RNA–Protein interactions for RNA: ENST00000401088.8

SZRD1-201, Transcript of SUZ RNA binding domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SZRD1, Length 3,636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SZRD1-201ENST00000401088 NISCHQ9Y2I1 1504 aa21.45■■□□□ 1.02
SZRD1-201ENST00000401088 HRCP23327 699 aa20.59■□□□□ 0.89
SZRD1-201ENST00000401088 PELP1Q8IZL8 1130 aaKnown RBP20.49■□□□□ 0.87
SZRD1-201ENST00000401088 PCGF6Q9BYE7 350 aa20.36■□□□□ 0.85
SZRD1-201ENST00000401088 PPARGC1BQ86YN6 1023 aaKnown RBP20.29■□□□□ 0.84
SZRD1-201ENST00000401088 SUPT5HO00267 1087 aaKnown RBP20.25■□□□□ 0.83
SZRD1-201ENST00000401088 SHROOM4Q9ULL8 1493 aa20.03■□□□□ 0.8
SZRD1-201ENST00000401088 MYT1Q01538 1121 aa19.83■□□□□ 0.77
SZRD1-201ENST00000401088 SCAF1Q9H7N4 1312 aaKnown RBP19.61■□□□□ 0.73
SZRD1-201ENST00000401088 CHIC1Q5VXU3 224 aa19.56■□□□□ 0.72
SZRD1-201ENST00000401088 ZEB1P37275 1124 aaPredicted RBP19.48■□□□□ 0.71
SZRD1-201ENST00000401088 TRIM26Q12899 539 aaPredicted RBP19.44■□□□□ 0.7
SZRD1-201ENST00000401088 MYO15BQ96JP2 1530 aa19.37■□□□□ 0.69
SZRD1-201ENST00000401088 LOC105371045A0A1W2PR82 267 aa19.34■□□□□ 0.69
SZRD1-201ENST00000401088 CENPBP07199 599 aaPredicted RBP19.23■□□□□ 0.67
SZRD1-201ENST00000401088 GTF3C3Q9Y5Q9 886 aa19.17■□□□□ 0.66
SZRD1-201ENST00000401088 ACIN1Q9UKV3 1341 aaKnown RBP19.17■□□□□ 0.66
SZRD1-201ENST00000401088 DCAF8L2P0C7V8 631 aa19.12■□□□□ 0.65
SZRD1-201ENST00000401088 NEUROD1Q13562 356 aa19.08■□□□□ 0.65
SZRD1-201ENST00000401088 DCAF1Q9Y4B6 1507 aa19.08■□□□□ 0.65
SZRD1-201ENST00000401088 EHMT2Q96KQ7 1210 aa18.98■□□□□ 0.63
SZRD1-201ENST00000401088 CCER1Q8TC90 406 aaPredicted RBP18.89■□□□□ 0.61
SZRD1-201ENST00000401088 YTHDC1Q96MU7 727 aaKnown RBP18.88■□□□□ 0.61
SZRD1-201ENST00000401088 DIEXFQ68CQ4 756 aaKnown RBP18.85■□□□□ 0.61
SZRD1-201ENST00000401088 FAM9AQ8IZU1 332 aaPredicted RBP18.84■□□□□ 0.61
SZRD1-201ENST00000401088 CCDC180Q9P1Z9 1646 aa18.76■□□□□ 0.59
SZRD1-201ENST00000401088 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.75■□□□□ 0.59
SZRD1-201ENST00000401088 TRIM41Q8WV44 630 aa18.59■□□□□ 0.57
SZRD1-201ENST00000401088 TTBK1Q5TCY1 1321 aaPredicted RBP18.55■□□□□ 0.56
SZRD1-201ENST00000401088 BCL11AQ9H165 835 aa18.41■□□□□ 0.54
SZRD1-201ENST00000401088 ZNF316A6NFI3 1004 aaPredicted RBP18.33■□□□□ 0.53
SZRD1-201ENST00000401088 ANP32EQ9BTT0 268 aa18.25■□□□□ 0.51
SZRD1-201ENST00000401088 MIER1Q8N108 512 aa18.22■□□□□ 0.51
SZRD1-201ENST00000401088 ZCCHC6Q5VYS8 1495 aaKnown RBP18.19■□□□□ 0.5
SZRD1-201ENST00000401088 CSRNP3Q8WYN3 585 aa18.05■□□□□ 0.48
SZRD1-201ENST00000401088 BCANQ96GW7 911 aa18.02■□□□□ 0.47
SZRD1-201ENST00000401088 SUPT16HQ9Y5B9 1047 aaKnown RBP18.01■□□□□ 0.47
SZRD1-201ENST00000401088 ERICH6Q7L0X2 663 aa17.97■□□□□ 0.47
SZRD1-201ENST00000401088 TSHZ2Q9NRE2 1034 aa17.97■□□□□ 0.47
SZRD1-201ENST00000401088 HNRNPUL2Q1KMD3 747 aaKnown RBP17.95■□□□□ 0.46
SZRD1-201ENST00000401088 CLSPNQ9HAW4 1339 aa17.94■□□□□ 0.46
SZRD1-201ENST00000401088 NEFLP07196 543 aa17.85■□□□□ 0.45
SZRD1-201ENST00000401088 ABCC9O60706 1549 aa17.85■□□□□ 0.45
SZRD1-201ENST00000401088 UBTFP17480 764 aaKnown RBP17.79■□□□□ 0.44
SZRD1-201ENST00000401088 FKBP8Q14318 412 aa17.74■□□□□ 0.43
SZRD1-201ENST00000401088 APLP2Q06481 763 aa17.73■□□□□ 0.43
SZRD1-201ENST00000401088 PRKCSHP14314 528 aaPredicted RBP17.72■□□□□ 0.43
SZRD1-201ENST00000401088 RBM19Q9Y4C8 960 aaKnown RBP17.64■□□□□ 0.41
SZRD1-201ENST00000401088 ITGAEP38570 1179 aa17.61■□□□□ 0.41
SZRD1-201ENST00000401088 RANGAP1P46060 587 aaPredicted RBP17.57■□□□□ 0.4
SZRD1-201ENST00000401088 RSF1Q96T23 1441 aaPredicted RBP17.52■□□□□ 0.4
SZRD1-201ENST00000401088 CDK11AQ9UQ88 783 aaPredicted RBP17.46■□□□□ 0.39
SZRD1-201ENST00000401088 CEP162Q5TB80 1403 aa17.44■□□□□ 0.38
SZRD1-201ENST00000401088 TRIM52Q96A61 297 aa17.4■□□□□ 0.38
SZRD1-201ENST00000401088 KCNH8Q96L42 1107 aa17.4■□□□□ 0.38
SZRD1-201ENST00000401088 MYT1LQ9UL68 1186 aa17.39■□□□□ 0.37
SZRD1-201ENST00000401088 DEKP35659 375 aaKnown RBP17.38■□□□□ 0.37
SZRD1-201ENST00000401088 RB1CC1Q8TDY2 1594 aa17.37■□□□□ 0.37
SZRD1-201ENST00000401088 NBR1Q14596 966 aa17.34■□□□□ 0.37
SZRD1-201ENST00000401088 NACADO15069 1562 aa17.34■□□□□ 0.37
SZRD1-201ENST00000401088 DDX10Q13206 875 aaKnown RBP17.33■□□□□ 0.36
SZRD1-201ENST00000401088 WRNQ14191 1432 aaPredicted RBP eCLIP17.31■□□□□ 0.369e-6■■■■■ 50.1
SZRD1-201ENST00000401088 RTL5Q5HYW3 569 aaPredicted RBP17.3■□□□□ 0.36
SZRD1-201ENST00000401088 MSH5O43196 834 aa17.29■□□□□ 0.36
SZRD1-201ENST00000401088 IRX6P78412 446 aaPredicted RBP17.28■□□□□ 0.36
SZRD1-201ENST00000401088 ANO8Q9HCE9 1232 aaPredicted RBP17.27■□□□□ 0.36
SZRD1-201ENST00000401088 SCRIBQ14160 1630 aa17.26■□□□□ 0.35
SZRD1-201ENST00000401088 TNIKQ9UKE5 1360 aa17.23■□□□□ 0.35
SZRD1-201ENST00000401088 ANP32CO43423 234 aa17.23■□□□□ 0.35
SZRD1-201ENST00000401088 FANCIQ9NVI1 1328 aa17.17■□□□□ 0.34
SZRD1-201ENST00000401088 RTN4Q9NQC3 1192 aaKnown RBP17.17■□□□□ 0.34
SZRD1-201ENST00000401088 CCDC136Q96JN2 1154 aa17.15■□□□□ 0.34
SZRD1-201ENST00000401088 UNC13AQ9UPW8 1703 aa17.13■□□□□ 0.33
SZRD1-201ENST00000401088 HIRIP3Q9BW71 556 aaPredicted RBP17.12■□□□□ 0.33
SZRD1-201ENST00000401088 HNRNPUQ00839 825 aaKnown RBP eCLIP17.11■□□□□ 0.33
SZRD1-201ENST00000401088 EIF5BO60841 1220 aaKnown RBP17.08■□□□□ 0.33
SZRD1-201ENST00000401088 SOGA1O94964 1423 aa17.08■□□□□ 0.32
SZRD1-201ENST00000401088 SALL2Q9Y467 1007 aaPredicted RBP17.08■□□□□ 0.32
SZRD1-201ENST00000401088 NOP58Q9Y2X3 529 aaKnown RBP17.07■□□□□ 0.32
SZRD1-201ENST00000401088 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.06■□□□□ 0.32
SZRD1-201ENST00000401088 DHX57Q6P158 1386 aaKnown RBP17.04■□□□□ 0.32
SZRD1-201ENST00000401088 ANP32AP39687 249 aaKnown RBP17.03■□□□□ 0.32
SZRD1-201ENST00000401088 CLIP1P30622 1438 aa17.02■□□□□ 0.32
SZRD1-201ENST00000401088 CCDC88BA6NC98 1476 aa17.02■□□□□ 0.32
SZRD1-201ENST00000401088 GOLGA3Q08378 1498 aa16.99■□□□□ 0.31
SZRD1-201ENST00000401088 ERICH6BQ5W0A0 696 aa16.99■□□□□ 0.31
SZRD1-201ENST00000401088 ZBTB47Q9UFB7 747 aaPredicted RBP16.98■□□□□ 0.31
SZRD1-201ENST00000401088 B4GALNT3Q6L9W6 998 aa16.96■□□□□ 0.31
SZRD1-201ENST00000401088 PPP4R2Q9NY27 417 aa16.95■□□□□ 0.3
SZRD1-201ENST00000401088 CECR2Q9BXF3 1484 aa16.94■□□□□ 0.3
SZRD1-201ENST00000401088 CCER2I3L3R5 266 aa16.94■□□□□ 0.3
SZRD1-201ENST00000401088 ABCC8Q09428 1581 aa16.93■□□□□ 0.3
SZRD1-201ENST00000401088 EEA1Q15075 1411 aa16.92■□□□□ 0.3
SZRD1-201ENST00000401088 IL27Q8NEV9 243 aa16.91■□□□□ 0.3
SZRD1-201ENST00000401088 BICRAQ9NZM4 1560 aa16.9■□□□□ 0.3
SZRD1-201ENST00000401088 NPM2Q86SE8 214 aaKnown RBP16.9■□□□□ 0.3
SZRD1-201ENST00000401088 SIN3AQ96ST3 1273 aa16.88■□□□□ 0.29
SZRD1-201ENST00000401088 VPS8Q8N3P4 1428 aa16.87■□□□□ 0.29
SZRD1-201ENST00000401088 PAK3O75914 559 aaPredicted RBP16.87■□□□□ 0.29
SZRD1-201ENST00000401088 RUSC2Q8N2Y8 1516 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms