RNA–Protein interactions for RNA: ENST00000411028.1

RNU6-272P-201, Transcript of RNA, U6 small nuclear 272, pseudogene, humanhuman

BASIC

Gene RNU6-272P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-272P-201ENST00000411028 NBR1Q14596 966 aa9.27□□□□□ -0.93
RNU6-272P-201ENST00000411028 RIOK3O14730 519 aaKnown RBP9.26□□□□□ -0.93
RNU6-272P-201ENST00000411028 NKX1-1Q15270 411 aaPredicted RBP9.24□□□□□ -0.93
RNU6-272P-201ENST00000411028 DCAF8Q5TAQ9 597 aa9.24□□□□□ -0.93
RNU6-272P-201ENST00000411028 GTPBP6O43824 516 aaPredicted RBP9.22□□□□□ -0.93
RNU6-272P-201ENST00000411028 CHRM1P11229 460 aaPredicted RBP9.21□□□□□ -0.94
RNU6-272P-201ENST00000411028 SPDYE1Q8NFV5 336 aaPredicted RBP9.21□□□□□ -0.94
RNU6-272P-201ENST00000411028 VGFO15240 615 aaPredicted RBP9.2□□□□□ -0.94
RNU6-272P-201ENST00000411028 FAM212AQ96EL1 285 aa9.19□□□□□ -0.94
RNU6-272P-201ENST00000411028 SGIP1Q9BQI5 828 aa9.19□□□□□ -0.94
RNU6-272P-201ENST00000411028 STK25O00506 426 aa9.16□□□□□ -0.94
RNU6-272P-201ENST00000411028 MNX1P50219 401 aaPredicted RBP9.16□□□□□ -0.94
RNU6-272P-201ENST00000411028 CREBZFQ9NS37 354 aa9.16□□□□□ -0.94
RNU6-272P-201ENST00000411028 AKT1S1Q96B36 256 aa9.15□□□□□ -0.94
RNU6-272P-201ENST00000411028 RYDENQ9NUL5 291 aaKnown RBP9.14□□□□□ -0.95
RNU6-272P-201ENST00000411028 CACNB1Q02641 598 aaPredicted RBP9.13□□□□□ -0.95
RNU6-272P-201ENST00000411028 PRR29P0C7W0 189 aa9.12□□□□□ -0.95
RNU6-272P-201ENST00000411028 RBM42Q9BTD8 480 aaKnown RBP9.12□□□□□ -0.95
RNU6-272P-201ENST00000411028 RASEFQ8IZ41 740 aa9.09□□□□□ -0.95
RNU6-272P-201ENST00000411028 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.08□□□□□ -0.96
RNU6-272P-201ENST00000411028 ZFP91Q96JP5 570 aaPredicted RBP9.08□□□□□ -0.96
RNU6-272P-201ENST00000411028 BCL11BQ9C0K0 894 aaPredicted RBP9.08□□□□□ -0.96
RNU6-272P-201ENST00000411028 CLEC11AQ9Y240 323 aa9.08□□□□□ -0.96
RNU6-272P-201ENST00000411028 STK24Q9Y6E0 443 aa9.08□□□□□ -0.96
RNU6-272P-201ENST00000411028 REM2Q8IYK8 340 aaPredicted RBP9.04□□□□□ -0.96
RNU6-272P-201ENST00000411028 PYGBP11216 843 aa9.02□□□□□ -0.97
RNU6-272P-201ENST00000411028 P3H3Q8IVL6 736 aa9.02□□□□□ -0.97
RNU6-272P-201ENST00000411028 ZNF467Q7Z7K2 595 aaPredicted RBP8.95□□□□□ -0.98
RNU6-272P-201ENST00000411028 GTF3C3Q9Y5Q9 886 aa8.94□□□□□ -0.98
RNU6-272P-201ENST00000411028 WDR70Q9NW82 654 aa8.93□□□□□ -0.98
RNU6-272P-201ENST00000411028 TMEM132AQ24JP5 1023 aa8.92□□□□□ -0.98
