RNA–Protein interactions for RNA: ENST00000412923.6

PCDH18-202, Transcript of protocadherin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH18, Length 5,102 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-202ENST00000412923 MYT1Q01538 1121 aa11.49□□□□□ -0.57
PCDH18-202ENST00000412923 PELP1Q8IZL8 1130 aaKnown RBP11.21□□□□□ -0.61
PCDH18-202ENST00000412923 TTBK1Q5TCY1 1321 aaPredicted RBP10.7□□□□□ -0.7
PCDH18-202ENST00000412923 ERICH6Q7L0X2 663 aa10.5□□□□□ -0.73
PCDH18-202ENST00000412923 CCER1Q8TC90 406 aaPredicted RBP10.1□□□□□ -0.79
PCDH18-202ENST00000412923 YTHDC1Q96MU7 727 aaKnown RBP10.08□□□□□ -0.8
PCDH18-202ENST00000412923 RANGAP1P46060 587 aaPredicted RBP10□□□□□ -0.81
PCDH18-202ENST00000412923 CENPBP07199 599 aaPredicted RBP9.96□□□□□ -0.81
PCDH18-202ENST00000412923 SLC24A1O60721 1099 aa9.86□□□□□ -0.83
PCDH18-202ENST00000412923 GLIPR1L2Q4G1C9 344 aa9.72□□□□□ -0.85
PCDH18-202ENST00000412923 ZEB1P37275 1124 aaPredicted RBP9.65□□□□□ -0.86
PCDH18-202ENST00000412923 MYT1LQ9UL68 1186 aa9.51□□□□□ -0.89
PCDH18-202ENST00000412923 NEFLP07196 543 aa9.45□□□□□ -0.9
PCDH18-202ENST00000412923 RTL5Q5HYW3 569 aaPredicted RBP9.44□□□□□ -0.9
PCDH18-202ENST00000412923 EIF5BO60841 1220 aaKnown RBP9.4□□□□□ -0.91
PCDH18-202ENST00000412923 DCAF8L2P0C7V8 631 aa9.34□□□□□ -0.91
PCDH18-202ENST00000412923 DAXXQ9UER7 740 aaPredicted RBP9.27□□□□□ -0.92
PCDH18-202ENST00000412923 EHMT2Q96KQ7 1210 aa9.25□□□□□ -0.93
PCDH18-202ENST00000412923 HRCP23327 699 aa9.23□□□□□ -0.93
PCDH18-202ENST00000412923 POLR3GLQ9BT43 218 aa9.22□□□□□ -0.93
PCDH18-202ENST00000412923 CLSPNQ9HAW4 1339 aa9.21□□□□□ -0.93
PCDH18-202ENST00000412923 BCL11AQ9H165 835 aa9.16□□□□□ -0.94
PCDH18-202ENST00000412923 NCLP19338 710 aaKnown RBP9.13□□□□□ -0.95
PCDH18-202ENST00000412923 ZNF326Q5BKZ1 582 aaKnown RBP9.1□□□□□ -0.95
PCDH18-202ENST00000412923 PCGF6Q9BYE7 350 aa9.1□□□□□ -0.95
PCDH18-202ENST00000412923 ZNF316A6NFI3 1004 aaPredicted RBP9.09□□□□□ -0.95
PCDH18-202ENST00000412923 TNNT2P45379 298 aaPredicted RBP9.07□□□□□ -0.96
PCDH18-202ENST00000412923 FAM9AQ8IZU1 332 aaPredicted RBP8.99□□□□□ -0.97
PCDH18-202ENST00000412923 ANP32EQ9BTT0 268 aa8.98□□□□□ -0.97
PCDH18-202ENST00000412923 PRKCSHP14314 528 aaPredicted RBP8.98□□□□□ -0.97
PCDH18-202ENST00000412923 GTF3C3Q9Y5Q9 886 aa8.97□□□□□ -0.97
PCDH18-202ENST00000412923 TRIM44Q96DX7 344 aaPredicted RBP8.96□□□□□ -0.97
PCDH18-202ENST00000412923 CDK11BP21127 795 aaKnown RBP8.96□□□□□ -0.98
PCDH18-202ENST00000412923 ACIN1Q9UKV3 1341 aaKnown RBP8.93□□□□□ -0.98
PCDH18-202ENST00000412923 PTMSP20962 102 aa8.92□□□□□ -0.98
PCDH18-202ENST00000412923 PODXL2Q9NZ53 605 aa8.91□□□□□ -0.98
PCDH18-202ENST00000412923 CDK11AQ9UQ88 783 aaPredicted RBP8.91□□□□□ -0.98
PCDH18-202ENST00000412923 ERICH6BQ5W0A0 696 aa8.88□□□□□ -0.99
PCDH18-202ENST00000412923 ANP32AP39687 249 aaKnown RBP8.83□□□□□ -1
PCDH18-202ENST00000412923 APLP2Q06481 763 aa8.83□□□□□ -1
PCDH18-202ENST00000412923 ANP32BQ92688 251 aaKnown RBP8.83□□□□□ -1
PCDH18-202ENST00000412923 HOMEZQ8IX15 550 aa8.82□□□□□ -1
PCDH18-202ENST00000412923 HMGB1P09429 215 aaKnown RBP8.81□□□□□ -1
PCDH18-202ENST00000412923 TRIM26Q12899 539 aaPredicted RBP8.77□□□□□ -1.01
PCDH18-202ENST00000412923 PKNOX2Q96KN3 472 aa8.76□□□□□ -1.01
PCDH18-202ENST00000412923 DIEXFQ68CQ4 756 aaKnown RBP8.74□□□□□ -1.01
PCDH18-202ENST00000412923 NISCHQ9Y2I1 1504 aa8.73□□□□□ -1.01
PCDH18-202ENST00000412923 CNGB1Q14028 1251 aaPredicted RBP8.7□□□□□ -1.02
PCDH18-202ENST00000412923 ARXQ96QS3 562 aa8.7□□□□□ -1.02
PCDH18-202ENST00000412923 CALRP27797 417 aaKnown RBP8.66□□□□□ -1.02
PCDH18-202ENST00000412923 SCAF1Q9H7N4 1312 aaKnown RBP8.65□□□□□ -1.02
PCDH18-202ENST00000412923 AMER1Q5JTC6 1135 aaPredicted RBP8.64□□□□□ -1.03
PCDH18-202ENST00000412923 NCBP3Q53F19 620 aaKnown RBP8.63□□□□□ -1.03
PCDH18-202ENST00000412923 HSP90AA1P07900 732 aaKnown RBP8.63□□□□□ -1.03
PCDH18-202ENST00000412923 RSPH6AQ9H0K4 717 aa8.62□□□□□ -1.03
PCDH18-202ENST00000412923 C14orf37Q86TY3 774 aa8.62□□□□□ -1.03
PCDH18-202ENST00000412923 NAP1L5Q96NT1 182 aaPredicted RBP8.6□□□□□ -1.03
PCDH18-202ENST00000412923 ZBTB47Q9UFB7 747 aaPredicted RBP8.6□□□□□ -1.03
PCDH18-202ENST00000412923 PDE4CQ08493 712 aa8.6□□□□□ -1.03
PCDH18-202ENST00000412923 LAS1LQ9Y4W2 734 aaKnown RBP8.6□□□□□ -1.03
PCDH18-202ENST00000412923 SUPT5HO00267 1087 aaKnown RBP8.6□□□□□ -1.03
PCDH18-202ENST00000412923 APPP05067 770 aa8.59□□□□□ -1.04
PCDH18-202ENST00000412923 NPM2Q86SE8 214 aaKnown RBP8.57□□□□□ -1.04
PCDH18-202ENST00000412923 VSIG10Q8N0Z9 540 aa8.56□□□□□ -1.04
PCDH18-202ENST00000412923 NEFMP07197 916 aa8.56□□□□□ -1.04
PCDH18-202ENST00000412923 PPARGC1BQ86YN6 1023 aaKnown RBP8.55□□□□□ -1.04
PCDH18-202ENST00000412923 PPM1GO15355 546 aaPredicted RBP8.55□□□□□ -1.04
PCDH18-202ENST00000412923 TNNT3P45378 269 aaPredicted RBP8.54□□□□□ -1.04
PCDH18-202ENST00000412923 DEKP35659 375 aaKnown RBP8.53□□□□□ -1.04
PCDH18-202ENST00000412923 NBR1Q14596 966 aa8.52□□□□□ -1.05
PCDH18-202ENST00000412923 A0A0U1RQG5 324 aaPredicted RBP8.51□□□□□ -1.05
PCDH18-202ENST00000412923 UBE2Q2Q8WVN8 375 aa8.51□□□□□ -1.05
PCDH18-202ENST00000412923 HSP90AA2PQ14568 343 aaPredicted RBP8.51□□□□□ -1.05
PCDH18-202ENST00000412923 BCANQ96GW7 911 aa8.5□□□□□ -1.05
PCDH18-202ENST00000412923 HAP1P54257 671 aaPredicted RBP8.49□□□□□ -1.05
PCDH18-202ENST00000412923 DDRGK1Q96HY6 314 aa8.49□□□□□ -1.05
PCDH18-202ENST00000412923 TULP1O00294 542 aaPredicted RBP8.49□□□□□ -1.05
PCDH18-202ENST00000412923 TAF7LQ5H9L4 462 aa8.48□□□□□ -1.05
PCDH18-202ENST00000412923 ARID4BQ4LE39 1312 aaPredicted RBP8.48□□□□□ -1.05
PCDH18-202ENST00000412923 PDIA4P13667 645 aaKnown RBP8.47□□□□□ -1.05
PCDH18-202ENST00000412923 CANXP27824 592 aaKnown RBP8.47□□□□□ -1.05
PCDH18-202ENST00000412923 PTMAP06454 111 aaKnown RBP8.47□□□□□ -1.05
PCDH18-202ENST00000412923 ATP1B4Q9UN42 357 aaPredicted RBP8.47□□□□□ -1.05
PCDH18-202ENST00000412923 HSP90B1P14625 803 aaKnown RBP8.47□□□□□ -1.05
PCDH18-202ENST00000412923 L1TD1Q5T7N2 865 aaKnown RBP8.45□□□□□ -1.06
PCDH18-202ENST00000412923 NEUROD1Q13562 356 aa8.43□□□□□ -1.06
PCDH18-202ENST00000412923 DNTTIP2Q5QJE6 756 aaKnown RBP8.43□□□□□ -1.06
PCDH18-202ENST00000412923 CSRNP3Q8WYN3 585 aa8.43□□□□□ -1.06
PCDH18-202ENST00000412923 RTN4Q9NQC3 1192 aaKnown RBP8.43□□□□□ -1.06
PCDH18-202ENST00000412923 PNNQ9H307 717 aaKnown RBP8.41□□□□□ -1.06
PCDH18-202ENST00000412923 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.41□□□□□ -1.06
PCDH18-202ENST00000412923 GOLGA6L22H0YM25 854 aa8.4□□□□□ -1.06
PCDH18-202ENST00000412923 CCDC9Q9Y3X0 531 aaKnown RBP8.39□□□□□ -1.07
PCDH18-202ENST00000412923 GOLGA6L6A8MZA4 724 aa8.39□□□□□ -1.07
PCDH18-202ENST00000412923 UPF2Q9HAU5 1272 aaKnown RBP8.39□□□□□ -1.07
PCDH18-202ENST00000412923 NOP58Q9Y2X3 529 aaKnown RBP8.37□□□□□ -1.07
PCDH18-202ENST00000412923 GOLGA6L3A6NEY3 463 aa8.37□□□□□ -1.07
PCDH18-202ENST00000412923 FKBP8Q14318 412 aa8.36□□□□□ -1.07
PCDH18-202ENST00000412923 MAP7D2Q96T17 732 aa8.35□□□□□ -1.07
PCDH18-202ENST00000412923 SHROOM4Q9ULL8 1493 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms