RNA–Protein interactions for RNA: ENST00000411539.6

SEMA4B-202, Transcript of semaphorin 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4B, Length 3,807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-202ENST00000411539 SENP3-EIF4A1A0A087X0R7 540 aa22.46■■□□□ 1.19
SEMA4B-202ENST00000411539 DEKP35659 375 aaKnown RBP22.46■■□□□ 1.19
SEMA4B-202ENST00000411539 ZBTB47Q9UFB7 747 aaPredicted RBP22.45■■□□□ 1.18
SEMA4B-202ENST00000411539 RAB3GAP2Q9H2M9 1393 aa22.45■■□□□ 1.18
SEMA4B-202ENST00000411539 RAPGEF2Q9Y4G8 1499 aa22.43■■□□□ 1.18
SEMA4B-202ENST00000411539 PPP4R2Q9NY27 417 aa22.42■■□□□ 1.18
SEMA4B-202ENST00000411539 CHIC2Q9UKJ5 165 aa22.38■■□□□ 1.17
SEMA4B-202ENST00000411539 TOP2AP11388 1531 aaKnown RBP22.36■■□□□ 1.17
SEMA4B-202ENST00000411539 NOP58Q9Y2X3 529 aaKnown RBP22.34■■□□□ 1.17
SEMA4B-202ENST00000411539 ARID3CA6NKF2 412 aa22.32■■□□□ 1.16
SEMA4B-202ENST00000411539 EIF4G2P78344 907 aaKnown RBP eCLIP22.32■■□□□ 1.16
SEMA4B-202ENST00000411539 SALL2Q9Y467 1007 aaPredicted RBP22.32■■□□□ 1.16
SEMA4B-202ENST00000411539 SETD5Q9C0A6 1442 aa22.31■■□□□ 1.16
SEMA4B-202ENST00000411539 PPP1R15AO75807 674 aaPredicted RBP22.3■■□□□ 1.16
SEMA4B-202ENST00000411539 RTN4Q9NQC3 1192 aaKnown RBP22.3■■□□□ 1.16
SEMA4B-202ENST00000411539 EIF5BO60841 1220 aaKnown RBP22.29■■□□□ 1.16
SEMA4B-202ENST00000411539 TIMELESSQ9UNS1 1208 aa22.26■■□□□ 1.15
SEMA4B-202ENST00000411539 RRP7BPQ9NSQ0 103 aa22.25■■□□□ 1.15
SEMA4B-202ENST00000411539 BAZ1BQ9UIG0 1483 aaKnown RBP22.24■■□□□ 1.15
SEMA4B-202ENST00000411539 KIF27Q86VH2 1401 aa22.21■■□□□ 1.15
SEMA4B-202ENST00000411539 FANCIQ9NVI1 1328 aa22.19■■□□□ 1.14
SEMA4B-202ENST00000411539 TMC1Q8TDI8 760 aa22.18■■□□□ 1.14
SEMA4B-202ENST00000411539 SMARCA2P51531 1590 aa22.18■■□□□ 1.14
SEMA4B-202ENST00000411539 SMARCA4P51532 1647 aa22.17■■□□□ 1.14
SEMA4B-202ENST00000411539 MTUS2Q5JR59 1369 aa22.17■■□□□ 1.14
SEMA4B-202ENST00000411539 MSH5O43196 834 aa22.16■■□□□ 1.14
SEMA4B-202ENST00000411539 LAS1LQ9Y4W2 734 aaKnown RBP22.15■■□□□ 1.14
SEMA4B-202ENST00000411539 KIF21BO75037 1637 aa22.15■■□□□ 1.14
SEMA4B-202ENST00000411539 HSPA5P11021 654 aaKnown RBP22.13■■□□□ 1.13
SEMA4B-202ENST00000411539 ERICH6BQ5W0A0 696 aa22.08■■□□□ 1.13
SEMA4B-202ENST00000411539 NEFMP07197 916 aa22.07■■□□□ 1.12
SEMA4B-202ENST00000411539 IPO9Q96P70 1041 aaKnown RBP21.95■■□□□ 1.1
SEMA4B-202ENST00000411539 FOXD1Q16676 465 aa21.95■■□□□ 1.1
SEMA4B-202ENST00000411539 SLC4A1APQ9BWU0 796 aaKnown RBP21.95■■□□□ 1.1
SEMA4B-202ENST00000411539 RRBP1Q9P2E9 1410 aaKnown RBP21.94■■□□□ 1.1
SEMA4B-202ENST00000411539 ZNF777Q9ULD5 760 aaPredicted RBP21.94■■□□□ 1.1
SEMA4B-202ENST00000411539 CARMIL1Q5VZK9 1371 aa21.93■■□□□ 1.1
SEMA4B-202ENST00000411539 ARAP1Q96P48 1450 aa21.93■■□□□ 1.1
SEMA4B-202ENST00000411539 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.93■■□□□ 1.1
SEMA4B-202ENST00000411539 FHAD1B1AJZ9 1412 aa21.91■■□□□ 1.1
SEMA4B-202ENST00000411539 SYNJ1O43426 1573 aa21.9■■□□□ 1.1
SEMA4B-202ENST00000411539 ATAD2BQ9ULI0 1458 aa21.9■■□□□ 1.1
SEMA4B-202ENST00000411539 KDM2AQ9Y2K7 1162 aa21.9■■□□□ 1.1
SEMA4B-202ENST00000411539 CUX2O14529 1486 aa21.89■■□□□ 1.1
SEMA4B-202ENST00000411539 WDR97A6NE52 1622 aa21.89■■□□□ 1.09
SEMA4B-202ENST00000411539 PAK3O75914 559 aaPredicted RBP21.89■■□□□ 1.09
SEMA4B-202ENST00000411539 ARHGAP35Q9NRY4 1499 aa21.88■■□□□ 1.09
SEMA4B-202ENST00000411539 PPM1GO15355 546 aaPredicted RBP21.87■■□□□ 1.09
SEMA4B-202ENST00000411539 PRKRIP1Q9H875 184 aaPredicted RBP21.87■■□□□ 1.09
SEMA4B-202ENST00000411539 PHLDB1Q86UU1 1377 aa21.86■■□□□ 1.09
SEMA4B-202ENST00000411539 ARXQ96QS3 562 aa21.85■■□□□ 1.09
SEMA4B-202ENST00000411539 L3MBTL2Q969R5 705 aa21.83■■□□□ 1.09
SEMA4B-202ENST00000411539 CCDC184Q52MB2 194 aa21.81■■□□□ 1.08
SEMA4B-202ENST00000411539 ANO8Q9HCE9 1232 aaPredicted RBP21.8■■□□□ 1.08
SEMA4B-202ENST00000411539 NUDCQ9Y266 331 aa21.8■■□□□ 1.08
SEMA4B-202ENST00000411539 ZBED9Q6R2W3 1325 aa21.79■■□□□ 1.08
SEMA4B-202ENST00000411539 DDRGK1Q96HY6 314 aa21.78■■□□□ 1.08
SEMA4B-202ENST00000411539 WASHC2AQ641Q2 1341 aa21.78■■□□□ 1.08
SEMA4B-202ENST00000411539 CANXP27824 592 aaKnown RBP21.74■■□□□ 1.07
SEMA4B-202ENST00000411539 MPHOSPH9Q99550 1183 aa21.74■■□□□ 1.07
SEMA4B-202ENST00000411539 FHOD3Q2V2M9 1422 aa21.73■■□□□ 1.07
SEMA4B-202ENST00000411539 EIF4G1Q04637 1599 aaKnown RBP21.71■■□□□ 1.07
SEMA4B-202ENST00000411539 IL27Q8NEV9 243 aa21.69■■□□□ 1.06
SEMA4B-202ENST00000411539 CARD11Q9BXL7 1154 aa21.69■■□□□ 1.06
SEMA4B-202ENST00000411539 PRKCSHP14314 528 aaPredicted RBP21.68■■□□□ 1.06
SEMA4B-202ENST00000411539 CCDC18Q5T9S5 1454 aa21.67■■□□□ 1.06
SEMA4B-202ENST00000411539 PRXQ9BXM0 1461 aa21.67■■□□□ 1.06
SEMA4B-202ENST00000411539 TCERG1O14776 1098 aaKnown RBP21.67■■□□□ 1.06
SEMA4B-202ENST00000411539 FMN1Q68DA7 1419 aa21.67■■□□□ 1.06
SEMA4B-202ENST00000411539 RGS3P49796 1198 aa21.67■■□□□ 1.06
SEMA4B-202ENST00000411539 LRRC9Q6ZRR7 1453 aa21.66■■□□□ 1.06
SEMA4B-202ENST00000411539 RCAN3Q9UKA8 241 aa21.66■■□□□ 1.06
SEMA4B-202ENST00000411539 PDE4AP27815 886 aa21.63■■□□□ 1.05
SEMA4B-202ENST00000411539 EXOC6Q8TAG9 804 aa21.63■■□□□ 1.05
SEMA4B-202ENST00000411539 SLC4A3P48751 1232 aa21.61■■□□□ 1.05
SEMA4B-202ENST00000411539 IGF1RP08069 1367 aa21.6■■□□□ 1.05
SEMA4B-202ENST00000411539 ERICH3Q5RHP9 1530 aa21.59■■□□□ 1.05
SEMA4B-202ENST00000411539 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.59■■□□□ 1.05
SEMA4B-202ENST00000411539 WDR43Q15061 677 aaKnown RBP eCLIP21.58■■□□□ 1.04
SEMA4B-202ENST00000411539 AKNAQ7Z591 1439 aa21.57■■□□□ 1.04
SEMA4B-202ENST00000411539 RGL3Q3MIN7 710 aa21.57■■□□□ 1.04
SEMA4B-202ENST00000411539 CCDC7Q96M83 1385 aa21.57■■□□□ 1.04
SEMA4B-202ENST00000411539 MAPKBP1O60336 1514 aa21.56■■□□□ 1.04
SEMA4B-202ENST00000411539 CC2D1BQ5T0F9 858 aaKnown RBP21.56■■□□□ 1.04
SEMA4B-202ENST00000411539 CNTLNQ9NXG0 1405 aa21.55■■□□□ 1.04
SEMA4B-202ENST00000411539 UACAQ9BZF9 1416 aa21.55■■□□□ 1.04
SEMA4B-202ENST00000411539 FBLN2P98095 1184 aa21.54■■□□□ 1.04
SEMA4B-202ENST00000411539 KIF7Q2M1P5 1343 aa21.54■■□□□ 1.04
SEMA4B-202ENST00000411539 UPF2Q9HAU5 1272 aaKnown RBP21.54■■□□□ 1.04
SEMA4B-202ENST00000411539 USP35Q9P2H5 1018 aa21.54■■□□□ 1.04
SEMA4B-202ENST00000411539 PLIN1O60240 522 aa21.53■■□□□ 1.04
SEMA4B-202ENST00000411539 FGD6Q6ZV73 1430 aa21.5■■□□□ 1.03
SEMA4B-202ENST00000411539 GLIPR1L2Q4G1C9 344 aa21.5■■□□□ 1.03
SEMA4B-202ENST00000411539 RRP1P56182 461 aaKnown RBP21.5■■□□□ 1.03
SEMA4B-202ENST00000411539 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.5■■□□□ 1.03
SEMA4B-202ENST00000411539 C11orf95C9JLR9 678 aaPredicted RBP21.49■■□□□ 1.03
SEMA4B-202ENST00000411539 GSE1Q14687 1217 aa21.48■■□□□ 1.03
SEMA4B-202ENST00000411539 DCAF11Q8TEB1 546 aa21.47■■□□□ 1.03
SEMA4B-202ENST00000411539 CFDP1Q9UEE9 299 aaPredicted RBP21.47■■□□□ 1.03
SEMA4B-202ENST00000411539 PKD2Q13563 968 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms