RNA–Protein interactions for RNA: ENST00000419464.5

RAPH1-205, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RAPH1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-205ENST00000419464 LAMC3Q9Y6N6 1575 aa10.51□□□□□ -0.73
RAPH1-205ENST00000419464 HOMEZQ8IX15 550 aa10.51□□□□□ -0.73
RAPH1-205ENST00000419464 FBXO3Q9UK99 471 aa10.51□□□□□ -0.73
RAPH1-205ENST00000419464 NESP48681 1621 aa10.51□□□□□ -0.73
RAPH1-205ENST00000419464 PRDM2Q13029 1718 aa10.46□□□□□ -0.74
RAPH1-205ENST00000419464 HAP1P54257 671 aaPredicted RBP10.44□□□□□ -0.74
RAPH1-205ENST00000419464 PDS5BQ9NTI5 1447 aa10.43□□□□□ -0.74
RAPH1-205ENST00000419464 VASPP50552 380 aaPredicted RBP10.42□□□□□ -0.74
RAPH1-205ENST00000419464 ZNF692Q9BU19 519 aaPredicted RBP10.42□□□□□ -0.74
RAPH1-205ENST00000419464 FANCD2Q9BXW9 1451 aa10.41□□□□□ -0.74
RAPH1-205ENST00000419464 GTF3C3Q9Y5Q9 886 aa10.39□□□□□ -0.75
RAPH1-205ENST00000419464 KIF21AQ7Z4S6 1674 aa10.38□□□□□ -0.75
RAPH1-205ENST00000419464 SPDYE2BA6NHP3 402 aa10.38□□□□□ -0.75
RAPH1-205ENST00000419464 SPDYE6P0CI01 402 aa10.38□□□□□ -0.75
RAPH1-205ENST00000419464 SPDYE2Q495Y8 402 aa10.38□□□□□ -0.75
RAPH1-205ENST00000419464 CEP164Q9UPV0 1460 aa10.38□□□□□ -0.75
RAPH1-205ENST00000419464 IFNLR1Q8IU57 520 aaPredicted RBP10.37□□□□□ -0.75
RAPH1-205ENST00000419464 ERCC6Q03468 1493 aa10.35□□□□□ -0.75
RAPH1-205ENST00000419464 ABCC8Q09428 1581 aa10.35□□□□□ -0.75
RAPH1-205ENST00000419464 RANGAP1P46060 587 aaPredicted RBP10.34□□□□□ -0.75
RAPH1-205ENST00000419464 RBM42Q9BTD8 480 aaKnown RBP10.34□□□□□ -0.75
RAPH1-205ENST00000419464 VSIG10Q8N0Z9 540 aa10.33□□□□□ -0.76
RAPH1-205ENST00000419464 WRNQ14191 1432 aaPredicted RBP eCLIP10.33□□□□□ -0.76
RAPH1-205ENST00000419464 SSUH2Q9Y2M2 353 aa10.32□□□□□ -0.76
RAPH1-205ENST00000419464 MRC2Q9UBG0 1479 aa10.29□□□□□ -0.76
RAPH1-205ENST00000419464 CUX1P39880 1505 aa10.29□□□□□ -0.76
RAPH1-205ENST00000419464 URB2Q14146 1524 aaKnown RBP10.29□□□□□ -0.76
RAPH1-205ENST00000419464 ERICH6Q7L0X2 663 aa10.29□□□□□ -0.76
RAPH1-205ENST00000419464 SYNJ1O43426 1573 aa10.28□□□□□ -0.76
RAPH1-205ENST00000419464 THOC2Q8NI27 1593 aaKnown RBP10.28□□□□□ -0.76
RAPH1-205ENST00000419464 TOPBP1Q92547 1522 aa10.28□□□□□ -0.76
RAPH1-205ENST00000419464 DNMBPQ6XZF7 1577 aa10.27□□□□□ -0.76
RAPH1-205ENST00000419464 TOP2BQ02880 1626 aa10.27□□□□□ -0.76
RAPH1-205ENST00000419464 TRIM41Q8WV44 630 aa10.27□□□□□ -0.77
RAPH1-205ENST00000419464 BIVM-ERCC5R4GMW8 1640 aa10.27□□□□□ -0.77
RAPH1-205ENST00000419464 WDR62O43379 1518 aa10.26□□□□□ -0.77
RAPH1-205ENST00000419464 TTBK1Q5TCY1 1321 aaPredicted RBP10.24□□□□□ -0.77
RAPH1-205ENST00000419464 AKT1S1Q96B36 256 aa10.24□□□□□ -0.77
RAPH1-205ENST00000419464 FGD5Q6ZNL6 1462 aa10.22□□□□□ -0.77
RAPH1-205ENST00000419464 PKD2Q13563 968 aa10.21□□□□□ -0.77
RAPH1-205ENST00000419464 POLA1P09884 1462 aaPredicted RBP10.21□□□□□ -0.77
RAPH1-205ENST00000419464 REM2Q8IYK8 340 aaPredicted RBP10.21□□□□□ -0.78
RAPH1-205ENST00000419464 PELP1Q8IZL8 1130 aaKnown RBP10.2□□□□□ -0.78
RAPH1-205ENST00000419464 PODXL2Q9NZ53 605 aa10.19□□□□□ -0.78
RAPH1-205ENST00000419464 CUX2O14529 1486 aa10.18□□□□□ -0.78
RAPH1-205ENST00000419464 SOGA1O94964 1423 aa10.17□□□□□ -0.78
RAPH1-205ENST00000419464 TMEM132AQ24JP5 1023 aa10.16□□□□□ -0.78
RAPH1-205ENST00000419464 KDM2AQ9Y2K7 1162 aa10.16□□□□□ -0.78
RAPH1-205ENST00000419464 RAD54L2Q9Y4B4 1467 aa10.16□□□□□ -0.78
RAPH1-205ENST00000419464 TARBP1Q13395 1621 aaKnown RBP10.15□□□□□ -0.78
RAPH1-205ENST00000419464 CLEC11AQ9Y240 323 aa10.14□□□□□ -0.79
RAPH1-205ENST00000419464 IFT140Q96RY7 1462 aa10.14□□□□□ -0.79
RAPH1-205ENST00000419464 ABCA10Q8WWZ4 1543 aa10.14□□□□□ -0.79
RAPH1-205ENST00000419464 KLHL34Q8N239 644 aa10.14□□□□□ -0.79
RAPH1-205ENST00000419464 WDR97A6NE52 1622 aa10.12□□□□□ -0.79
RAPH1-205ENST00000419464 PITPNM1O00562 1244 aa10.11□□□□□ -0.79
RAPH1-205ENST00000419464 TDRD9Q8NDG6 1382 aaKnown RBP10.09□□□□□ -0.79
RAPH1-205ENST00000419464 SPDYE1Q8NFV5 336 aaPredicted RBP10.09□□□□□ -0.79
RAPH1-205ENST00000419464 SPOCK2Q92563 424 aa10.09□□□□□ -0.79
RAPH1-205ENST00000419464 STAG3Q9UJ98 1225 aa10.09□□□□□ -0.79
RAPH1-205ENST00000419464 KIF27Q86VH2 1401 aa10.08□□□□□ -0.8
RAPH1-205ENST00000419464 RUSC2Q8N2Y8 1516 aa10.08□□□□□ -0.8
RAPH1-205ENST00000419464 ZNF608Q9ULD9 1512 aaPredicted RBP10.08□□□□□ -0.8
RAPH1-205ENST00000419464 ABCA5Q8WWZ7 1642 aa10.07□□□□□ -0.8
RAPH1-205ENST00000419464 AQRO60306 1485 aaKnown RBP eCLIP10.07□□□□□ -0.8
RAPH1-205ENST00000419464 GAPVD1Q14C86 1478 aa10.06□□□□□ -0.8
RAPH1-205ENST00000419464 EEA1Q15075 1411 aa10.06□□□□□ -0.8
RAPH1-205ENST00000419464 MYT1Q01538 1121 aa10.05□□□□□ -0.8
RAPH1-205ENST00000419464 PLCD3Q8N3E9 789 aa10.05□□□□□ -0.8
RAPH1-205ENST00000419464 EIF4G3O43432 1585 aaKnown RBP10.05□□□□□ -0.8
RAPH1-205ENST00000419464 FAM9AQ8IZU1 332 aaPredicted RBP10.04□□□□□ -0.8
RAPH1-205ENST00000419464 IGF1RP08069 1367 aa10.03□□□□□ -0.8
RAPH1-205ENST00000419464 C14orf37Q86TY3 774 aa10.03□□□□□ -0.8
RAPH1-205ENST00000419464 MIER1Q8N108 512 aa10.03□□□□□ -0.8
RAPH1-205ENST00000419464 ERICH3Q5RHP9 1530 aa10.02□□□□□ -0.81
RAPH1-205ENST00000419464 GRIN2BQ13224 1484 aa10.02□□□□□ -0.81
RAPH1-205ENST00000419464 PBRM1Q86U86 1689 aa10.01□□□□□ -0.81
RAPH1-205ENST00000419464 ECM2O94769 699 aaPredicted RBP10.01□□□□□ -0.81
RAPH1-205ENST00000419464 PRR29P0C7W0 189 aa10□□□□□ -0.81
RAPH1-205ENST00000419464 CHRDL2Q6WN34 429 aa9.99□□□□□ -0.81
RAPH1-205ENST00000419464 NPM1P06748 294 aaKnown RBP eCLIP9.97□□□□□ -0.81
RAPH1-205ENST00000419464 CUL7Q14999 1698 aa9.97□□□□□ -0.81
RAPH1-205ENST00000419464 PRXQ9BXM0 1461 aa9.97□□□□□ -0.81
RAPH1-205ENST00000419464 CARMIL1Q5VZK9 1371 aa9.96□□□□□ -0.81
RAPH1-205ENST00000419464 SNAPC4Q5SXM2 1469 aa9.96□□□□□ -0.82
RAPH1-205ENST00000419464 MAGI1Q96QZ7 1491 aaPredicted RBP9.96□□□□□ -0.82
RAPH1-205ENST00000419464 NPM2Q86SE8 214 aaKnown RBP9.96□□□□□ -0.82
RAPH1-205ENST00000419464 RGL2O15211 777 aa9.95□□□□□ -0.82
RAPH1-205ENST00000419464 ADAMTS12P58397 1594 aa9.94□□□□□ -0.82
RAPH1-205ENST00000419464 FHAD1B1AJZ9 1412 aa9.94□□□□□ -0.82
RAPH1-205ENST00000419464 KIF21BO75037 1637 aa9.94□□□□□ -0.82
RAPH1-205ENST00000419464 RAPGEF2Q9Y4G8 1499 aa9.93□□□□□ -0.82
RAPH1-205ENST00000419464 SYNJ2O15056 1496 aa9.93□□□□□ -0.82
RAPH1-205ENST00000419464 CHADLQ6NUI6 762 aa9.92□□□□□ -0.82
RAPH1-205ENST00000419464 CHMP7Q8WUX9 453 aaPredicted RBP9.91□□□□□ -0.82
RAPH1-205ENST00000419464 BBXQ8WY36 941 aaPredicted RBP9.91□□□□□ -0.82
RAPH1-205ENST00000419464 LOC105371045A0A1W2PR82 267 aa9.89□□□□□ -0.83
RAPH1-205ENST00000419464 GOLGA3Q08378 1498 aa9.89□□□□□ -0.83
RAPH1-205ENST00000419464 GRIN2AQ12879 1464 aa9.89□□□□□ -0.83
RAPH1-205ENST00000419464 CIZ1Q9ULV3 898 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms