RNA–Protein interactions for RNA: ENST00000417996.2

KRT3-201, Transcript of keratin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT3, Length 2,319 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3-201ENST00000417996 DNMBPQ6XZF7 1577 aa29.78■■■□□ 2.36
KRT3-201ENST00000417996 RAB3GAP2Q9H2M9 1393 aa29.75■■■□□ 2.35
KRT3-201ENST00000417996 FHAD1B1AJZ9 1412 aa29.74■■■□□ 2.35
KRT3-201ENST00000417996 NESP48681 1621 aa29.74■■■□□ 2.35
KRT3-201ENST00000417996 ATP1B4Q9UN42 357 aaPredicted RBP29.74■■■□□ 2.35
KRT3-201ENST00000417996 TOPBP1Q92547 1522 aa29.73■■■□□ 2.35
KRT3-201ENST00000417996 POLA1P09884 1462 aaPredicted RBP29.73■■■□□ 2.35
KRT3-201ENST00000417996 PHLDB1Q86UU1 1377 aa29.72■■■□□ 2.35
KRT3-201ENST00000417996 PCF11O94913 1555 aaKnown RBP29.72■■■□□ 2.35
KRT3-201ENST00000417996 ABCA10Q8WWZ4 1543 aa29.71■■■□□ 2.35
KRT3-201ENST00000417996 FHOD3Q2V2M9 1422 aa29.68■■■□□ 2.34
KRT3-201ENST00000417996 CFAP43Q8NDM7 1665 aa29.66■■■□□ 2.34
KRT3-201ENST00000417996 FAM50AQ14320 339 aaKnown RBP29.66■■■□□ 2.34
KRT3-201ENST00000417996 SETD5Q9C0A6 1442 aa29.62■■■□□ 2.33
KRT3-201ENST00000417996 MAPKBP1O60336 1514 aa29.61■■■□□ 2.33
KRT3-201ENST00000417996 CUL7Q14999 1698 aa29.57■■■□□ 2.32
KRT3-201ENST00000417996 EFCAB5A4FU69 1503 aa29.55■■■□□ 2.32
KRT3-201ENST00000417996 FYCO1Q9BQS8 1478 aa29.54■■■□□ 2.32
KRT3-201ENST00000417996 CTTNBP2Q8WZ74 1663 aa29.52■■■□□ 2.32
KRT3-201ENST00000417996 DNAJC5BQ9UF47 199 aa29.51■■■□□ 2.31
KRT3-201ENST00000417996 CASKIN1Q8WXD9 1431 aa29.51■■■□□ 2.31
KRT3-201ENST00000417996 URB2Q14146 1524 aaKnown RBP29.49■■■□□ 2.31
KRT3-201ENST00000417996 AQRO60306 1485 aaKnown RBP eCLIP29.45■■■□□ 2.31
KRT3-201ENST00000417996 LAMC3Q9Y6N6 1575 aa29.45■■■□□ 2.3
KRT3-201ENST00000417996 WDR97A6NE52 1622 aa29.44■■■□□ 2.3
KRT3-201ENST00000417996 TDRD9Q8NDG6 1382 aaKnown RBP29.43■■■□□ 2.3
KRT3-201ENST00000417996 SIN3AQ96ST3 1273 aa29.43■■■□□ 2.3
KRT3-201ENST00000417996 FMN1Q68DA7 1419 aa29.4■■■□□ 2.3
KRT3-201ENST00000417996 SNAPC4Q5SXM2 1469 aa29.35■■■□□ 2.29
KRT3-201ENST00000417996 ABCA5Q8WWZ7 1642 aa29.35■■■□□ 2.29
KRT3-201ENST00000417996 GAPVD1Q14C86 1478 aa29.33■■■□□ 2.29
KRT3-201ENST00000417996 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.32■■■□□ 2.28
KRT3-201ENST00000417996 MTUS2Q5JR59 1369 aa29.31■■■□□ 2.28
KRT3-201ENST00000417996 FGD6Q6ZV73 1430 aa29.3■■■□□ 2.28
KRT3-201ENST00000417996 PDS5BQ9NTI5 1447 aa29.28■■■□□ 2.28
KRT3-201ENST00000417996 SAMD9Q5K651 1589 aa29.28■■■□□ 2.28
KRT3-201ENST00000417996 LRRIQ1Q96JM4 1722 aa29.23■■■□□ 2.27
KRT3-201ENST00000417996 KIF21AQ7Z4S6 1674 aa29.21■■■□□ 2.27
KRT3-201ENST00000417996 GRIN2BQ13224 1484 aa29.18■■■□□ 2.26
KRT3-201ENST00000417996 TIMELESSQ9UNS1 1208 aa29.18■■■□□ 2.26
KRT3-201ENST00000417996 KCNH8Q96L42 1107 aa29.17■■■□□ 2.26
KRT3-201ENST00000417996 PTPRKQ15262 1439 aa29.17■■■□□ 2.26
KRT3-201ENST00000417996 DDX10Q13206 875 aaKnown RBP29.16■■■□□ 2.26
KRT3-201ENST00000417996 NCOA2Q15596 1464 aa29.16■■■□□ 2.26
KRT3-201ENST00000417996 CCDC18Q5T9S5 1454 aa29.15■■■□□ 2.26
KRT3-201ENST00000417996 PPP1R15AO75807 674 aaPredicted RBP29.12■■■□□ 2.25
KRT3-201ENST00000417996 MYOM3Q5VTT5 1437 aa29.12■■■□□ 2.25
KRT3-201ENST00000417996 HIRIP3Q9BW71 556 aaPredicted RBP29.11■■■□□ 2.25
KRT3-201ENST00000417996 TARBP1Q13395 1621 aaKnown RBP29.1■■■□□ 2.25
KRT3-201ENST00000417996 HFM1A2PYH4 1435 aa29.1■■■□□ 2.25
KRT3-201ENST00000417996 SUPT6HQ7KZ85 1726 aaKnown RBP29.09■■■□□ 2.25
KRT3-201ENST00000417996 THOC2Q8NI27 1593 aaKnown RBP29.09■■■□□ 2.25
KRT3-201ENST00000417996 PTPN23Q9H3S7 1636 aa29.08■■■□□ 2.25
KRT3-201ENST00000417996 EHBP1L1Q8N3D4 1523 aa29.07■■■□□ 2.24
KRT3-201ENST00000417996 SUPT16HQ9Y5B9 1047 aaKnown RBP29.05■■■□□ 2.24
KRT3-201ENST00000417996 UACAQ9BZF9 1416 aa29.04■■■□□ 2.24
KRT3-201ENST00000417996 TONSLQ96HA7 1378 aa29.04■■■□□ 2.24
KRT3-201ENST00000417996 NAIPQ13075 1403 aa29.02■■■□□ 2.24
KRT3-201ENST00000417996 MAGI3Q5TCQ9 1506 aa29.01■■■□□ 2.24
KRT3-201ENST00000417996 PBRM1Q86U86 1689 aa29■■■□□ 2.23
KRT3-201ENST00000417996 UGGT2Q9NYU1 1516 aa28.99■■■□□ 2.23
KRT3-201ENST00000417996 ARHGEF11O15085 1522 aa28.94■■■□□ 2.22
KRT3-201ENST00000417996 IQGAP2Q13576 1575 aa28.93■■■□□ 2.22
KRT3-201ENST00000417996 RRP7BPQ9NSQ0 103 aa28.92■■■□□ 2.22
KRT3-201ENST00000417996 CHIC2Q9UKJ5 165 aa28.92■■■□□ 2.22
KRT3-201ENST00000417996 HECW1Q76N89 1606 aa28.92■■■□□ 2.22
KRT3-201ENST00000417996 ADAMTS12P58397 1594 aa28.9■■■□□ 2.22
KRT3-201ENST00000417996 ARID3CA6NKF2 412 aa28.89■■■□□ 2.22
KRT3-201ENST00000417996 EPRSP07814 1512 aaKnown RBP28.87■■■□□ 2.21
KRT3-201ENST00000417996 CDK13Q14004 1512 aaKnown RBP28.85■■■□□ 2.21
KRT3-201ENST00000417996 TCOF1Q13428 1488 aaKnown RBP28.84■■■□□ 2.21
KRT3-201ENST00000417996 MRC2Q9UBG0 1479 aa28.84■■■□□ 2.21
KRT3-201ENST00000417996 ANP32CO43423 234 aa28.83■■■□□ 2.21
KRT3-201ENST00000417996 TRIM52Q96A61 297 aa28.8■■■□□ 2.2
KRT3-201ENST00000417996 WDR62O43379 1518 aa28.78■■■□□ 2.2
KRT3-201ENST00000417996 GCC2Q8IWJ2 1684 aa28.77■■■□□ 2.2
KRT3-201ENST00000417996 KDM5BQ9UGL1 1544 aa28.76■■■□□ 2.19
KRT3-201ENST00000417996 CCER2I3L3R5 266 aa28.76■■■□□ 2.19
KRT3-201ENST00000417996 KDM6BO15054 1643 aa28.75■■■□□ 2.19
KRT3-201ENST00000417996 ZNF608Q9ULD9 1512 aaPredicted RBP28.74■■■□□ 2.19
KRT3-201ENST00000417996 MIA2Q96PC5 1412 aa28.72■■■□□ 2.19
KRT3-201ENST00000417996 DENND4BO75064 1496 aaPredicted RBP28.71■■■□□ 2.19
KRT3-201ENST00000417996 AKNAQ7Z591 1439 aa28.69■■■□□ 2.18
KRT3-201ENST00000417996 IFT140Q96RY7 1462 aa28.66■■■□□ 2.18
KRT3-201ENST00000417996 MPHOSPH9Q99550 1183 aa28.65■■■□□ 2.18
KRT3-201ENST00000417996 BCANQ96GW7 911 aa28.63■■■□□ 2.17
KRT3-201ENST00000417996 KIAA0556O60303 1618 aa28.62■■■□□ 2.17
KRT3-201ENST00000417996 FOXD1Q16676 465 aa28.61■■■□□ 2.17
KRT3-201ENST00000417996 DISP1Q96F81 1524 aa28.61■■■□□ 2.17
KRT3-201ENST00000417996 KIAA0586Q9BVV6 1533 aa28.61■■■□□ 2.17
KRT3-201ENST00000417996 FKBP8Q14318 412 aa28.61■■■□□ 2.17
KRT3-201ENST00000417996 HSPA5P11021 654 aaKnown RBP28.59■■■□□ 2.17
KRT3-201ENST00000417996 DAPK1P53355 1430 aa28.57■■■□□ 2.16
KRT3-201ENST00000417996 NUP153P49790 1475 aaKnown RBP28.57■■■□□ 2.16
KRT3-201ENST00000417996 ZNF644Q9H582 1327 aaPredicted RBP28.56■■■□□ 2.16
KRT3-201ENST00000417996 L3MBTL2Q969R5 705 aa28.53■■■□□ 2.16
KRT3-201ENST00000417996 GRIN2AQ12879 1464 aa28.53■■■□□ 2.16
KRT3-201ENST00000417996 WASHC2AQ641Q2 1341 aa28.53■■■□□ 2.16
KRT3-201ENST00000417996 RAPGEF6Q8TEU7 1601 aa28.53■■■□□ 2.16
KRT3-201ENST00000417996 TSHZ2Q9NRE2 1034 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms