RNA–Protein interactions for RNA: ENST00000420912.1

AC004947.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC004947.1, Length 2,781 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004947.1-201ENST00000420912 YTHDC1Q96MU7 727 aaKnown RBP12.1□□□□□ -0.47
AC004947.1-201ENST00000420912 RRBP1Q9P2E9 1410 aaKnown RBP12.09□□□□□ -0.47
AC004947.1-201ENST00000420912 NEUROD1Q13562 356 aa12.09□□□□□ -0.47
AC004947.1-201ENST00000420912 PDS5BQ9NTI5 1447 aa12.07□□□□□ -0.48
AC004947.1-201ENST00000420912 PHLDB1Q86UU1 1377 aa12.07□□□□□ -0.48
AC004947.1-201ENST00000420912 LAMC3Q9Y6N6 1575 aa12.06□□□□□ -0.48
AC004947.1-201ENST00000420912 MIER1Q8N108 512 aa12.06□□□□□ -0.48
AC004947.1-201ENST00000420912 TIAM1Q13009 1591 aa12.05□□□□□ -0.48
AC004947.1-201ENST00000420912 LRRC9Q6ZRR7 1453 aa12.05□□□□□ -0.48
AC004947.1-201ENST00000420912 FHAD1B1AJZ9 1412 aa12.04□□□□□ -0.48
AC004947.1-201ENST00000420912 GAPVD1Q14C86 1478 aa12.03□□□□□ -0.48
AC004947.1-201ENST00000420912 ACIN1Q9UKV3 1341 aaKnown RBP12.03□□□□□ -0.48
AC004947.1-201ENST00000420912 PCF11O94913 1555 aaKnown RBP12.02□□□□□ -0.48
AC004947.1-201ENST00000420912 ARID3CA6NKF2 412 aa12.02□□□□□ -0.48
AC004947.1-201ENST00000420912 RAB3GAP2Q9H2M9 1393 aa12.02□□□□□ -0.48
AC004947.1-201ENST00000420912 KIF21AQ7Z4S6 1674 aa12□□□□□ -0.49
AC004947.1-201ENST00000420912 AQRO60306 1485 aaKnown RBP eCLIP11.99□□□□□ -0.49
AC004947.1-201ENST00000420912 CENPBP07199 599 aaPredicted RBP11.97□□□□□ -0.49
AC004947.1-201ENST00000420912 SIN3AQ96ST3 1273 aa11.97□□□□□ -0.49
AC004947.1-201ENST00000420912 CLSPNQ9HAW4 1339 aa11.97□□□□□ -0.49
AC004947.1-201ENST00000420912 CUL7Q14999 1698 aa11.96□□□□□ -0.49
AC004947.1-201ENST00000420912 GTF3C3Q9Y5Q9 886 aa11.96□□□□□ -0.5
AC004947.1-201ENST00000420912 MTUS2Q5JR59 1369 aa11.95□□□□□ -0.5
AC004947.1-201ENST00000420912 CASKIN1Q8WXD9 1431 aa11.95□□□□□ -0.5
AC004947.1-201ENST00000420912 MAP3K1Q13233 1512 aa11.95□□□□□ -0.5
AC004947.1-201ENST00000420912 SETD5Q9C0A6 1442 aa11.94□□□□□ -0.5
AC004947.1-201ENST00000420912 FMN1Q68DA7 1419 aa11.93□□□□□ -0.5
AC004947.1-201ENST00000420912 ABCA5Q8WWZ7 1642 aa11.93□□□□□ -0.5
AC004947.1-201ENST00000420912 FYCO1Q9BQS8 1478 aa11.93□□□□□ -0.5
AC004947.1-201ENST00000420912 CTTNBP2Q8WZ74 1663 aa11.93□□□□□ -0.5
AC004947.1-201ENST00000420912 WDR97A6NE52 1622 aa11.93□□□□□ -0.5
AC004947.1-201ENST00000420912 EFCAB5A4FU69 1503 aa11.92□□□□□ -0.5
AC004947.1-201ENST00000420912 TARBP1Q13395 1621 aaKnown RBP11.89□□□□□ -0.51
AC004947.1-201ENST00000420912 CFAP43Q8NDM7 1665 aa11.89□□□□□ -0.51
AC004947.1-201ENST00000420912 SNAPC4Q5SXM2 1469 aa11.89□□□□□ -0.51
AC004947.1-201ENST00000420912 HIRIP3Q9BW71 556 aaPredicted RBP11.89□□□□□ -0.51
AC004947.1-201ENST00000420912 CHIC2Q9UKJ5 165 aa11.89□□□□□ -0.51
AC004947.1-201ENST00000420912 ZNF608Q9ULD9 1512 aaPredicted RBP11.89□□□□□ -0.51
AC004947.1-201ENST00000420912 FBLN2P98095 1184 aa11.88□□□□□ -0.51
AC004947.1-201ENST00000420912 MAPKBP1O60336 1514 aa11.88□□□□□ -0.51
AC004947.1-201ENST00000420912 FGD6Q6ZV73 1430 aa11.86□□□□□ -0.51
AC004947.1-201ENST00000420912 MRC2Q9UBG0 1479 aa11.86□□□□□ -0.51
AC004947.1-201ENST00000420912 RRP7BPQ9NSQ0 103 aa11.84□□□□□ -0.51
AC004947.1-201ENST00000420912 PTPRKQ15262 1439 aa11.84□□□□□ -0.51
AC004947.1-201ENST00000420912 PELP1Q8IZL8 1130 aaKnown RBP11.84□□□□□ -0.51
AC004947.1-201ENST00000420912 SAMD9Q5K651 1589 aa11.84□□□□□ -0.51
AC004947.1-201ENST00000420912 NCOA2Q15596 1464 aa11.83□□□□□ -0.52
AC004947.1-201ENST00000420912 LRRIQ1Q96JM4 1722 aa11.82□□□□□ -0.52
AC004947.1-201ENST00000420912 GRIN2BQ13224 1484 aa11.82□□□□□ -0.52
AC004947.1-201ENST00000420912 ERCC6Q03468 1493 aa11.81□□□□□ -0.52
AC004947.1-201ENST00000420912 PBRM1Q86U86 1689 aa11.8□□□□□ -0.52
AC004947.1-201ENST00000420912 MAGI3Q5TCQ9 1506 aa11.79□□□□□ -0.52
AC004947.1-201ENST00000420912 MYOM3Q5VTT5 1437 aa11.79□□□□□ -0.52
AC004947.1-201ENST00000420912 DDX10Q13206 875 aaKnown RBP11.79□□□□□ -0.52
AC004947.1-201ENST00000420912 CHMP7Q8WUX9 453 aaPredicted RBP11.79□□□□□ -0.52
AC004947.1-201ENST00000420912 CDK13Q14004 1512 aaKnown RBP11.79□□□□□ -0.52
AC004947.1-201ENST00000420912 IQGAP2Q13576 1575 aa11.78□□□□□ -0.52
AC004947.1-201ENST00000420912 TRIM52Q96A61 297 aa11.78□□□□□ -0.52
AC004947.1-201ENST00000420912 KCNH8Q96L42 1107 aa11.78□□□□□ -0.52
AC004947.1-201ENST00000420912 ADAMTS12P58397 1594 aa11.77□□□□□ -0.53
AC004947.1-201ENST00000420912 CCDC18Q5T9S5 1454 aa11.76□□□□□ -0.53
AC004947.1-201ENST00000420912 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.76□□□□□ -0.53
AC004947.1-201ENST00000420912 IFT140Q96RY7 1462 aa11.76□□□□□ -0.53
AC004947.1-201ENST00000420912 PPP1R15AO75807 674 aaPredicted RBP11.75□□□□□ -0.53
AC004947.1-201ENST00000420912 EPRSP07814 1512 aaKnown RBP11.75□□□□□ -0.53
AC004947.1-201ENST00000420912 ZNF644Q9H582 1327 aaPredicted RBP11.74□□□□□ -0.53
AC004947.1-201ENST00000420912 FOXD1Q16676 465 aa11.74□□□□□ -0.53
AC004947.1-201ENST00000420912 NAIPQ13075 1403 aa11.74□□□□□ -0.53
AC004947.1-201ENST00000420912 SUPT6HQ7KZ85 1726 aaKnown RBP11.74□□□□□ -0.53
AC004947.1-201ENST00000420912 TONSLQ96HA7 1378 aa11.73□□□□□ -0.53
AC004947.1-201ENST00000420912 HFM1A2PYH4 1435 aa11.73□□□□□ -0.53
AC004947.1-201ENST00000420912 EHBP1L1Q8N3D4 1523 aa11.73□□□□□ -0.53
AC004947.1-201ENST00000420912 WDR62O43379 1518 aa11.72□□□□□ -0.53
AC004947.1-201ENST00000420912 PTPN23Q9H3S7 1636 aa11.71□□□□□ -0.53
AC004947.1-201ENST00000420912 UGGT2Q9NYU1 1516 aa11.71□□□□□ -0.53
AC004947.1-201ENST00000420912 THOC2Q8NI27 1593 aaKnown RBP11.71□□□□□ -0.54
AC004947.1-201ENST00000420912 ZNF777Q9ULD5 760 aaPredicted RBP11.71□□□□□ -0.54
AC004947.1-201ENST00000420912 UACAQ9BZF9 1416 aa11.7□□□□□ -0.54
AC004947.1-201ENST00000420912 HECW1Q76N89 1606 aa11.7□□□□□ -0.54
AC004947.1-201ENST00000420912 GRIN2AQ12879 1464 aa11.7□□□□□ -0.54
AC004947.1-201ENST00000420912 EIF4G3O43432 1585 aaKnown RBP11.69□□□□□ -0.54
AC004947.1-201ENST00000420912 DISP1Q96F81 1524 aa11.69□□□□□ -0.54
AC004947.1-201ENST00000420912 KIAA0586Q9BVV6 1533 aa11.69□□□□□ -0.54
AC004947.1-201ENST00000420912 JPH4Q96JJ6 628 aa11.68□□□□□ -0.54
AC004947.1-201ENST00000420912 TIMELESSQ9UNS1 1208 aa11.67□□□□□ -0.54
AC004947.1-201ENST00000420912 CDK11AQ9UQ88 783 aaPredicted RBP11.66□□□□□ -0.54
AC004947.1-201ENST00000420912 ARHGEF11O15085 1522 aa11.66□□□□□ -0.54
AC004947.1-201ENST00000420912 PLB1Q6P1J6 1458 aa11.66□□□□□ -0.54
AC004947.1-201ENST00000420912 PRG4Q92954 1404 aaPredicted RBP11.65□□□□□ -0.54
AC004947.1-201ENST00000420912 NUP153P49790 1475 aaKnown RBP11.65□□□□□ -0.54
AC004947.1-201ENST00000420912 MPHOSPH9Q99550 1183 aa11.65□□□□□ -0.54
AC004947.1-201ENST00000420912 KIAA0556O60303 1618 aa11.64□□□□□ -0.55
AC004947.1-201ENST00000420912 KDM6BO15054 1643 aa11.64□□□□□ -0.55
AC004947.1-201ENST00000420912 PHF23Q9BUL5 403 aaPredicted RBP11.64□□□□□ -0.55
AC004947.1-201ENST00000420912 CFDP1Q9UEE9 299 aaPredicted RBP11.64□□□□□ -0.55
AC004947.1-201ENST00000420912 CEP170Q5SW79 1584 aa11.62□□□□□ -0.55
AC004947.1-201ENST00000420912 SYNJ2O15056 1496 aa11.61□□□□□ -0.55
AC004947.1-201ENST00000420912 MIA2Q96PC5 1412 aa11.61□□□□□ -0.55
AC004947.1-201ENST00000420912 TCOF1Q13428 1488 aaKnown RBP11.61□□□□□ -0.55
AC004947.1-201ENST00000420912 SLC4A1APQ9BWU0 796 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms