RNA–Protein interactions for RNA: ENST00000407144.6

CUEDC1-202, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUEDC1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-202ENST00000407144 CFTRP13569 1480 aa31.2■■■□□ 2.59
CUEDC1-202ENST00000407144 DDX10Q13206 875 aaKnown RBP31.18■■■□□ 2.58
CUEDC1-202ENST00000407144 TRIM52Q96A61 297 aa31.17■■■□□ 2.58
CUEDC1-202ENST00000407144 KIF21AQ7Z4S6 1674 aa31.13■■■□□ 2.57
CUEDC1-202ENST00000407144 ERCC6Q03468 1493 aa31.13■■■□□ 2.57
CUEDC1-202ENST00000407144 ANP32CO43423 234 aa31.09■■■□□ 2.57
CUEDC1-202ENST00000407144 NOP58Q9Y2X3 529 aaKnown RBP31.08■■■□□ 2.57
CUEDC1-202ENST00000407144 SALL2Q9Y467 1007 aaPredicted RBP31.08■■■□□ 2.57
CUEDC1-202ENST00000407144 MAPKBP1O60336 1514 aa31.06■■■□□ 2.56
CUEDC1-202ENST00000407144 PDS5BQ9NTI5 1447 aa31.05■■■□□ 2.56
CUEDC1-202ENST00000407144 UBE2Q2Q8WVN8 375 aa31.02■■■□□ 2.56
CUEDC1-202ENST00000407144 PRDM2Q13029 1718 aa31.02■■■□□ 2.56
CUEDC1-202ENST00000407144 PPP4R2Q9NY27 417 aa31.01■■■□□ 2.55
CUEDC1-202ENST00000407144 FANCD2Q9BXW9 1451 aa30.99■■■□□ 2.55
CUEDC1-202ENST00000407144 WDR97A6NE52 1622 aa30.98■■■□□ 2.55
CUEDC1-202ENST00000407144 TIMELESSQ9UNS1 1208 aa30.96■■■□□ 2.55
CUEDC1-202ENST00000407144 RAPGEF2Q9Y4G8 1499 aa30.93■■■□□ 2.54
CUEDC1-202ENST00000407144 CCNB3Q8WWL7 1395 aa30.9■■■□□ 2.54
CUEDC1-202ENST00000407144 THOC2Q8NI27 1593 aaKnown RBP30.89■■■□□ 2.54
CUEDC1-202ENST00000407144 NBR1Q14596 966 aa30.88■■■□□ 2.53
CUEDC1-202ENST00000407144 RAB3GAP2Q9H2M9 1393 aa30.84■■■□□ 2.53
CUEDC1-202ENST00000407144 RTL5Q5HYW3 569 aaPredicted RBP30.82■■■□□ 2.52
CUEDC1-202ENST00000407144 KANK4Q5T7N3 995 aaPredicted RBP30.82■■■□□ 2.52
CUEDC1-202ENST00000407144 ARAP1Q96P48 1450 aa30.81■■■□□ 2.52
CUEDC1-202ENST00000407144 PAK3O75914 559 aaPredicted RBP30.81■■■□□ 2.52
CUEDC1-202ENST00000407144 SYNJ1O43426 1573 aa30.79■■■□□ 2.52
CUEDC1-202ENST00000407144 IRX6P78412 446 aaPredicted RBP30.78■■■□□ 2.52
CUEDC1-202ENST00000407144 MRC2Q9UBG0 1479 aa30.76■■■□□ 2.51
CUEDC1-202ENST00000407144 HNRNPUQ00839 825 aaKnown RBP eCLIP30.73■■■□□ 2.51
CUEDC1-202ENST00000407144 IL27Q8NEV9 243 aa30.72■■■□□ 2.51
CUEDC1-202ENST00000407144 URB2Q14146 1524 aaKnown RBP30.71■■■□□ 2.51
CUEDC1-202ENST00000407144 CCDC136Q96JN2 1154 aa30.7■■■□□ 2.51
CUEDC1-202ENST00000407144 SETD5Q9C0A6 1442 aa30.69■■■□□ 2.5
CUEDC1-202ENST00000407144 IPO9Q96P70 1041 aaKnown RBP30.69■■■□□ 2.5
CUEDC1-202ENST00000407144 ERICH3Q5RHP9 1530 aa30.69■■■□□ 2.5
CUEDC1-202ENST00000407144 WDR62O43379 1518 aa30.68■■■□□ 2.5
CUEDC1-202ENST00000407144 WASHC2AQ641Q2 1341 aa30.66■■■□□ 2.5
CUEDC1-202ENST00000407144 ANP32AP39687 249 aaKnown RBP30.62■■■□□ 2.49
CUEDC1-202ENST00000407144 C11orf95C9JLR9 678 aaPredicted RBP30.62■■■□□ 2.49
CUEDC1-202ENST00000407144 SIN3AQ96ST3 1273 aa30.58■■■□□ 2.49
CUEDC1-202ENST00000407144 ZBTB47Q9UFB7 747 aaPredicted RBP30.58■■■□□ 2.49
CUEDC1-202ENST00000407144 B4GALNT3Q6L9W6 998 aa30.56■■■□□ 2.48
CUEDC1-202ENST00000407144 USP35Q9P2H5 1018 aa30.54■■■□□ 2.48
CUEDC1-202ENST00000407144 TOPBP1Q92547 1522 aa30.54■■■□□ 2.48
CUEDC1-202ENST00000407144 RANGAP1P46060 587 aaPredicted RBP30.51■■■□□ 2.48
CUEDC1-202ENST00000407144 DNMBPQ6XZF7 1577 aa30.49■■■□□ 2.47
CUEDC1-202ENST00000407144 PRXQ9BXM0 1461 aa30.49■■■□□ 2.47
CUEDC1-202ENST00000407144 WASHC2CQ9Y4E1 1318 aa30.49■■■□□ 2.47
CUEDC1-202ENST00000407144 HIRIP3Q9BW71 556 aaPredicted RBP30.48■■■□□ 2.47
CUEDC1-202ENST00000407144 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.48■■■□□ 2.47
CUEDC1-202ENST00000407144 CUX1P39880 1505 aa30.47■■■□□ 2.47
CUEDC1-202ENST00000407144 RTN4Q9NQC3 1192 aaKnown RBP30.47■■■□□ 2.47
CUEDC1-202ENST00000407144 MAP3K1Q13233 1512 aa30.44■■■□□ 2.46
CUEDC1-202ENST00000407144 ZBED9Q6R2W3 1325 aa30.38■■■□□ 2.45
CUEDC1-202ENST00000407144 FHAD1B1AJZ9 1412 aa30.33■■■□□ 2.45
CUEDC1-202ENST00000407144 POLA1P09884 1462 aaPredicted RBP30.32■■■□□ 2.44
CUEDC1-202ENST00000407144 TOP2BQ02880 1626 aa30.3■■■□□ 2.44
CUEDC1-202ENST00000407144 FGD5Q6ZNL6 1462 aa30.29■■■□□ 2.44
CUEDC1-202ENST00000407144 TONSLQ96HA7 1378 aa30.27■■■□□ 2.44
CUEDC1-202ENST00000407144 TIAM1Q13009 1591 aa30.26■■■□□ 2.43
CUEDC1-202ENST00000407144 ARHGAP35Q9NRY4 1499 aa30.25■■■□□ 2.43
CUEDC1-202ENST00000407144 BIVM-ERCC5R4GMW8 1640 aa30.24■■■□□ 2.43
CUEDC1-202ENST00000407144 RAD54L2Q9Y4B4 1467 aa30.24■■■□□ 2.43
CUEDC1-202ENST00000407144 PPM1GO15355 546 aaPredicted RBP30.22■■■□□ 2.43
CUEDC1-202ENST00000407144 NEFMP07197 916 aa30.22■■■□□ 2.43
CUEDC1-202ENST00000407144 RNF123Q5XPI4 1314 aa30.21■■■□□ 2.43
CUEDC1-202ENST00000407144 NCOA2Q15596 1464 aa30.21■■■□□ 2.43
CUEDC1-202ENST00000407144 TARBP1Q13395 1621 aaKnown RBP30.2■■■□□ 2.43
CUEDC1-202ENST00000407144 ZNF608Q9ULD9 1512 aaPredicted RBP30.19■■■□□ 2.42
CUEDC1-202ENST00000407144 IFT140Q96RY7 1462 aa30.18■■■□□ 2.42
CUEDC1-202ENST00000407144 SMG6Q86US8 1419 aaKnown RBP30.17■■■□□ 2.42
CUEDC1-202ENST00000407144 LRRC9Q6ZRR7 1453 aa30.14■■■□□ 2.42
CUEDC1-202ENST00000407144 CNTLNQ9NXG0 1405 aa30.14■■■□□ 2.42
CUEDC1-202ENST00000407144 PHLDB1Q86UU1 1377 aa30.11■■■□□ 2.41
CUEDC1-202ENST00000407144 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.11■■■□□ 2.41
CUEDC1-202ENST00000407144 RSPH6AQ9H0K4 717 aa30.11■■■□□ 2.41
CUEDC1-202ENST00000407144 EIF5BO60841 1220 aaKnown RBP30.07■■■□□ 2.4
CUEDC1-202ENST00000407144 CCDC184Q52MB2 194 aa30.07■■■□□ 2.4
CUEDC1-202ENST00000407144 PKNOX2Q96KN3 472 aa30.05■■■□□ 2.4
CUEDC1-202ENST00000407144 KDM5BQ9UGL1 1544 aa30.05■■■□□ 2.4
CUEDC1-202ENST00000407144 GSE1Q14687 1217 aa30.05■■■□□ 2.4
CUEDC1-202ENST00000407144 BRPF3Q9ULD4 1205 aa30.05■■■□□ 2.4
CUEDC1-202ENST00000407144 PRKRIP1Q9H875 184 aaPredicted RBP30.04■■■□□ 2.4
CUEDC1-202ENST00000407144 EIF4G3O43432 1585 aaKnown RBP30.04■■■□□ 2.4
CUEDC1-202ENST00000407144 AQRO60306 1485 aaKnown RBP eCLIP30.03■■■□□ 2.4
CUEDC1-202ENST00000407144 TDRD9Q8NDG6 1382 aaKnown RBP30.02■■■□□ 2.4
CUEDC1-202ENST00000407144 FAM9BQ8IZU0 186 aa30.01■■■□□ 2.4
CUEDC1-202ENST00000407144 LAS1LQ9Y4W2 734 aaKnown RBP30.01■■■□□ 2.39
CUEDC1-202ENST00000407144 FAM50AQ14320 339 aaKnown RBP30■■■□□ 2.39
CUEDC1-202ENST00000407144 TCERG1O14776 1098 aaKnown RBP30■■■□□ 2.39
CUEDC1-202ENST00000407144 MRS2Q9HD23 443 aa30■■■□□ 2.39
CUEDC1-202ENST00000407144 NUDCQ9Y266 331 aa29.99■■■□□ 2.39
CUEDC1-202ENST00000407144 AKNAQ7Z591 1439 aa29.98■■■□□ 2.39
CUEDC1-202ENST00000407144 UACAQ9BZF9 1416 aa29.97■■■□□ 2.39
CUEDC1-202ENST00000407144 ABCA10Q8WWZ4 1543 aa29.96■■■□□ 2.39
CUEDC1-202ENST00000407144 CFAP43Q8NDM7 1665 aa29.95■■■□□ 2.38
CUEDC1-202ENST00000407144 HSPA5P11021 654 aaKnown RBP29.94■■■□□ 2.38
CUEDC1-202ENST00000407144 FAM43AQ8N2R8 423 aa29.92■■■□□ 2.38
CUEDC1-202ENST00000407144 MS4A1P11836 297 aa29.91■■■□□ 2.38
CUEDC1-202ENST00000407144 KIF27Q86VH2 1401 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms