RNA–Protein interactions for RNA: ENST00000420522.1

LINC01646-201, Transcript of long intergenic non-protein coding RNA 1646, humanhuman

TSL 3 BASIC

Gene LINC01646, Length 682 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01646-201ENST00000420522 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.46□□□□□ -0.73
LINC01646-201ENST00000420522 CHGAP10645 457 aaKnown RBP10.45□□□□□ -0.74
LINC01646-201ENST00000420522 FXR2P51116 673 aaKnown RBP eCLIP10.44□□□□□ -0.74
LINC01646-201ENST00000420522 FARP1Q9Y4F1 1045 aaPredicted RBP10.44□□□□□ -0.74
LINC01646-201ENST00000420522 RIOK3O14730 519 aaKnown RBP10.42□□□□□ -0.74
LINC01646-201ENST00000420522 PRKAR2AP13861 404 aaKnown RBP10.42□□□□□ -0.74
LINC01646-201ENST00000420522 HAP1P54257 671 aaPredicted RBP10.41□□□□□ -0.74
LINC01646-201ENST00000420522 HS6ST3Q8IZP7 471 aa10.4□□□□□ -0.74
LINC01646-201ENST00000420522 CHRDL2Q6WN34 429 aa10.39□□□□□ -0.75
LINC01646-201ENST00000420522 TAOK2Q9UL54 1235 aa10.39□□□□□ -0.75
LINC01646-201ENST00000420522 PAXIP1Q6ZW49 1069 aaPredicted RBP10.38□□□□□ -0.75
LINC01646-201ENST00000420522 PYGBP11216 843 aa10.37□□□□□ -0.75
LINC01646-201ENST00000420522 VGFO15240 615 aaPredicted RBP10.35□□□□□ -0.75
LINC01646-201ENST00000420522 SPRYD3Q8NCJ5 442 aa10.35□□□□□ -0.75
LINC01646-201ENST00000420522 CFAP44Q96MT7 982 aa10.35□□□□□ -0.75
LINC01646-201ENST00000420522 DNAJC5Q9H3Z4 198 aa10.35□□□□□ -0.75
LINC01646-201ENST00000420522 PIP4P2Q8N4L2 257 aa10.34□□□□□ -0.75
LINC01646-201ENST00000420522 TSPYL2Q9H2G4 693 aaPredicted RBP10.34□□□□□ -0.75
LINC01646-201ENST00000420522 SGIP1Q9BQI5 828 aa10.31□□□□□ -0.76
LINC01646-201ENST00000420522 VSIG10Q8N0Z9 540 aa10.3□□□□□ -0.76
LINC01646-201ENST00000420522 STK25O00506 426 aa10.29□□□□□ -0.76
LINC01646-201ENST00000420522 CCDC61Q9Y6R9 512 aa10.28□□□□□ -0.76
LINC01646-201ENST00000420522 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.27□□□□□ -0.77
LINC01646-201ENST00000420522 ZFP91Q96JP5 570 aaPredicted RBP10.27□□□□□ -0.77
LINC01646-201ENST00000420522 NKX1-1Q15270 411 aaPredicted RBP10.25□□□□□ -0.77
LINC01646-201ENST00000420522 ZNF467Q7Z7K2 595 aaPredicted RBP10.24□□□□□ -0.77
LINC01646-201ENST00000420522 BCL11BQ9C0K0 894 aaPredicted RBP10.24□□□□□ -0.77
LINC01646-201ENST00000420522 PAK3O75914 559 aaPredicted RBP10.23□□□□□ -0.77
LINC01646-201ENST00000420522 TSHZ2Q9NRE2 1034 aa10.22□□□□□ -0.77
LINC01646-201ENST00000420522 STK24Q9Y6E0 443 aa10.22□□□□□ -0.77
LINC01646-201ENST00000420522 KDM2AQ9Y2K7 1162 aa10.21□□□□□ -0.77
LINC01646-201ENST00000420522 GTPBP6O43824 516 aaPredicted RBP10.19□□□□□ -0.78
LINC01646-201ENST00000420522 ZNF579Q8NAF0 562 aaKnown RBP10.19□□□□□ -0.78
LINC01646-201ENST00000420522 PCDHB8Q9UN66 801 aa10.19□□□□□ -0.78
LINC01646-201ENST00000420522 PCDHB13Q9Y5F0 798 aa10.19□□□□□ -0.78
LINC01646-201ENST00000420522 PDAP1Q13442 181 aaKnown RBP10.18□□□□□ -0.78
LINC01646-201ENST00000420522 KIF12Q96FN5 646 aa10.15□□□□□ -0.78
LINC01646-201ENST00000420522 MAP3K13O43283 966 aa10.14□□□□□ -0.79
LINC01646-201ENST00000420522 CD44P16070 742 aaKnown RBP10.14□□□□□ -0.79
LINC01646-201ENST00000420522 PSEN1P49768 467 aa10.13□□□□□ -0.79
LINC01646-201ENST00000420522 IFNL1Q8IU54 200 aa10.13□□□□□ -0.79
LINC01646-201ENST00000420522 RYDENQ9NUL5 291 aaKnown RBP10.13□□□□□ -0.79
LINC01646-201ENST00000420522 ZRANB1Q9UGI0 708 aa10.13□□□□□ -0.79
LINC01646-201ENST00000420522 PHF12Q96QT6 1004 aa10.07□□□□□ -0.8
LINC01646-201ENST00000420522 C19orf67A6NJJ6 358 aa10.06□□□□□ -0.8
LINC01646-201ENST00000420522 BCANQ96GW7 911 aa10.06□□□□□ -0.8
LINC01646-201ENST00000420522 MFRPQ9BY79 579 aa10.01□□□□□ -0.81
LINC01646-201ENST00000420522 CABP2Q9NPB3 220 aa9.99□□□□□ -0.81
LINC01646-201ENST00000420522 EFCAB3Q8N7B9 438 aa9.98□□□□□ -0.81
LINC01646-201ENST00000420522 SOX12O15370 315 aa9.97□□□□□ -0.81
LINC01646-201ENST00000420522 MS4A3Q96HJ5 214 aa9.96□□□□□ -0.82
LINC01646-201ENST00000420522 FBXO22Q8NEZ5 403 aa9.95□□□□□ -0.82
LINC01646-201ENST00000420522 NLRP6P59044 892 aa9.94□□□□□ -0.82
LINC01646-201ENST00000420522 TMEM106CQ9BVX2 250 aa9.93□□□□□ -0.82
LINC01646-201ENST00000420522 TRPC6Q9Y210 931 aa9.93□□□□□ -0.82
LINC01646-201ENST00000420522 PHF8Q9UPP1 1060 aa9.92□□□□□ -0.82
LINC01646-201ENST00000420522 HAX1O00165 279 aa9.9□□□□□ -0.82
LINC01646-201ENST00000420522 PPP1R37O75864 691 aa9.89□□□□□ -0.83
LINC01646-201ENST00000420522 CADPS2Q86UW7 1296 aa9.89□□□□□ -0.83
LINC01646-201ENST00000420522 TIE1P35590 1138 aa9.88□□□□□ -0.83
LINC01646-201ENST00000420522 GOLGA2Q08379 1002 aa9.88□□□□□ -0.83
LINC01646-201ENST00000420522 EVX2Q03828 476 aa9.87□□□□□ -0.83
LINC01646-201ENST00000420522 CLCN6P51797 869 aa9.86□□□□□ -0.83
LINC01646-201ENST00000420522 TTLL13PA6NNM8 815 aa9.85□□□□□ -0.83
LINC01646-201ENST00000420522 GALR2O43603 387 aaPredicted RBP9.85□□□□□ -0.83
LINC01646-201ENST00000420522 MS4A4AQ96JQ5 239 aa9.85□□□□□ -0.83
LINC01646-201ENST00000420522 MKRN3Q13064 507 aaKnown RBP9.83□□□□□ -0.84
LINC01646-201ENST00000420522 NBR1Q14596 966 aa9.83□□□□□ -0.84
LINC01646-201ENST00000420522 BMP2KQ9NSY1 1161 aaPredicted RBP9.83□□□□□ -0.84
LINC01646-201ENST00000420522 WDR70Q9NW82 654 aa9.81□□□□□ -0.84
LINC01646-201ENST00000420522 ILDR1Q86SU0 546 aaPredicted RBP9.8□□□□□ -0.84
LINC01646-201ENST00000420522 P3H3Q8IVL6 736 aa9.78□□□□□ -0.84
LINC01646-201ENST00000420522 TRIM35Q9UPQ4 493 aa9.77□□□□□ -0.85
LINC01646-201ENST00000420522 PRKCSHP14314 528 aaPredicted RBP9.75□□□□□ -0.85
LINC01646-201ENST00000420522 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.75□□□□□ -0.85
LINC01646-201ENST00000420522 ATN1P54259 1190 aaPredicted RBP9.73□□□□□ -0.85
LINC01646-201ENST00000420522 KCNV2Q8TDN2 545 aa9.73□□□□□ -0.85
LINC01646-201ENST00000420522 NCKAP5LQ9HCH0 1330 aa9.73□□□□□ -0.85
LINC01646-201ENST00000420522 ATMINO43313 823 aaPredicted RBP9.72□□□□□ -0.85
LINC01646-201ENST00000420522 ASTLQ6HA08 431 aaPredicted RBP9.72□□□□□ -0.85
LINC01646-201ENST00000420522 TPRNQ4KMQ1 711 aa9.71□□□□□ -0.86
LINC01646-201ENST00000420522 PDE4AP27815 886 aa9.7□□□□□ -0.86
LINC01646-201ENST00000420522 CRISPLD2Q9H0B8 497 aa9.7□□□□□ -0.86
LINC01646-201ENST00000420522 GABBR2O75899 941 aa9.68□□□□□ -0.86
LINC01646-201ENST00000420522 MFSD10Q14728 455 aa9.68□□□□□ -0.86
LINC01646-201ENST00000420522 E2F4Q16254 413 aa9.68□□□□□ -0.86
LINC01646-201ENST00000420522 POTEHQ6S545 545 aa9.68□□□□□ -0.86
LINC01646-201ENST00000420522 LARP6Q9BRS8 491 aaKnown RBP9.68□□□□□ -0.86
LINC01646-201ENST00000420522 IER5LQ5T953 404 aa9.67□□□□□ -0.86
LINC01646-201ENST00000420522 DPY19L2Q6NUT2 758 aa9.67□□□□□ -0.86
LINC01646-201ENST00000420522 PDCD7Q8N8D1 485 aaKnown RBP9.67□□□□□ -0.86
LINC01646-201ENST00000420522 IRX5P78411 483 aaPredicted RBP9.66□□□□□ -0.86
LINC01646-201ENST00000420522 ARHGEF1Q92888 912 aaKnown RBP9.66□□□□□ -0.86
LINC01646-201ENST00000420522 OCEL1Q9H607 264 aa9.65□□□□□ -0.86
LINC01646-201ENST00000420522 DDX27Q96GQ7 796 aaKnown RBP9.64□□□□□ -0.87
LINC01646-201ENST00000420522 MICALL2Q8IY33 904 aa9.62□□□□□ -0.87
LINC01646-201ENST00000420522 GPHNQ9NQX3 736 aaPredicted RBP9.61□□□□□ -0.87
LINC01646-201ENST00000420522 DCBLD2Q96PD2 775 aa9.6□□□□□ -0.87
LINC01646-201ENST00000420522 TMEM121BQ9BXQ6 578 aaPredicted RBP9.6□□□□□ -0.87
LINC01646-201ENST00000420522 CAMK2BQ13554 666 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms