RNA–Protein interactions for RNA: ENST00000399959.6

DDX3X-201, Transcript of DEAD-box helicase 3 X-linked, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX3X, Length 5,399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-201ENST00000399959 WDR43Q15061 677 aaKnown RBP eCLIP17.99■□□□□ 0.47
DDX3X-201ENST00000399959 P3H3Q8IVL6 736 aa17.99■□□□□ 0.47
DDX3X-201ENST00000399959 NCLP19338 710 aaKnown RBP17.96■□□□□ 0.47
DDX3X-201ENST00000399959 L1TD1Q5T7N2 865 aaKnown RBP17.95■□□□□ 0.46
DDX3X-201ENST00000399959 B4GALNT3Q6L9W6 998 aa17.94■□□□□ 0.46
DDX3X-201ENST00000399959 EIF4G2P78344 907 aaKnown RBP eCLIP17.93■□□□□ 0.46
DDX3X-201ENST00000399959 MYH16Q9H6N6 1097 aa17.83■□□□□ 0.45
DDX3X-201ENST00000399959 ZNF777Q9ULD5 760 aaPredicted RBP17.81■□□□□ 0.44
DDX3X-201ENST00000399959 MSNP26038 577 aaKnown RBP17.81■□□□□ 0.44
DDX3X-201ENST00000399959 ARID4BQ4LE39 1312 aaPredicted RBP17.81■□□□□ 0.44
DDX3X-201ENST00000399959 PNNQ9H307 717 aaKnown RBP17.8■□□□□ 0.44
DDX3X-201ENST00000399959 ARID3CA6NKF2 412 aa17.8■□□□□ 0.44
DDX3X-201ENST00000399959 RGS3P49796 1198 aa17.79■□□□□ 0.44
DDX3X-201ENST00000399959 AMER1Q5JTC6 1135 aaPredicted RBP17.77■□□□□ 0.44
DDX3X-201ENST00000399959 SENP3-EIF4A1A0A087X0R7 540 aa17.76■□□□□ 0.43
DDX3X-201ENST00000399959 CHIC2Q9UKJ5 165 aa17.74■□□□□ 0.43
DDX3X-201ENST00000399959 CCER2I3L3R5 266 aa17.74■□□□□ 0.43
DDX3X-201ENST00000399959 CLIP1P30622 1438 aa17.73■□□□□ 0.43
DDX3X-201ENST00000399959 RSPH6AQ9H0K4 717 aa17.72■□□□□ 0.43
DDX3X-201ENST00000399959 CHAF1AQ13111 956 aaPredicted RBP17.71■□□□□ 0.43
DDX3X-201ENST00000399959 IPO9Q96P70 1041 aaKnown RBP17.71■□□□□ 0.43
DDX3X-201ENST00000399959 CEP162Q5TB80 1403 aa17.71■□□□□ 0.43
DDX3X-201ENST00000399959 HSP90AB1P08238 724 aaKnown RBP17.69■□□□□ 0.42
DDX3X-201ENST00000399959 PLCB2Q00722 1185 aa17.68■□□□□ 0.42
DDX3X-201ENST00000399959 KDM2AQ9Y2K7 1162 aa17.68■□□□□ 0.42
DDX3X-201ENST00000399959 HSP90AA2PQ14568 343 aaPredicted RBP17.67■□□□□ 0.42
DDX3X-201ENST00000399959 VSIG10Q8N0Z9 540 aa17.67■□□□□ 0.42
DDX3X-201ENST00000399959 CASC1Q6TDU7 716 aa17.64■□□□□ 0.42
DDX3X-201ENST00000399959 ZRSR1Q15695 479 aaKnown RBP17.64■□□□□ 0.41
DDX3X-201ENST00000399959 HSCBQ8IWL3 235 aa17.64■□□□□ 0.41
DDX3X-201ENST00000399959 TPRNQ4KMQ1 711 aa17.64■□□□□ 0.41
DDX3X-201ENST00000399959 ARID3AQ99856 593 aa17.61■□□□□ 0.41
DDX3X-201ENST00000399959 TCERG1O14776 1098 aaKnown RBP17.61■□□□□ 0.41
DDX3X-201ENST00000399959 USP35Q9P2H5 1018 aa17.6■□□□□ 0.41
DDX3X-201ENST00000399959 FTSJ3Q8IY81 847 aaKnown RBP17.6■□□□□ 0.41
DDX3X-201ENST00000399959 PABPN1Q86U42 306 aaKnown RBP eCLIP17.59■□□□□ 0.413e-7■■□□□ 14.4
DDX3X-201ENST00000399959 GOLGA6L3A6NEY3 463 aa17.58■□□□□ 0.41
DDX3X-201ENST00000399959 GOLGA6L6A8MZA4 724 aa17.58■□□□□ 0.4
DDX3X-201ENST00000399959 SPRYD3Q8NCJ5 442 aa17.57■□□□□ 0.4
DDX3X-201ENST00000399959 SIN3AQ96ST3 1273 aa17.56■□□□□ 0.4
DDX3X-201ENST00000399959 GZF1Q9H116 711 aaPredicted RBP17.56■□□□□ 0.4
DDX3X-201ENST00000399959 GOLGA3Q08378 1498 aa17.56■□□□□ 0.4
DDX3X-201ENST00000399959 MTUS2Q5JR59 1369 aa17.55■□□□□ 0.4
DDX3X-201ENST00000399959 CHGAP10645 457 aaKnown RBP17.54■□□□□ 0.4
DDX3X-201ENST00000399959 PTMSP20962 102 aa17.54■□□□□ 0.4
DDX3X-201ENST00000399959 FANCIQ9NVI1 1328 aa17.54■□□□□ 0.4
DDX3X-201ENST00000399959 RRP7BPQ9NSQ0 103 aa17.53■□□□□ 0.4
DDX3X-201ENST00000399959 NRDCO43847 1150 aa17.52■□□□□ 0.4
DDX3X-201ENST00000399959 TNNT3P45378 269 aaPredicted RBP17.51■□□□□ 0.39
DDX3X-201ENST00000399959 GBP4Q96PP9 640 aa17.51■□□□□ 0.39
DDX3X-201ENST00000399959 FRAT1Q92837 279 aaPredicted RBP17.51■□□□□ 0.39
DDX3X-201ENST00000399959 SLKQ9H2G2 1235 aaPredicted RBP17.51■□□□□ 0.39
DDX3X-201ENST00000399959 EEA1Q15075 1411 aa17.5■□□□□ 0.39
DDX3X-201ENST00000399959 FBLN2P98095 1184 aa17.5■□□□□ 0.39
DDX3X-201ENST00000399959 KIAA2012Q0VF49 1180 aa17.5■□□□□ 0.39
DDX3X-201ENST00000399959 TNIKQ9UKE5 1360 aa17.5■□□□□ 0.39
DDX3X-201ENST00000399959 GSE1Q14687 1217 aa17.49■□□□□ 0.39
DDX3X-201ENST00000399959 KNSTRNQ9Y448 316 aa17.48■□□□□ 0.39
DDX3X-201ENST00000399959 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.47■□□□□ 0.394e-10■□□□□ 8.1
DDX3X-201ENST00000399959 ZBTB7CA1YPR0 619 aa17.47■□□□□ 0.39
DDX3X-201ENST00000399959 TIMELESSQ9UNS1 1208 aa17.46■□□□□ 0.39
DDX3X-201ENST00000399959 ZCCHC6Q5VYS8 1495 aaKnown RBP17.46■□□□□ 0.39
DDX3X-201ENST00000399959 PRKCSHP14314 528 aaPredicted RBP17.45■□□□□ 0.38
DDX3X-201ENST00000399959 MS4A1P11836 297 aa17.44■□□□□ 0.38
DDX3X-201ENST00000399959 CFAP53Q96M91 514 aa17.44■□□□□ 0.38
DDX3X-201ENST00000399959 CARD11Q9BXL7 1154 aa17.44■□□□□ 0.38
DDX3X-201ENST00000399959 DRC7Q8IY82 874 aa17.43■□□□□ 0.38
DDX3X-201ENST00000399959 NEUROD2Q15784 382 aa17.41■□□□□ 0.38
DDX3X-201ENST00000399959 CHMP4BQ9H444 224 aaKnown RBP17.41■□□□□ 0.38
DDX3X-201ENST00000399959 TSPY4P0CV99 314 aa17.4■□□□□ 0.38
DDX3X-201ENST00000399959 TSPY10P0CW01 314 aa17.4■□□□□ 0.38
DDX3X-201ENST00000399959 CDCA8Q53HL2 280 aa17.4■□□□□ 0.38
DDX3X-201ENST00000399959 RCAN3Q9UKA8 241 aa17.4■□□□□ 0.38
DDX3X-201ENST00000399959 GOLGA6L4A6NEF3 574 aa17.38■□□□□ 0.37
DDX3X-201ENST00000399959 PKNOX2Q96KN3 472 aa17.37■□□□□ 0.37
DDX3X-201ENST00000399959 ANO8Q9HCE9 1232 aaPredicted RBP17.36■□□□□ 0.37
DDX3X-201ENST00000399959 ABCC9O60706 1549 aa17.36■□□□□ 0.37
DDX3X-201ENST00000399959 NUDCQ9Y266 331 aa17.35■□□□□ 0.37
DDX3X-201ENST00000399959 RSF1Q96T23 1441 aaPredicted RBP17.35■□□□□ 0.37
DDX3X-201ENST00000399959 CC2D1BQ5T0F9 858 aaKnown RBP17.35■□□□□ 0.37
DDX3X-201ENST00000399959 STAG3Q9UJ98 1225 aa17.33■□□□□ 0.36
DDX3X-201ENST00000399959 CFAP44Q96MT7 982 aa17.33■□□□□ 0.36
DDX3X-201ENST00000399959 SCRIBQ14160 1630 aa17.32■□□□□ 0.36
DDX3X-201ENST00000399959 HSPA5P11021 654 aaKnown RBP17.32■□□□□ 0.36
DDX3X-201ENST00000399959 CCNB3Q8WWL7 1395 aa17.31■□□□□ 0.36
DDX3X-201ENST00000399959 SYAP1Q96A49 352 aaPredicted RBP17.31■□□□□ 0.36
DDX3X-201ENST00000399959 MAPK8IP3Q9UPT6 1336 aa17.31■□□□□ 0.36
DDX3X-201ENST00000399959 RGL3Q3MIN7 710 aa17.29■□□□□ 0.36
DDX3X-201ENST00000399959 MCCP23508 829 aa17.29■□□□□ 0.36
DDX3X-201ENST00000399959 CEP164Q9UPV0 1460 aa17.29■□□□□ 0.36
DDX3X-201ENST00000399959 PDE4AP27815 886 aa17.29■□□□□ 0.36
DDX3X-201ENST00000399959 DDX11L8A8MPP1 907 aa17.27■□□□□ 0.36
DDX3X-201ENST00000399959 CALD1Q05682 793 aaKnown RBP17.27■□□□□ 0.36
DDX3X-201ENST00000399959 RWDD1Q9H446 243 aaPredicted RBP17.24■□□□□ 0.35
DDX3X-201ENST00000399959 SLC4A3P48751 1232 aa17.24■□□□□ 0.35
DDX3X-201ENST00000399959 MFAP1P55081 439 aaKnown RBP17.23■□□□□ 0.35
DDX3X-201ENST00000399959 KCNH8Q96L42 1107 aa17.23■□□□□ 0.35
DDX3X-201ENST00000399959 FGD1P98174 961 aa17.22■□□□□ 0.35
DDX3X-201ENST00000399959 KCNJ4P48050 445 aa17.22■□□□□ 0.35
DDX3X-201ENST00000399959 SETD5Q9C0A6 1442 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms