RNA–Protein interactions for RNA: ENST00000412923.6

PCDH18-202, Transcript of protocadherin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH18, Length 5,102 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-202ENST00000412923 TAF3Q5VWG9 929 aa8.34□□□□□ -1.07
PCDH18-202ENST00000412923 CHAF1AQ13111 956 aaPredicted RBP8.34□□□□□ -1.07
PCDH18-202ENST00000412923 BRD2P25440 801 aaKnown RBP8.34□□□□□ -1.07
PCDH18-202ENST00000412923 SETQ01105 290 aaPredicted RBP8.33□□□□□ -1.08
PCDH18-202ENST00000412923 MTERF4Q7Z6M4 381 aaKnown RBP8.33□□□□□ -1.08
PCDH18-202ENST00000412923 BECN1Q14457 450 aa8.32□□□□□ -1.08
PCDH18-202ENST00000412923 GOLGA6L1Q8N7Z2 621 aa8.32□□□□□ -1.08
PCDH18-202ENST00000412923 ANP32CO43423 234 aa8.31□□□□□ -1.08
PCDH18-202ENST00000412923 TPRNQ4KMQ1 711 aa8.31□□□□□ -1.08
PCDH18-202ENST00000412923 PATL2C9JE40 543 aaKnown RBP8.31□□□□□ -1.08
PCDH18-202ENST00000412923 NEFHP12036 1026 aa8.31□□□□□ -1.08
PCDH18-202ENST00000412923 FBXO3Q9UK99 471 aa8.31□□□□□ -1.08
PCDH18-202ENST00000412923 CCDC136Q96JN2 1154 aa8.3□□□□□ -1.08
PCDH18-202ENST00000412923 MSNP26038 577 aaKnown RBP8.3□□□□□ -1.08
PCDH18-202ENST00000412923 STK11IPQ8N1F8 1099 aa8.3□□□□□ -1.08
PCDH18-202ENST00000412923 USP35Q9P2H5 1018 aa8.29□□□□□ -1.08
PCDH18-202ENST00000412923 RRP9O43818 475 aaKnown RBP8.24□□□□□ -1.09
PCDH18-202ENST00000412923 ANO8Q9HCE9 1232 aaPredicted RBP8.24□□□□□ -1.09
PCDH18-202ENST00000412923 CCDC66A2RUB6 948 aa8.23□□□□□ -1.09
PCDH18-202ENST00000412923 ZNF526Q8TF50 670 aaPredicted RBP8.23□□□□□ -1.09
PCDH18-202ENST00000412923 NOM1Q5C9Z4 860 aaKnown RBP8.22□□□□□ -1.09
PCDH18-202ENST00000412923 TSPYL1Q9H0U9 437 aa8.22□□□□□ -1.09
PCDH18-202ENST00000412923 PSMD1Q99460 953 aa8.21□□□□□ -1.09
PCDH18-202ENST00000412923 HMGB1P1B2RPK0 211 aaPredicted RBP8.21□□□□□ -1.1
PCDH18-202ENST00000412923 SSR1P43307 286 aaKnown RBP8.2□□□□□ -1.1
PCDH18-202ENST00000412923 AXDND1Q5T1B0 1012 aaPredicted RBP8.2□□□□□ -1.1
PCDH18-202ENST00000412923 CC2D1BQ5T0F9 858 aaKnown RBP8.18□□□□□ -1.1
PCDH18-202ENST00000412923 TPM2P07951 284 aa8.18□□□□□ -1.1
PCDH18-202ENST00000412923 NRDCO43847 1150 aa8.17□□□□□ -1.1
PCDH18-202ENST00000412923 CLSTN1O94985 981 aa8.17□□□□□ -1.1
PCDH18-202ENST00000412923 PLCD4Q9BRC7 762 aa8.17□□□□□ -1.1
PCDH18-202ENST00000412923 BCCIPQ9P287 314 aaKnown RBP eCLIP8.17□□□□□ -1.1
PCDH18-202ENST00000412923 ZNF771Q7L3S4 317 aaPredicted RBP8.17□□□□□ -1.1
PCDH18-202ENST00000412923 RBM19Q9Y4C8 960 aaKnown RBP8.16□□□□□ -1.1
PCDH18-202ENST00000412923 CLGNO14967 610 aa8.16□□□□□ -1.1
PCDH18-202ENST00000412923 ZBTB7CA1YPR0 619 aa8.15□□□□□ -1.1
PCDH18-202ENST00000412923 AEBP2Q6ZN18 517 aaPredicted RBP8.15□□□□□ -1.1
PCDH18-202ENST00000412923 PLEKHG5O94827 1062 aa8.14□□□□□ -1.11
PCDH18-202ENST00000412923 IRX3P78415 501 aaPredicted RBP8.13□□□□□ -1.11
PCDH18-202ENST00000412923 KIAA2012Q0VF49 1180 aa8.12□□□□□ -1.11
PCDH18-202ENST00000412923 SUPT16HQ9Y5B9 1047 aaKnown RBP8.12□□□□□ -1.11
PCDH18-202ENST00000412923 PLPPR3Q6T4P5 718 aa8.12□□□□□ -1.11
PCDH18-202ENST00000412923 PAIP2Q9BPZ3 127 aaKnown RBP8.12□□□□□ -1.11
PCDH18-202ENST00000412923 CWC15Q9P013 229 aaKnown RBP8.11□□□□□ -1.11
PCDH18-202ENST00000412923 TIMELESSQ9UNS1 1208 aa8.11□□□□□ -1.11
PCDH18-202ENST00000412923 TEX35Q5T0J7 233 aa8.1□□□□□ -1.11
PCDH18-202ENST00000412923 RBM28Q9NW13 759 aaKnown RBP8.1□□□□□ -1.11
PCDH18-202ENST00000412923 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.1□□□□□ -1.11
PCDH18-202ENST00000412923 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.1□□□□□ -1.11
PCDH18-202ENST00000412923 SALL2Q9Y467 1007 aaPredicted RBP8.1□□□□□ -1.11
PCDH18-202ENST00000412923 GPS2Q13227 327 aa8.1□□□□□ -1.11
PCDH18-202ENST00000412923 BBXQ8WY36 941 aaPredicted RBP8.1□□□□□ -1.11
PCDH18-202ENST00000412923 TSHZ2Q9NRE2 1034 aa8.1□□□□□ -1.11
PCDH18-202ENST00000412923 CSPP1Q1MSJ5 1256 aa8.09□□□□□ -1.11
PCDH18-202ENST00000412923 ZMYND15Q9H091 742 aa8.09□□□□□ -1.11
PCDH18-202ENST00000412923 FAM43AQ8N2R8 423 aa8.09□□□□□ -1.11
PCDH18-202ENST00000412923 FANCIQ9NVI1 1328 aa8.09□□□□□ -1.11
PCDH18-202ENST00000412923 PPP4R2Q9NY27 417 aa8.08□□□□□ -1.12
PCDH18-202ENST00000412923 ARID3AQ99856 593 aa8.08□□□□□ -1.12
PCDH18-202ENST00000412923 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.08□□□□□ -1.12
PCDH18-202ENST00000412923 HTATSF1O43719 755 aaKnown RBP8.07□□□□□ -1.12
PCDH18-202ENST00000412923 KLHL34Q8N239 644 aa8.07□□□□□ -1.12
PCDH18-202ENST00000412923 MEX3CQ5U5Q3 659 aaKnown RBP8.07□□□□□ -1.12
PCDH18-202ENST00000412923 TRIM41Q8WV44 630 aa8.07□□□□□ -1.12
PCDH18-202ENST00000412923 PAXIP1Q6ZW49 1069 aaPredicted RBP8.07□□□□□ -1.12
PCDH18-202ENST00000412923 USP8P40818 1118 aa8.06□□□□□ -1.12
PCDH18-202ENST00000412923 OS9Q13438 667 aaPredicted RBP8.06□□□□□ -1.12
PCDH18-202ENST00000412923 TAOK2Q9UL54 1235 aa8.06□□□□□ -1.12
PCDH18-202ENST00000412923 GSE1Q14687 1217 aa8.05□□□□□ -1.12
PCDH18-202ENST00000412923 TCERG1O14776 1098 aaKnown RBP8.05□□□□□ -1.12
PCDH18-202ENST00000412923 RBM10P98175 930 aaKnown RBP8.05□□□□□ -1.12
PCDH18-202ENST00000412923 WWC1Q8IX03 1113 aa8.05□□□□□ -1.12
PCDH18-202ENST00000412923 GOLGA6L4A6NEF3 574 aa8.04□□□□□ -1.12
PCDH18-202ENST00000412923 DEF6Q9H4E7 631 aa8.04□□□□□ -1.12
PCDH18-202ENST00000412923 NAP1L2Q9ULW6 460 aaPredicted RBP8.03□□□□□ -1.12
PCDH18-202ENST00000412923 RDXP35241 583 aaKnown RBP8.03□□□□□ -1.12
PCDH18-202ENST00000412923 BCL11BQ9C0K0 894 aaPredicted RBP8.03□□□□□ -1.12
PCDH18-202ENST00000412923 TMX4Q9H1E5 349 aaPredicted RBP8.03□□□□□ -1.12
PCDH18-202ENST00000412923 FAM193AP78312 1265 aa8.03□□□□□ -1.12
PCDH18-202ENST00000412923 MYH16Q9H6N6 1097 aa8.02□□□□□ -1.13
PCDH18-202ENST00000412923 SETSIPP0DME0 302 aa8.02□□□□□ -1.13
PCDH18-202ENST00000412923 IPO9Q96P70 1041 aaKnown RBP8.02□□□□□ -1.13
PCDH18-202ENST00000412923 ZNF622Q969S3 477 aaKnown RBP eCLIP8.01□□□□□ -1.13
PCDH18-202ENST00000412923 PES1O00541 588 aaKnown RBP8.01□□□□□ -1.13
PCDH18-202ENST00000412923 DNAJC2Q99543 621 aaKnown RBP8.01□□□□□ -1.13
PCDH18-202ENST00000412923 DCAF1Q9Y4B6 1507 aa8□□□□□ -1.13
PCDH18-202ENST00000412923 FGD1P98174 961 aa8□□□□□ -1.13
PCDH18-202ENST00000412923 ITGAEP38570 1179 aa7.99□□□□□ -1.13
PCDH18-202ENST00000412923 HNRNPUQ00839 825 aaKnown RBP eCLIP7.99□□□□□ -1.13
PCDH18-202ENST00000412923 ZRSR1Q15695 479 aaKnown RBP7.98□□□□□ -1.13
PCDH18-202ENST00000412923 PDCL3Q9H2J4 239 aa7.98□□□□□ -1.13
PCDH18-202ENST00000412923 FTSJ3Q8IY81 847 aaKnown RBP7.98□□□□□ -1.13
PCDH18-202ENST00000412923 GBP4Q96PP9 640 aa7.97□□□□□ -1.13
PCDH18-202ENST00000412923 CHMP4AQ9BY43 222 aa7.97□□□□□ -1.13
PCDH18-202ENST00000412923 TMCO5BA8MYB1 307 aa7.97□□□□□ -1.13
PCDH18-202ENST00000412923 FAM13BQ9NYF5 915 aa7.97□□□□□ -1.13
PCDH18-202ENST00000412923 CTR9Q6PD62 1173 aa7.96□□□□□ -1.13
PCDH18-202ENST00000412923 MNS1Q8NEH6 495 aa7.96□□□□□ -1.14
PCDH18-202ENST00000412923 CHMP3Q9Y3E7 222 aa7.96□□□□□ -1.14
PCDH18-202ENST00000412923 CASC1Q6TDU7 716 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 183.5 ms