RNU6-272P-201ENST00000411028 ERICH6Q7L0X2 663 aa8.92□□□□□ -0.98
RNU6-272P-201ENST00000411028 PITPNM1O00562 1244 aa8.91□□□□□ -0.98
RNU6-272P-201ENST00000411028 PDAP1Q13442 181 aaKnown RBP8.91□□□□□ -0.98
RNU6-272P-201ENST00000411028 CADPS2Q86UW7 1296 aa8.9□□□□□ -0.98
RNU6-272P-201ENST00000411028 TIMELESSQ9UNS1 1208 aa8.9□□□□□ -0.98
RNU6-272P-201ENST00000411028 TULP1O00294 542 aaPredicted RBP8.89□□□□□ -0.99
RNU6-272P-201ENST00000411028 KCNV2Q8TDN2 545 aa8.89□□□□□ -0.99
RNU6-272P-201ENST00000411028 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.88□□□□□ -0.99
RNU6-272P-201ENST00000411028 TSPYL2Q9H2G4 693 aaPredicted RBP8.86□□□□□ -0.99
RNU6-272P-201ENST00000411028 LMOD2Q6P5Q4 547 aa8.85□□□□□ -0.99
RNU6-272P-201ENST00000411028 ZNF579Q8NAF0 562 aaKnown RBP8.84□□□□□ -0.99
RNU6-272P-201ENST00000411028 MFRPQ9BY79 579 aa8.84□□□□□ -0.99
RNU6-272P-201ENST00000411028 PSEN1P49768 467 aa8.83□□□□□ -1
RNU6-272P-201ENST00000411028 PCDHB8Q9UN66 801 aa8.83□□□□□ -1
RNU6-272P-201ENST00000411028 PCDHB13Q9Y5F0 798 aa8.83□□□□□ -1
RNU6-272P-201ENST00000411028 ARHGEF1Q92888 912 aaKnown RBP8.82□□□□□ -1
RNU6-272P-201ENST00000411028 FARP1Q9Y4F1 1045 aaPredicted RBP8.82□□□□□ -1
RNU6-272P-201ENST00000411028 CHADLQ6NUI6 762 aa8.8□□□□□ -1
RNU6-272P-201ENST00000411028 CCDC61Q9Y6R9 512 aa8.8□□□□□ -1
RNU6-272P-201ENST00000411028 SOX12O15370 315 aa8.76□□□□□ -1.01
RNU6-272P-201ENST00000411028 NLRP6P59044 892 aa8.76□□□□□ -1.01
RNU6-272P-201ENST00000411028 E2F4Q16254 413 aa8.76□□□□□ -1.01
RNU6-272P-201ENST00000411028 PPP1R37O75864 691 aa8.75□□□□□ -1.01
RNU6-272P-201ENST00000411028 FBXO22Q8NEZ5 403 aa8.75□□□□□ -1.01
RNU6-272P-201ENST00000411028 EFCAB3Q8N7B9 438 aa8.73□□□□□ -1.01
RNU6-272P-201ENST00000411028 TESPA1A2RU30 521 aaPredicted RBP8.72□□□□□ -1.01
RNU6-272P-201ENST00000411028 BRPF1P55201 1214 aaPredicted RBP8.72□□□□□ -1.01
RNU6-272P-201ENST00000411028 ZC3H15Q8WU90 426 aaKnown RBP8.72□□□□□ -1.01
RNU6-272P-201ENST00000411028 IFNL1Q8IU54 200 aa8.71□□□□□ -1.02
RNU6-272P-201ENST00000411028 PAK3O75914 559 aaPredicted RBP8.7□□□□□ -1.02
RNU6-272P-201ENST00000411028 PRKAR2AP13861 404 aaKnown RBP8.69□□□□□ -1.02
RNU6-272P-201ENST00000411028 ARXQ96QS3 562 aa8.69□□□□□ -1.02
RNU6-272P-201ENST00000411028 CABP2Q9NPB3 220 aa8.69□□□□□ -1.02
RNU6-272P-201ENST00000411028 PHF8Q9UPP1 1060 aa8.69□□□□□ -1.02
RNU6-272P-201ENST00000411028 SEMA3EO15041 775 aa8.68□□□□□ -1.02
RNU6-272P-201ENST00000411028 KIF12Q96FN5 646 aa8.68□□□□□ -1.02
RNU6-272P-201ENST00000411028 MAP3K13O43283 966 aa8.67□□□□□ -1.02
RNU6-272P-201ENST00000411028 ARIH1Q9Y4X5 557 aaPredicted RBP8.67□□□□□ -1.02
RNU6-272P-201ENST00000411028 PDE4AP27815 886 aa8.66□□□□□ -1.02
RNU6-272P-201ENST00000411028 FXR2P51116 673 aaKnown RBP eCLIP8.66□□□□□ -1.02
RNU6-272P-201ENST00000411028 SMYD5Q6GMV2 418 aa8.66□□□□□ -1.02
RNU6-272P-201ENST00000411028 C14orf37Q86TY3 774 aa8.66□□□□□ -1.02
RNU6-272P-201ENST00000411028 NCKAP5LQ9HCH0 1330 aa8.65□□□□□ -1.02
RNU6-272P-201ENST00000411028 MFSD10Q14728 455 aa8.65□□□□□ -1.02
RNU6-272P-201ENST00000411028 NEUROD2Q15784 382 aa8.63□□□□□ -1.03
RNU6-272P-201ENST00000411028 LARP6Q9BRS8 491 aaKnown RBP8.63□□□□□ -1.03
RNU6-272P-201ENST00000411028 SLC24A3Q9HC58 644 aa8.63□□□□□ -1.03
RNU6-272P-201ENST00000411028 ZMYND10O75800 440 aa8.62□□□□□ -1.03
RNU6-272P-201ENST00000411028 CRISPLD2Q9H0B8 497 aa8.62□□□□□ -1.03
RNU6-272P-201ENST00000411028 CAMK2BQ13554 666 aa8.6□□□□□ -1.03
RNU6-272P-201ENST00000411028 MS4A4AQ96JQ5 239 aa8.6□□□□□ -1.03
RNU6-272P-201ENST00000411028 DDX27Q96GQ7 796 aaKnown RBP8.59□□□□□ -1.03
RNU6-272P-201ENST00000411028 BARGINQ6ZT62 677 aa8.57□□□□□ -1.04
RNU6-272P-201ENST00000411028 GOLGA2Q08379 1002 aa8.53□□□□□ -1.04
RNU6-272P-201ENST00000411028 DAXXQ9UER7 740 aaPredicted RBP8.53□□□□□ -1.04
RNU6-272P-201ENST00000411028 AK7Q96M32 723 aa8.52□□□□□ -1.05
RNU6-272P-201ENST00000411028 ZRANB1Q9UGI0 708 aa8.52□□□□□ -1.05
RNU6-272P-201ENST00000411028 HOMEZQ8IX15 550 aa8.51□□□□□ -1.05
RNU6-272P-201ENST00000411028 PIP4P2Q8N4L2 257 aa8.51□□□□□ -1.05
RNU6-272P-201ENST00000411028 TMEM106CQ9BVX2 250 aa8.5□□□□□ -1.05
RNU6-272P-201ENST00000411028 MKRN3Q13064 507 aaKnown RBP8.49□□□□□ -1.05
RNU6-272P-201ENST00000411028 CD44P16070 742 aaKnown RBP8.48□□□□□ -1.05
RNU6-272P-201ENST00000411028 CHRDL2Q6WN34 429 aa8.48□□□□□ -1.05
RNU6-272P-201ENST00000411028 ILDR1Q86SU0 546 aaPredicted RBP8.48□□□□□ -1.05
RNU6-272P-201ENST00000411028 GPIHBP1Q8IV16 184 aa8.48□□□□□ -1.05
RNU6-272P-201ENST00000411028 PHF12Q96QT6 1004 aa8.48□□□□□ -1.05
RNU6-272P-201ENST00000411028 PPP1R15BQ5SWA1 713 aa8.47□□□□□ -1.05
RNU6-272P-201ENST00000411028 GPHNQ9NQX3 736 aaPredicted RBP8.47□□□□□ -1.05
RNU6-272P-201ENST00000411028 MLLT3P42568 568 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms