RNA–Protein interactions for RNA: ENST00000406902.5

GRAMD4-202, Transcript of GRAM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GRAMD4, Length 4,484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD4-202ENST00000406902 ARID3CA6NKF2 412 aa18.91■□□□□ 0.62
GRAMD4-202ENST00000406902 CDK11BP21127 795 aaKnown RBP18.9■□□□□ 0.62
GRAMD4-202ENST00000406902 CHMP7Q8WUX9 453 aaPredicted RBP18.89■□□□□ 0.61
GRAMD4-202ENST00000406902 PODXL2Q9NZ53 605 aa18.89■□□□□ 0.61
GRAMD4-202ENST00000406902 NCLP19338 710 aaKnown RBP18.88■□□□□ 0.61
GRAMD4-202ENST00000406902 BAZ1BQ9UIG0 1483 aaKnown RBP18.88■□□□□ 0.61
GRAMD4-202ENST00000406902 TRIM44Q96DX7 344 aaPredicted RBP18.87■□□□□ 0.61
GRAMD4-202ENST00000406902 DDX10Q13206 875 aaKnown RBP18.86■□□□□ 0.61
GRAMD4-202ENST00000406902 HSP90AA1P07900 732 aaKnown RBP18.84■□□□□ 0.61
GRAMD4-202ENST00000406902 LAS1LQ9Y4W2 734 aaKnown RBP18.84■□□□□ 0.61
GRAMD4-202ENST00000406902 DDRGK1Q96HY6 314 aa18.84■□□□□ 0.61
GRAMD4-202ENST00000406902 WIZO95785 1651 aa18.79■□□□□ 0.6
GRAMD4-202ENST00000406902 SMARCA4P51532 1647 aa18.79■□□□□ 0.6
GRAMD4-202ENST00000406902 RSPH6AQ9H0K4 717 aa18.78■□□□□ 0.6
GRAMD4-202ENST00000406902 CHGAP10645 457 aaKnown RBP18.74■□□□□ 0.59
GRAMD4-202ENST00000406902 SMARCA2P51531 1590 aa18.73■□□□□ 0.59
GRAMD4-202ENST00000406902 HSP90AA2PQ14568 343 aaPredicted RBP18.72■□□□□ 0.59
GRAMD4-202ENST00000406902 UPF2Q9HAU5 1272 aaKnown RBP18.72■□□□□ 0.59
GRAMD4-202ENST00000406902 TSPY4P0CV99 314 aa18.71■□□□□ 0.59
GRAMD4-202ENST00000406902 TSPY10P0CW01 314 aa18.71■□□□□ 0.59
GRAMD4-202ENST00000406902 PPP4R2Q9NY27 417 aa18.71■□□□□ 0.59
GRAMD4-202ENST00000406902 PLPPR3Q6T4P5 718 aa18.7■□□□□ 0.58
GRAMD4-202ENST00000406902 BICRAQ9NZM4 1560 aa18.7■□□□□ 0.58
GRAMD4-202ENST00000406902 SALL2Q9Y467 1007 aaPredicted RBP18.69■□□□□ 0.58
GRAMD4-202ENST00000406902 PNNQ9H307 717 aaKnown RBP18.69■□□□□ 0.58
GRAMD4-202ENST00000406902 FAM9BQ8IZU0 186 aa18.66■□□□□ 0.58
GRAMD4-202ENST00000406902 TOP2AP11388 1531 aaKnown RBP18.65■□□□□ 0.58
GRAMD4-202ENST00000406902 UNC13AQ9UPW8 1703 aa18.65■□□□□ 0.58
GRAMD4-202ENST00000406902 ATAD2BQ9ULI0 1458 aa18.65■□□□□ 0.58
GRAMD4-202ENST00000406902 A0A0U1RQG5 324 aaPredicted RBP18.65■□□□□ 0.58
GRAMD4-202ENST00000406902 AMER1Q5JTC6 1135 aaPredicted RBP18.63■□□□□ 0.57
GRAMD4-202ENST00000406902 ARID4BQ4LE39 1312 aaPredicted RBP18.62■□□□□ 0.57
GRAMD4-202ENST00000406902 CCDC88BA6NC98 1476 aa18.62■□□□□ 0.57
GRAMD4-202ENST00000406902 TIMELESSQ9UNS1 1208 aa18.62■□□□□ 0.57
GRAMD4-202ENST00000406902 L1TD1Q5T7N2 865 aaKnown RBP18.57■□□□□ 0.56
GRAMD4-202ENST00000406902 UBE2Q2Q8WVN8 375 aa18.57■□□□□ 0.56
GRAMD4-202ENST00000406902 BECN1Q14457 450 aa18.56■□□□□ 0.56
GRAMD4-202ENST00000406902 FANCIQ9NVI1 1328 aa18.54■□□□□ 0.56
GRAMD4-202ENST00000406902 PLEKHD1A6NEE1 506 aa18.54■□□□□ 0.56
GRAMD4-202ENST00000406902 ERCC6Q03468 1493 aa18.54■□□□□ 0.56
GRAMD4-202ENST00000406902 EIF4G1Q04637 1599 aaKnown RBP18.54■□□□□ 0.56
GRAMD4-202ENST00000406902 CANXP27824 592 aaKnown RBP18.53■□□□□ 0.56
GRAMD4-202ENST00000406902 B4GALNT3Q6L9W6 998 aa18.53■□□□□ 0.56
GRAMD4-202ENST00000406902 MTUS2Q5JR59 1369 aa18.5■□□□□ 0.55
GRAMD4-202ENST00000406902 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.49■□□□□ 0.556e-6■□□□□ 8.2
GRAMD4-202ENST00000406902 USP35Q9P2H5 1018 aa18.49■□□□□ 0.55
GRAMD4-202ENST00000406902 IPO9Q96P70 1041 aaKnown RBP18.47■□□□□ 0.55
GRAMD4-202ENST00000406902 DNTTIP2Q5QJE6 756 aaKnown RBP18.47■□□□□ 0.55
GRAMD4-202ENST00000406902 MRS2Q9HD23 443 aa18.46■□□□□ 0.55
GRAMD4-202ENST00000406902 WRNQ14191 1432 aaPredicted RBP eCLIP18.44■□□□□ 0.54
GRAMD4-202ENST00000406902 KCNH8Q96L42 1107 aa18.44■□□□□ 0.54
GRAMD4-202ENST00000406902 PPP1R15AO75807 674 aaPredicted RBP18.43■□□□□ 0.54
GRAMD4-202ENST00000406902 TONSLQ96HA7 1378 aa18.43■□□□□ 0.54
GRAMD4-202ENST00000406902 HIRIP3Q9BW71 556 aaPredicted RBP18.41■□□□□ 0.54
GRAMD4-202ENST00000406902 NCAPD3P42695 1498 aa18.4■□□□□ 0.54
GRAMD4-202ENST00000406902 C14orf37Q86TY3 774 aa18.38■□□□□ 0.53
GRAMD4-202ENST00000406902 IL27Q8NEV9 243 aa18.37■□□□□ 0.53
GRAMD4-202ENST00000406902 PTMAP06454 111 aaKnown RBP18.36■□□□□ 0.53
GRAMD4-202ENST00000406902 GOLGA6L22H0YM25 854 aa18.35■□□□□ 0.53
GRAMD4-202ENST00000406902 MSNP26038 577 aaKnown RBP18.35■□□□□ 0.53
GRAMD4-202ENST00000406902 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.35■□□□□ 0.53
GRAMD4-202ENST00000406902 TRHP20396 242 aaPredicted RBP18.34■□□□□ 0.53
GRAMD4-202ENST00000406902 GSE1Q14687 1217 aa18.34■□□□□ 0.53
GRAMD4-202ENST00000406902 ARID3AQ99856 593 aa18.33■□□□□ 0.53
GRAMD4-202ENST00000406902 CHIC2Q9UKJ5 165 aa18.33■□□□□ 0.52
GRAMD4-202ENST00000406902 EEA1Q15075 1411 aa18.31■□□□□ 0.52
GRAMD4-202ENST00000406902 ABCC8Q09428 1581 aa18.3■□□□□ 0.52
GRAMD4-202ENST00000406902 TMC1Q8TDI8 760 aa18.29■□□□□ 0.52
GRAMD4-202ENST00000406902 CADPSQ9ULU8 1353 aa18.27■□□□□ 0.52
GRAMD4-202ENST00000406902 CC2D2AQ9P2K1 1620 aa18.27■□□□□ 0.52
GRAMD4-202ENST00000406902 KIF27Q86VH2 1401 aa18.26■□□□□ 0.51
GRAMD4-202ENST00000406902 HAP1P54257 671 aaPredicted RBP18.26■□□□□ 0.51
GRAMD4-202ENST00000406902 TNNT3P45378 269 aaPredicted RBP18.25■□□□□ 0.51
GRAMD4-202ENST00000406902 HMGXB3Q12766 1538 aa18.23■□□□□ 0.51
GRAMD4-202ENST00000406902 CFDP1Q9UEE9 299 aaPredicted RBP18.22■□□□□ 0.51
GRAMD4-202ENST00000406902 A0A0G2JS52 829 aa18.21■□□□□ 0.51
GRAMD4-202ENST00000406902 CCER2I3L3R5 266 aa18.19■□□□□ 0.5
GRAMD4-202ENST00000406902 GOLGA6L3A6NEY3 463 aa18.19■□□□□ 0.5
GRAMD4-202ENST00000406902 CLIP1P30622 1438 aa18.18■□□□□ 0.5
GRAMD4-202ENST00000406902 PEG3Q9GZU2 1588 aa18.18■□□□□ 0.5
GRAMD4-202ENST00000406902 HDGFP51858 240 aaKnown RBP18.16■□□□□ 0.5
GRAMD4-202ENST00000406902 PDE4CQ08493 712 aa18.15■□□□□ 0.5
GRAMD4-202ENST00000406902 PDS5BQ9NTI5 1447 aa18.15■□□□□ 0.5
GRAMD4-202ENST00000406902 KDM2AQ9Y2K7 1162 aa18.15■□□□□ 0.5
GRAMD4-202ENST00000406902 MYH16Q9H6N6 1097 aa18.15■□□□□ 0.5
GRAMD4-202ENST00000406902 SENP3-EIF4A1A0A087X0R7 540 aa18.14■□□□□ 0.49
GRAMD4-202ENST00000406902 TCERG1O14776 1098 aaKnown RBP18.14■□□□□ 0.49
GRAMD4-202ENST00000406902 CHAF1AQ13111 956 aaPredicted RBP18.14■□□□□ 0.49
GRAMD4-202ENST00000406902 BRPF3Q9ULD4 1205 aa18.12■□□□□ 0.49
GRAMD4-202ENST00000406902 ZMYND15Q9H091 742 aa18.12■□□□□ 0.49
GRAMD4-202ENST00000406902 GZF1Q9H116 711 aaPredicted RBP18.12■□□□□ 0.49
GRAMD4-202ENST00000406902 SOGA1O94964 1423 aa18.11■□□□□ 0.49
GRAMD4-202ENST00000406902 CDCA8Q53HL2 280 aa18.11■□□□□ 0.49
GRAMD4-202ENST00000406902 WDR43Q15061 677 aaKnown RBP eCLIP18.1■□□□□ 0.49
GRAMD4-202ENST00000406902 RGS3P49796 1198 aa18.09■□□□□ 0.49
GRAMD4-202ENST00000406902 RRP9O43818 475 aaKnown RBP18.08■□□□□ 0.48
GRAMD4-202ENST00000406902 PTMSP20962 102 aa18.07■□□□□ 0.48
GRAMD4-202ENST00000406902 FAM43AQ8N2R8 423 aa18.05■□□□□ 0.48
GRAMD4-202ENST00000406902 GOLGA3Q08378 1498 aa18.05■□□□□ 0.48
GRAMD4-202ENST00000406902 FANCD2Q9BXW9 1451 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms