RNA–Protein interactions for RNA: ENST00000401088.8

SZRD1-201, Transcript of SUZ RNA binding domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SZRD1, Length 3,636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SZRD1-201ENST00000401088 PABPN1Q86U42 306 aaKnown RBP eCLIP16.85■□□□□ 0.29
SZRD1-201ENST00000401088 MROH2BQ7Z745 1585 aa16.84■□□□□ 0.29
SZRD1-201ENST00000401088 FAM50AQ14320 339 aaKnown RBP16.82■□□□□ 0.28
SZRD1-201ENST00000401088 CNGB1Q14028 1251 aaPredicted RBP16.81■□□□□ 0.28
SZRD1-201ENST00000401088 FAM9BQ8IZU0 186 aa16.81■□□□□ 0.28
SZRD1-201ENST00000401088 ATP1B4Q9UN42 357 aaPredicted RBP16.79■□□□□ 0.28
SZRD1-201ENST00000401088 KANK4Q5T7N3 995 aaPredicted RBP16.79■□□□□ 0.28
SZRD1-201ENST00000401088 LAS1LQ9Y4W2 734 aaKnown RBP16.78■□□□□ 0.28
SZRD1-201ENST00000401088 NEFMP07197 916 aa16.78■□□□□ 0.28
SZRD1-201ENST00000401088 PPP1R15AO75807 674 aaPredicted RBP16.77■□□□□ 0.28
SZRD1-201ENST00000401088 CEP164Q9UPV0 1460 aa16.77■□□□□ 0.27
SZRD1-201ENST00000401088 IPO9Q96P70 1041 aaKnown RBP16.76■□□□□ 0.27
SZRD1-201ENST00000401088 WIZO95785 1651 aa16.73■□□□□ 0.27
SZRD1-201ENST00000401088 DAXXQ9UER7 740 aaPredicted RBP16.72■□□□□ 0.27
SZRD1-201ENST00000401088 UBE2Q2Q8WVN8 375 aa16.71■□□□□ 0.27
SZRD1-201ENST00000401088 CCNB3Q8WWL7 1395 aa16.68■□□□□ 0.26
SZRD1-201ENST00000401088 TONSLQ96HA7 1378 aa16.68■□□□□ 0.26
SZRD1-201ENST00000401088 RAB3GAP2Q9H2M9 1393 aa16.68■□□□□ 0.26
SZRD1-201ENST00000401088 MRS2Q9HD23 443 aa16.67■□□□□ 0.26
SZRD1-201ENST00000401088 POLR3GLQ9BT43 218 aa16.6■□□□□ 0.25
SZRD1-201ENST00000401088 SENP3-EIF4A1A0A087X0R7 540 aa16.59■□□□□ 0.25
SZRD1-201ENST00000401088 PPM1GO15355 546 aaPredicted RBP16.59■□□□□ 0.25
SZRD1-201ENST00000401088 GLIPR1L2Q4G1C9 344 aa16.58■□□□□ 0.25
SZRD1-201ENST00000401088 TIMELESSQ9UNS1 1208 aa16.57■□□□□ 0.24
SZRD1-201ENST00000401088 BRPF3Q9ULD4 1205 aa16.57■□□□□ 0.24
SZRD1-201ENST00000401088 BAZ1BQ9UIG0 1483 aaKnown RBP16.56■□□□□ 0.24
SZRD1-201ENST00000401088 RAPGEF2Q9Y4G8 1499 aa16.54■□□□□ 0.24
SZRD1-201ENST00000401088 SETD5Q9C0A6 1442 aa16.53■□□□□ 0.24
SZRD1-201ENST00000401088 USP35Q9P2H5 1018 aa16.53■□□□□ 0.24
SZRD1-201ENST00000401088 WDR97A6NE52 1622 aa16.53■□□□□ 0.24
SZRD1-201ENST00000401088 BAZ1AQ9NRL2 1556 aaPredicted RBP16.49■□□□□ 0.23
SZRD1-201ENST00000401088 PKNOX2Q96KN3 472 aa16.49■□□□□ 0.23
SZRD1-201ENST00000401088 KIF21BO75037 1637 aa16.49■□□□□ 0.23
SZRD1-201ENST00000401088 SMARCA4P51532 1647 aa16.48■□□□□ 0.23
SZRD1-201ENST00000401088 GSE1Q14687 1217 aa16.47■□□□□ 0.23
SZRD1-201ENST00000401088 RRBP1Q9P2E9 1410 aaKnown RBP16.44■□□□□ 0.22
SZRD1-201ENST00000401088 EIF4G2P78344 907 aaKnown RBP eCLIP16.44■□□□□ 0.22
SZRD1-201ENST00000401088 CCDC184Q52MB2 194 aa16.44■□□□□ 0.22
SZRD1-201ENST00000401088 RSPH6AQ9H0K4 717 aa16.42■□□□□ 0.22
SZRD1-201ENST00000401088 ZBED9Q6R2W3 1325 aa16.42■□□□□ 0.22
SZRD1-201ENST00000401088 HSPA5P11021 654 aaKnown RBP16.41■□□□□ 0.22
SZRD1-201ENST00000401088 DDRGK1Q96HY6 314 aa16.4■□□□□ 0.22
SZRD1-201ENST00000401088 WASHC2AQ641Q2 1341 aa16.38■□□□□ 0.21
SZRD1-201ENST00000401088 P3H3Q8IVL6 736 aa16.38■□□□□ 0.21
SZRD1-201ENST00000401088 PDE4AP27815 886 aa16.38■□□□□ 0.21
SZRD1-201ENST00000401088 VSIG10Q8N0Z9 540 aa16.38■□□□□ 0.21
SZRD1-201ENST00000401088 ARXQ96QS3 562 aa16.37■□□□□ 0.21
SZRD1-201ENST00000401088 TOP2AP11388 1531 aaKnown RBP16.37■□□□□ 0.21
SZRD1-201ENST00000401088 TCERG1O14776 1098 aaKnown RBP16.36■□□□□ 0.21
SZRD1-201ENST00000401088 NUDCQ9Y266 331 aa16.36■□□□□ 0.21
SZRD1-201ENST00000401088 EIF4G1Q04637 1599 aaKnown RBP16.35■□□□□ 0.21
SZRD1-201ENST00000401088 PRKRIP1Q9H875 184 aaPredicted RBP16.35■□□□□ 0.21
SZRD1-201ENST00000401088 SLC4A3P48751 1232 aa16.34■□□□□ 0.21
SZRD1-201ENST00000401088 FRAT1Q92837 279 aaPredicted RBP16.34■□□□□ 0.21
SZRD1-201ENST00000401088 MAPKBP1O60336 1514 aa16.34■□□□□ 0.21
SZRD1-201ENST00000401088 C11orf95C9JLR9 678 aaPredicted RBP16.34■□□□□ 0.21
SZRD1-201ENST00000401088 AKNAQ7Z591 1439 aa16.32■□□□□ 0.2
SZRD1-201ENST00000401088 NFKBIBQ15653 356 aa16.32■□□□□ 0.2
SZRD1-201ENST00000401088 NAP1L5Q96NT1 182 aaPredicted RBP16.31■□□□□ 0.2
SZRD1-201ENST00000401088 TMC1Q8TDI8 760 aa16.31■□□□□ 0.2
SZRD1-201ENST00000401088 SMARCA2P51531 1590 aa16.3■□□□□ 0.2
SZRD1-201ENST00000401088 WASHC2CQ9Y4E1 1318 aa16.28■□□□□ 0.2
SZRD1-201ENST00000401088 CUX2O14529 1486 aa16.27■□□□□ 0.2
SZRD1-201ENST00000401088 ARAP1Q96P48 1450 aa16.26■□□□□ 0.19
SZRD1-201ENST00000401088 EXOC6Q8TAG9 804 aa16.25■□□□□ 0.19
SZRD1-201ENST00000401088 PEG3Q9GZU2 1588 aa16.24■□□□□ 0.19
SZRD1-201ENST00000401088 ZNF326Q5BKZ1 582 aaKnown RBP16.24■□□□□ 0.19
SZRD1-201ENST00000401088 ATAD2BQ9ULI0 1458 aa16.22■□□□□ 0.19
SZRD1-201ENST00000401088 FAM43AQ8N2R8 423 aa16.22■□□□□ 0.19
SZRD1-201ENST00000401088 BACH2Q9BYV9 841 aa16.22■□□□□ 0.19
SZRD1-201ENST00000401088 HSP90AA2PQ14568 343 aaPredicted RBP16.2■□□□□ 0.18
SZRD1-201ENST00000401088 CHIC2Q9UKJ5 165 aa16.19■□□□□ 0.18
SZRD1-201ENST00000401088 HSP90AA1P07900 732 aaKnown RBP16.18■□□□□ 0.18
SZRD1-201ENST00000401088 ZMYND15Q9H091 742 aa16.18■□□□□ 0.18
SZRD1-201ENST00000401088 PHLDB1Q86UU1 1377 aa16.18■□□□□ 0.18
SZRD1-201ENST00000401088 MS4A1P11836 297 aa16.18■□□□□ 0.18
SZRD1-201ENST00000401088 CNTLNQ9NXG0 1405 aa16.17■□□□□ 0.18
SZRD1-201ENST00000401088 PNNQ9H307 717 aaKnown RBP16.17■□□□□ 0.18
SZRD1-201ENST00000401088 FRAT2O75474 233 aaPredicted RBP16.17■□□□□ 0.18
SZRD1-201ENST00000401088 SYNJ1O43426 1573 aa16.16■□□□□ 0.18
SZRD1-201ENST00000401088 RRP7BPQ9NSQ0 103 aa16.16■□□□□ 0.18
SZRD1-201ENST00000401088 RCAN3Q9UKA8 241 aa16.16■□□□□ 0.18
SZRD1-201ENST00000401088 SMG6Q86US8 1419 aaKnown RBP16.15■□□□□ 0.18
SZRD1-201ENST00000401088 RRP1P56182 461 aaKnown RBP16.14■□□□□ 0.17
SZRD1-201ENST00000401088 FHAD1B1AJZ9 1412 aa16.14■□□□□ 0.17
SZRD1-201ENST00000401088 ARID4BQ4LE39 1312 aaPredicted RBP16.14■□□□□ 0.17
SZRD1-201ENST00000401088 CC2D2AQ9P2K1 1620 aa16.14■□□□□ 0.17
SZRD1-201ENST00000401088 RGS3P49796 1198 aa16.11■□□□□ 0.17
SZRD1-201ENST00000401088 SKAP1Q86WV1 359 aa16.11■□□□□ 0.17
SZRD1-201ENST00000401088 CCDC7Q96M83 1385 aa16.1■□□□□ 0.17
SZRD1-201ENST00000401088 L3MBTL2Q969R5 705 aa16.1■□□□□ 0.17
SZRD1-201ENST00000401088 L1TD1Q5T7N2 865 aaKnown RBP16.09■□□□□ 0.17
SZRD1-201ENST00000401088 PODXL2Q9NZ53 605 aa16.09■□□□□ 0.17
SZRD1-201ENST00000401088 KIF27Q86VH2 1401 aa16.08■□□□□ 0.16
SZRD1-201ENST00000401088 PLIN1O60240 522 aa16.07■□□□□ 0.16
SZRD1-201ENST00000401088 FOXD1Q16676 465 aa16.07■□□□□ 0.16
SZRD1-201ENST00000401088 SLKQ9H2G2 1235 aaPredicted RBP16.05■□□□□ 0.16
SZRD1-201ENST00000401088 NCAPD3P42695 1498 aa16.05■□□□□ 0.16
SZRD1-201ENST00000401088 ARHGAP35Q9NRY4 1499 aa16.05■□□□□ 0.16
SZRD1-201ENST00000401088 CCDC18Q5T9S5 1454 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms