RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 EIF4G2P78344 907 aaKnown RBP eCLIP12.25□□□□□ -0.45
PBRM1-208ENST00000410007 WDR43Q15061 677 aaKnown RBP eCLIP12.24□□□□□ -0.45
PBRM1-208ENST00000410007 CARMIL1Q5VZK9 1371 aa12.2□□□□□ -0.46
PBRM1-208ENST00000410007 ANP32AP39687 249 aaKnown RBP12.2□□□□□ -0.46
PBRM1-208ENST00000410007 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.2□□□□□ -0.46
PBRM1-208ENST00000410007 MRS2Q9HD23 443 aa12.2□□□□□ -0.46
PBRM1-208ENST00000410007 FHAD1B1AJZ9 1412 aa12.2□□□□□ -0.46
PBRM1-208ENST00000410007 CUX2O14529 1486 aa12.19□□□□□ -0.46
PBRM1-208ENST00000410007 ARID4BQ4LE39 1312 aaPredicted RBP12.19□□□□□ -0.46
PBRM1-208ENST00000410007 SALL2Q9Y467 1007 aaPredicted RBP12.18□□□□□ -0.46
PBRM1-208ENST00000410007 SMARCA2P51531 1590 aa12.18□□□□□ -0.46
PBRM1-208ENST00000410007 RGL3Q3MIN7 710 aa12.17□□□□□ -0.46
PBRM1-208ENST00000410007 PDS5BQ9NTI5 1447 aa12.17□□□□□ -0.46
PBRM1-208ENST00000410007 CDCA8Q53HL2 280 aa12.16□□□□□ -0.46
PBRM1-208ENST00000410007 FKBP8Q14318 412 aa12.16□□□□□ -0.46
PBRM1-208ENST00000410007 MYO15BQ96JP2 1530 aa12.16□□□□□ -0.46
PBRM1-208ENST00000410007 SCAF1Q9H7N4 1312 aaKnown RBP12.15□□□□□ -0.46
PBRM1-208ENST00000410007 CCNB3Q8WWL7 1395 aa12.15□□□□□ -0.46
PBRM1-208ENST00000410007 C14orf37Q86TY3 774 aa12.14□□□□□ -0.47
PBRM1-208ENST00000410007 UPF2Q9HAU5 1272 aaKnown RBP12.14□□□□□ -0.47
PBRM1-208ENST00000410007 MROH2BQ7Z745 1585 aa12.13□□□□□ -0.47
PBRM1-208ENST00000410007 CCDC88BA6NC98 1476 aa12.11□□□□□ -0.47
PBRM1-208ENST00000410007 EIF4G1Q04637 1599 aaKnown RBP12.11□□□□□ -0.47
PBRM1-208ENST00000410007 HIRIP3Q9BW71 556 aaPredicted RBP12.11□□□□□ -0.47
PBRM1-208ENST00000410007 NPM2Q86SE8 214 aaKnown RBP12.1□□□□□ -0.47
PBRM1-208ENST00000410007 SOGA1O94964 1423 aa12.09□□□□□ -0.47
PBRM1-208ENST00000410007 CFAP53Q96M91 514 aa12.08□□□□□ -0.47
PBRM1-208ENST00000410007 CARD11Q9BXL7 1154 aa12.08□□□□□ -0.47
PBRM1-208ENST00000410007 SENP3Q9H4L4 574 aaPredicted RBP12.08□□□□□ -0.47
PBRM1-208ENST00000410007 HSP90AA1P07900 732 aaKnown RBP12.08□□□□□ -0.48
PBRM1-208ENST00000410007 CCDC136Q96JN2 1154 aa12.08□□□□□ -0.48
PBRM1-208ENST00000410007 CARMIL2Q6F5E8 1435 aa12.08□□□□□ -0.48
PBRM1-208ENST00000410007 KNSTRNQ9Y448 316 aa12.07□□□□□ -0.48
PBRM1-208ENST00000410007 ZBTB7CA1YPR0 619 aa12.05□□□□□ -0.48
PBRM1-208ENST00000410007 KANK1Q14678 1352 aa12.05□□□□□ -0.48
PBRM1-208ENST00000410007 MYH16Q9H6N6 1097 aa12.04□□□□□ -0.48
PBRM1-208ENST00000410007 MIER1Q8N108 512 aa12.03□□□□□ -0.48
PBRM1-208ENST00000410007 POGKQ9P215 609 aa12.03□□□□□ -0.48
PBRM1-208ENST00000410007 A0A0G2JS52 829 aa12.03□□□□□ -0.48
PBRM1-208ENST00000410007 TDRD9Q8NDG6 1382 aaKnown RBP12.02□□□□□ -0.48
PBRM1-208ENST00000410007 HAP1P54257 671 aaPredicted RBP12.02□□□□□ -0.48
PBRM1-208ENST00000410007 CADPSQ9ULU8 1353 aa12.02□□□□□ -0.48
PBRM1-208ENST00000410007 HDGFP51858 240 aaKnown RBP12.01□□□□□ -0.49
PBRM1-208ENST00000410007 PLEKHG5O94827 1062 aa12.01□□□□□ -0.49
PBRM1-208ENST00000410007 TRHP20396 242 aaPredicted RBP12.01□□□□□ -0.49
PBRM1-208ENST00000410007 VPS8Q8N3P4 1428 aa12□□□□□ -0.49
PBRM1-208ENST00000410007 TOP2AP11388 1531 aaKnown RBP12□□□□□ -0.49
PBRM1-208ENST00000410007 FMN1Q68DA7 1419 aa11.99□□□□□ -0.49
PBRM1-208ENST00000410007 TIMELESSQ9UNS1 1208 aa11.99□□□□□ -0.49
PBRM1-208ENST00000410007 SIN3AQ96ST3 1273 aa11.98□□□□□ -0.49
PBRM1-208ENST00000410007 ARHGAP35Q9NRY4 1499 aa11.98□□□□□ -0.49
PBRM1-208ENST00000410007 NUDCQ9Y266 331 aa11.98□□□□□ -0.49
PBRM1-208ENST00000410007 ABCC8Q09428 1581 aa11.97□□□□□ -0.49
PBRM1-208ENST00000410007 ANP32BQ92688 251 aaKnown RBP11.97□□□□□ -0.49
PBRM1-208ENST00000410007 PPM1GO15355 546 aaPredicted RBP11.96□□□□□ -0.49
PBRM1-208ENST00000410007 EFCAB2Q5VUJ9 269 aa11.96□□□□□ -0.49
PBRM1-208ENST00000410007 DCAF11Q8TEB1 546 aa11.95□□□□□ -0.5
PBRM1-208ENST00000410007 MAPK8IP3Q9UPT6 1336 aa11.94□□□□□ -0.5
PBRM1-208ENST00000410007 ATAD2BQ9ULI0 1458 aa11.94□□□□□ -0.5
PBRM1-208ENST00000410007 MLECQ14165 292 aa11.94□□□□□ -0.5
PBRM1-208ENST00000410007 TMF1P82094 1093 aa11.93□□□□□ -0.5
PBRM1-208ENST00000410007 SETD5Q9C0A6 1442 aa11.92□□□□□ -0.5
PBRM1-208ENST00000410007 GGT6Q6P531 493 aa11.92□□□□□ -0.5
PBRM1-208ENST00000410007 LMOD2Q6P5Q4 547 aa11.92□□□□□ -0.5
PBRM1-208ENST00000410007 WIZO95785 1651 aa11.9□□□□□ -0.5
PBRM1-208ENST00000410007 RAPGEF2Q9Y4G8 1499 aa11.9□□□□□ -0.5
PBRM1-208ENST00000410007 PKD2Q13563 968 aa11.89□□□□□ -0.51
PBRM1-208ENST00000410007 IRX6P78412 446 aaPredicted RBP11.89□□□□□ -0.51
PBRM1-208ENST00000410007 KANK4Q5T7N3 995 aaPredicted RBP11.89□□□□□ -0.51
PBRM1-208ENST00000410007 PNNQ9H307 717 aaKnown RBP11.89□□□□□ -0.51
PBRM1-208ENST00000410007 ANKRD30AQ9BXX3 1397 aa11.88□□□□□ -0.51
PBRM1-208ENST00000410007 RSPH4AQ5TD94 716 aa11.87□□□□□ -0.51
PBRM1-208ENST00000410007 NEUROD2Q15784 382 aa11.87□□□□□ -0.51
PBRM1-208ENST00000410007 SRPK2P78362 688 aaKnown RBP11.86□□□□□ -0.51
PBRM1-208ENST00000410007 FTSJ3Q8IY81 847 aaKnown RBP11.86□□□□□ -0.51
PBRM1-208ENST00000410007 JPH4Q96JJ6 628 aa11.86□□□□□ -0.51
PBRM1-208ENST00000410007 SMARCA4P51532 1647 aa11.85□□□□□ -0.51
PBRM1-208ENST00000410007 CC2D1BQ5T0F9 858 aaKnown RBP11.85□□□□□ -0.51
PBRM1-208ENST00000410007 TNNT2P45379 298 aaPredicted RBP11.85□□□□□ -0.51
PBRM1-208ENST00000410007 NUP155O75694 1391 aa11.84□□□□□ -0.51
PBRM1-208ENST00000410007 U2SURPO15042 1029 aaKnown RBP11.84□□□□□ -0.51
PBRM1-208ENST00000410007 ARXQ96QS3 562 aa11.84□□□□□ -0.51
PBRM1-208ENST00000410007 CHMP4BQ9H444 224 aaKnown RBP11.84□□□□□ -0.51
PBRM1-208ENST00000410007 LAS1LQ9Y4W2 734 aaKnown RBP11.84□□□□□ -0.51
PBRM1-208ENST00000410007 EIF5BO60841 1220 aaKnown RBP11.83□□□□□ -0.52
PBRM1-208ENST00000410007 FANCD2Q9BXW9 1451 aa11.83□□□□□ -0.52
PBRM1-208ENST00000410007 CCDC18Q5T9S5 1454 aa11.82□□□□□ -0.52
PBRM1-208ENST00000410007 MS4A1P11836 297 aa11.82□□□□□ -0.52
PBRM1-208ENST00000410007 MPHOSPH9Q99550 1183 aa11.82□□□□□ -0.52
PBRM1-208ENST00000410007 FHOD3Q2V2M9 1422 aa11.82□□□□□ -0.52
PBRM1-208ENST00000410007 BECN1Q14457 450 aa11.81□□□□□ -0.52
PBRM1-208ENST00000410007 KIF3BO15066 747 aa11.81□□□□□ -0.52
PBRM1-208ENST00000410007 MORC1Q86VD1 984 aa11.81□□□□□ -0.52
PBRM1-208ENST00000410007 SPAG9O60271 1321 aaKnown RBP11.8□□□□□ -0.52
PBRM1-208ENST00000410007 HDGFL2Q7Z4V5 671 aaPredicted RBP11.79□□□□□ -0.52
PBRM1-208ENST00000410007 SENP3-EIF4A1A0A087X0R7 540 aa11.79□□□□□ -0.52
PBRM1-208ENST00000410007 SAFB2Q14151 953 aaKnown RBP eCLIP11.79□□□□□ -0.52
PBRM1-208ENST00000410007 DDRGK1Q96HY6 314 aa11.79□□□□□ -0.52
PBRM1-208ENST00000410007 RAB3GAP2Q9H2M9 1393 aa11.79□□□□□ -0.52
PBRM1-208ENST00000410007 CASC1Q6TDU7 716 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 211.9 ms