC3H1-IT1-201ENST00000421851 TMEM132AQ24JP5 1023 aa12.65□□□□□ -0.38
RC3H1-IT1-201ENST00000421851 POTEGQ6S5H5 508 aa12.57□□□□□ -0.4
RC3H1-IT1-201ENST00000421851 LMOD2Q6P5Q4 547 aa12.56□□□□□ -0.4
RC3H1-IT1-201ENST00000421851 KCNV2Q8TDN2 545 aa12.54□□□□□ -0.4
RC3H1-IT1-201ENST00000421851 POTEIP0CG38 1075 aa12.53□□□□□ -0.4
RC3H1-IT1-201ENST00000421851 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.53□□□□□ -0.4
RC3H1-IT1-201ENST00000421851 CADPS2Q86UW7 1296 aa12.53□□□□□ -0.4
RC3H1-IT1-201ENST00000421851 ZNF467Q7Z7K2 595 aaPredicted RBP12.52□□□□□ -0.41
RC3H1-IT1-201ENST00000421851 CLCN6P51797 869 aa12.5□□□□□ -0.41
RC3H1-IT1-201ENST00000421851 TSPYL2Q9H2G4 693 aaPredicted RBP12.5□□□□□ -0.41
RC3H1-IT1-201ENST00000421851 C14orf37Q86TY3 774 aa12.49□□□□□ -0.41
RC3H1-IT1-201ENST00000421851 PDAP1Q13442 181 aaKnown RBP12.47□□□□□ -0.41
RC3H1-IT1-201ENST00000421851 PCDH10Q9P2E7 1040 aa12.46□□□□□ -0.41
RC3H1-IT1-201ENST00000421851 ARXQ96QS3 562 aa12.45□□□□□ -0.42
RC3H1-IT1-201ENST00000421851 PCDHB8Q9UN66 801 aa12.43□□□□□ -0.42
RC3H1-IT1-201ENST00000421851 PCDHB13Q9Y5F0 798 aa12.43□□□□□ -0.42
RC3H1-IT1-201ENST00000421851 DCBLD2Q96PD2 775 aa12.39□□□□□ -0.43
RC3H1-IT1-201ENST00000421851 PSEN1P49768 467 aa12.38□□□□□ -0.43
RC3H1-IT1-201ENST00000421851 ARHGEF1Q92888 912 aaKnown RBP12.38□□□□□ -0.43
RC3H1-IT1-201ENST00000421851 MFRPQ9BY79 579 aa12.37□□□□□ -0.43
RC3H1-IT1-201ENST00000421851 BRPF1P55201 1214 aaPredicted RBP12.36□□□□□ -0.43
RC3H1-IT1-201ENST00000421851 CHADLQ6NUI6 762 aa12.36□□□□□ -0.43
RC3H1-IT1-201ENST00000421851 E2F4Q16254 413 aa12.35□□□□□ -0.43
RC3H1-IT1-201ENST00000421851 ZC3H15Q8WU90 426 aaKnown RBP12.34□□□□□ -0.43
RC3H1-IT1-201ENST00000421851 NEUROD2Q15784 382 aa12.33□□□□□ -0.44
RC3H1-IT1-201ENST00000421851 CD44P16070 742 aaKnown RBP12.31□□□□□ -0.44
RC3H1-IT1-201ENST00000421851 ZNF579Q8NAF0 562 aaKnown RBP12.31□□□□□ -0.44
RC3H1-IT1-201ENST00000421851 OTUD5Q96G74 571 aa12.31□□□□□ -0.44
RC3H1-IT1-201ENST00000421851 PPP1R37O75864 691 aa12.3□□□□□ -0.44
RC3H1-IT1-201ENST00000421851 FARP1Q9Y4F1 1045 aaPredicted RBP12.3□□□□□ -0.44
RC3H1-IT1-201ENST00000421851 NLRP6P59044 892 aa12.29□□□□□ -0.44
RC3H1-IT1-201ENST00000421851 SEMA3EO15041 775 aa12.28□□□□□ -0.44
RC3H1-IT1-201ENST00000421851 SLC24A3Q9HC58 644 aa12.28□□□□□ -0.44
RC3H1-IT1-201ENST00000421851 EFCAB3Q8N7B9 438 aa12.26□□□□□ -0.45
RC3H1-IT1-201ENST00000421851 TESPA1A2RU30 521 aaPredicted RBP12.25□□□□□ -0.45
RC3H1-IT1-201ENST00000421851 HOMEZQ8IX15 550 aa12.25□□□□□ -0.45
RC3H1-IT1-201ENST00000421851 CABP2Q9NPB3 220 aa12.25□□□□□ -0.45
RC3H1-IT1-201ENST00000421851 SOX12O15370 315 aa12.24□□□□□ -0.45
RC3H1-IT1-201ENST00000421851 CCDC61Q9Y6R9 512 aa12.24□□□□□ -0.45
RC3H1-IT1-201ENST00000421851 SMYD5Q6GMV2 418 aa12.23□□□□□ -0.45
RC3H1-IT1-201ENST00000421851 PHF8Q9UPP1 1060 aa12.23□□□□□ -0.45
RC3H1-IT1-201ENST00000421851 FBXO22Q8NEZ5 403 aa12.21□□□□□ -0.45
RC3H1-IT1-201ENST00000421851 PAK3O75914 559 aaPredicted RBP12.2□□□□□ -0.46
RC3H1-IT1-201ENST00000421851 LARP6Q9BRS8 491 aaKnown RBP12.2□□□□□ -0.46
RC3H1-IT1-201ENST00000421851 PDE4AP27815 886 aa12.19□□□□□ -0.46
RC3H1-IT1-201ENST00000421851 IFNL1Q8IU54 200 aa12.19□□□□□ -0.46
RC3H1-IT1-201ENST00000421851 DAXXQ9UER7 740 aaPredicted RBP12.18□□□□□ -0.46
RC3H1-IT1-201ENST00000421851 SUPT5HO00267 1087 aaKnown RBP12.14□□□□□ -0.47
RC3H1-IT1-201ENST00000421851 MAP3K13O43283 966 aa12.14□□□□□ -0.47
RC3H1-IT1-201ENST00000421851 ZMYND10O75800 440 aa12.14□□□□□ -0.47
RC3H1-IT1-201ENST00000421851 NCKAP5LQ9HCH0 1330 aa12.12□□□□□ -0.47
RC3H1-IT1-201ENST00000421851 KIF12Q96FN5 646 aa12.1□□□□□ -0.47
RC3H1-IT1-201ENST00000421851 DDX27Q96GQ7 796 aaKnown RBP12.09□□□□□ -0.47
RC3H1-IT1-201ENST00000421851 POTEB2H3BUK9 544 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms