RNA–Protein interactions for RNA: ENST00000400248.6

DEPDC5-205, Transcript of DEP domain containing 5, humanhuman

TSL 1 (best) BASIC

Gene DEPDC5, Length 5,307 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC5-205ENST00000400248 HSP90AA1P07900 732 aaKnown RBP13.26□□□□□ -0.29
DEPDC5-205ENST00000400248 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.26□□□□□ -0.29
DEPDC5-205ENST00000400248 SMARCA2P51531 1590 aa13.26□□□□□ -0.29
DEPDC5-205ENST00000400248 MTUS2Q5JR59 1369 aa13.24□□□□□ -0.29
DEPDC5-205ENST00000400248 TOP2AP11388 1531 aaKnown RBP13.23□□□□□ -0.29
DEPDC5-205ENST00000400248 CEP164Q9UPV0 1460 aa13.23□□□□□ -0.29
DEPDC5-205ENST00000400248 GLIPR1L2Q4G1C9 344 aa13.22□□□□□ -0.29
DEPDC5-205ENST00000400248 SUPT16HQ9Y5B9 1047 aaKnown RBP13.22□□□□□ -0.29
DEPDC5-205ENST00000400248 CCDC88BA6NC98 1476 aa13.2□□□□□ -0.3
DEPDC5-205ENST00000400248 WDR43Q15061 677 aaKnown RBP eCLIP13.19□□□□□ -0.3
DEPDC5-205ENST00000400248 WIZO95785 1651 aa13.18□□□□□ -0.3
DEPDC5-205ENST00000400248 KDM2AQ9Y2K7 1162 aa13.16□□□□□ -0.3
DEPDC5-205ENST00000400248 SMARCA4P51532 1647 aa13.16□□□□□ -0.3
DEPDC5-205ENST00000400248 DDRGK1Q96HY6 314 aa13.16□□□□□ -0.3
DEPDC5-205ENST00000400248 RRP7BPQ9NSQ0 103 aa13.15□□□□□ -0.3
DEPDC5-205ENST00000400248 ARXQ96QS3 562 aa13.14□□□□□ -0.31
DEPDC5-205ENST00000400248 PPP4R2Q9NY27 417 aa13.13□□□□□ -0.31
DEPDC5-205ENST00000400248 KIF27Q86VH2 1401 aa13.13□□□□□ -0.31
DEPDC5-205ENST00000400248 TSPY4P0CV99 314 aa13.12□□□□□ -0.31
DEPDC5-205ENST00000400248 TSPY10P0CW01 314 aa13.12□□□□□ -0.31
DEPDC5-205ENST00000400248 CHGAP10645 457 aaKnown RBP13.11□□□□□ -0.31
DEPDC5-205ENST00000400248 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.11□□□□□ -0.31
DEPDC5-205ENST00000400248 PLPPR3Q6T4P5 718 aa13.1□□□□□ -0.31
DEPDC5-205ENST00000400248 SIN3AQ96ST3 1273 aa13.09□□□□□ -0.31
DEPDC5-205ENST00000400248 BECN1Q14457 450 aa13.08□□□□□ -0.32
DEPDC5-205ENST00000400248 NPM1P06748 294 aaKnown RBP eCLIP13.08□□□□□ -0.32
DEPDC5-205ENST00000400248 PPM1GO15355 546 aaPredicted RBP13.07□□□□□ -0.32
DEPDC5-205ENST00000400248 ATAD2BQ9ULI0 1458 aa13.06□□□□□ -0.32
DEPDC5-205ENST00000400248 NOP58Q9Y2X3 529 aaKnown RBP13.06□□□□□ -0.32
DEPDC5-205ENST00000400248 STAG3Q9UJ98 1225 aa13.05□□□□□ -0.32
DEPDC5-205ENST00000400248 SOGA1O94964 1423 aa13.05□□□□□ -0.32
DEPDC5-205ENST00000400248 SENP3-EIF4A1A0A087X0R7 540 aa13.03□□□□□ -0.32
DEPDC5-205ENST00000400248 CCER2I3L3R5 266 aa13.02□□□□□ -0.33
DEPDC5-205ENST00000400248 RBM19Q9Y4C8 960 aaKnown RBP13.02□□□□□ -0.33
DEPDC5-205ENST00000400248 CCNB3Q8WWL7 1395 aa13.02□□□□□ -0.33
DEPDC5-205ENST00000400248 ABCC8Q09428 1581 aa13.01□□□□□ -0.33
DEPDC5-205ENST00000400248 TIMELESSQ9UNS1 1208 aa13.01□□□□□ -0.33
DEPDC5-205ENST00000400248 B4GALNT3Q6L9W6 998 aa13.01□□□□□ -0.33
DEPDC5-205ENST00000400248 LAS1LQ9Y4W2 734 aaKnown RBP12.99□□□□□ -0.33
DEPDC5-205ENST00000400248 A0A0G2JS52 829 aa12.99□□□□□ -0.33
DEPDC5-205ENST00000400248 VPS8Q8N3P4 1428 aa12.98□□□□□ -0.33
DEPDC5-205ENST00000400248 TRIM44Q96DX7 344 aaPredicted RBP12.98□□□□□ -0.33
DEPDC5-205ENST00000400248 ERICH6BQ5W0A0 696 aa12.97□□□□□ -0.33
DEPDC5-205ENST00000400248 CARD11Q9BXL7 1154 aa12.97□□□□□ -0.33
DEPDC5-205ENST00000400248 MYH16Q9H6N6 1097 aa12.97□□□□□ -0.33
DEPDC5-205ENST00000400248 RGL3Q3MIN7 710 aa12.94□□□□□ -0.34
DEPDC5-205ENST00000400248 RTN4Q9NQC3 1192 aaKnown RBP12.94□□□□□ -0.34
DEPDC5-205ENST00000400248 GOLGA6L22H0YM25 854 aa12.93□□□□□ -0.34
DEPDC5-205ENST00000400248 TSHZ2Q9NRE2 1034 aa12.93□□□□□ -0.34
DEPDC5-205ENST00000400248 KNSTRNQ9Y448 316 aa12.93□□□□□ -0.34
DEPDC5-205ENST00000400248 DEKP35659 375 aaKnown RBP12.93□□□□□ -0.34
DEPDC5-205ENST00000400248 CDCA8Q53HL2 280 aa12.92□□□□□ -0.34
DEPDC5-205ENST00000400248 CUX2O14529 1486 aa12.91□□□□□ -0.34
DEPDC5-205ENST00000400248 CADPSQ9ULU8 1353 aa12.91□□□□□ -0.34
DEPDC5-205ENST00000400248 RGS3P49796 1198 aa12.9□□□□□ -0.34
DEPDC5-205ENST00000400248 CFDP1Q9UEE9 299 aaPredicted RBP12.9□□□□□ -0.34
DEPDC5-205ENST00000400248 SETD5Q9C0A6 1442 aa12.9□□□□□ -0.34
DEPDC5-205ENST00000400248 CHMP7Q8WUX9 453 aaPredicted RBP12.9□□□□□ -0.34
DEPDC5-205ENST00000400248 FHAD1B1AJZ9 1412 aa12.89□□□□□ -0.35
DEPDC5-205ENST00000400248 PLEKHD1A6NEE1 506 aa12.89□□□□□ -0.35
DEPDC5-205ENST00000400248 PDS5BQ9NTI5 1447 aa12.89□□□□□ -0.35
DEPDC5-205ENST00000400248 CARMIL1Q5VZK9 1371 aa12.89□□□□□ -0.35
DEPDC5-205ENST00000400248 CDK11BP21127 795 aaKnown RBP12.88□□□□□ -0.35
DEPDC5-205ENST00000400248 CFAP53Q96M91 514 aa12.87□□□□□ -0.35
DEPDC5-205ENST00000400248 NCLP19338 710 aaKnown RBP12.86□□□□□ -0.35
DEPDC5-205ENST00000400248 HSPA5P11021 654 aaKnown RBP12.86□□□□□ -0.35
DEPDC5-205ENST00000400248 NCAPD3P42695 1498 aa12.85□□□□□ -0.35
DEPDC5-205ENST00000400248 KANK4Q5T7N3 995 aaPredicted RBP12.85□□□□□ -0.35
DEPDC5-205ENST00000400248 FTSJ3Q8IY81 847 aaKnown RBP12.85□□□□□ -0.35
DEPDC5-205ENST00000400248 NAP1L5Q96NT1 182 aaPredicted RBP12.83□□□□□ -0.35
DEPDC5-205ENST00000400248 ERCC6Q03468 1493 aa12.82□□□□□ -0.36
DEPDC5-205ENST00000400248 NEUROD2Q15784 382 aa12.82□□□□□ -0.36
DEPDC5-205ENST00000400248 CC2D1BQ5T0F9 858 aaKnown RBP12.82□□□□□ -0.36
DEPDC5-205ENST00000400248 RAB3GAP2Q9H2M9 1393 aa12.82□□□□□ -0.36
DEPDC5-205ENST00000400248 HAP1P54257 671 aaPredicted RBP12.81□□□□□ -0.36
DEPDC5-205ENST00000400248 FRAT1Q92837 279 aaPredicted RBP12.81□□□□□ -0.36
DEPDC5-205ENST00000400248 PTMAP06454 111 aaKnown RBP12.8□□□□□ -0.36
DEPDC5-205ENST00000400248 EIF4G1Q04637 1599 aaKnown RBP12.79□□□□□ -0.36
DEPDC5-205ENST00000400248 KCNH8Q96L42 1107 aa12.78□□□□□ -0.36
DEPDC5-205ENST00000400248 PPP1R15AO75807 674 aaPredicted RBP12.78□□□□□ -0.36
DEPDC5-205ENST00000400248 C14orf37Q86TY3 774 aa12.78□□□□□ -0.36
DEPDC5-205ENST00000400248 CASC1Q6TDU7 716 aa12.77□□□□□ -0.36
DEPDC5-205ENST00000400248 ARHGAP35Q9NRY4 1499 aa12.77□□□□□ -0.37
DEPDC5-205ENST00000400248 DCAF11Q8TEB1 546 aa12.76□□□□□ -0.37
DEPDC5-205ENST00000400248 MS4A1P11836 297 aa12.76□□□□□ -0.37
DEPDC5-205ENST00000400248 TNNT2P45379 298 aaPredicted RBP12.76□□□□□ -0.37
DEPDC5-205ENST00000400248 TMF1P82094 1093 aa12.76□□□□□ -0.37
DEPDC5-205ENST00000400248 MAPK8IP3Q9UPT6 1336 aa12.76□□□□□ -0.37
DEPDC5-205ENST00000400248 TCERG1O14776 1098 aaKnown RBP12.75□□□□□ -0.37
DEPDC5-205ENST00000400248 L1TD1Q5T7N2 865 aaKnown RBP12.75□□□□□ -0.37
DEPDC5-205ENST00000400248 DNTTIP2Q5QJE6 756 aaKnown RBP12.75□□□□□ -0.37
DEPDC5-205ENST00000400248 NUDCQ9Y266 331 aa12.75□□□□□ -0.37
DEPDC5-205ENST00000400248 HSP90AB1P08238 724 aaKnown RBP12.74□□□□□ -0.37
DEPDC5-205ENST00000400248 RCAN3Q9UKA8 241 aa12.74□□□□□ -0.37
DEPDC5-205ENST00000400248 RAPGEF2Q9Y4G8 1499 aa12.73□□□□□ -0.37
DEPDC5-205ENST00000400248 FANCD2Q9BXW9 1451 aa12.72□□□□□ -0.37
DEPDC5-205ENST00000400248 HMGXB3Q12766 1538 aa12.72□□□□□ -0.37
DEPDC5-205ENST00000400248 CHMP4BQ9H444 224 aaKnown RBP12.72□□□□□ -0.37
DEPDC5-205ENST00000400248 SENP3Q9H4L4 574 aaPredicted RBP12.72□□□□□ -0.37
DEPDC5-205ENST00000400248 IPO9Q96P70 1041 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms