RNA–Protein interactions for RNA: ENST00000398896.5

USP19-204, Transcript of ubiquitin specific peptidase 19, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene USP19, Length 3,907 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP19-204ENST00000398896 BRPF3Q9ULD4 1205 aa14.44□□□□□ -0.1
USP19-204ENST00000398896 ZMYND15Q9H091 742 aa14.42□□□□□ -0.1
USP19-204ENST00000398896 FAM9BQ8IZU0 186 aa14.41□□□□□ -0.1
USP19-204ENST00000398896 CLIP1P30622 1438 aa14.39□□□□□ -0.11
USP19-204ENST00000398896 GOLGA3Q08378 1498 aa14.36□□□□□ -0.11
USP19-204ENST00000398896 ABCC9O60706 1549 aa14.36□□□□□ -0.11
USP19-204ENST00000398896 EEA1Q15075 1411 aa14.36□□□□□ -0.11
USP19-204ENST00000398896 A0A0U1RQG5 324 aaPredicted RBP14.35□□□□□ -0.11
USP19-204ENST00000398896 NAP1L5Q96NT1 182 aaPredicted RBP14.33□□□□□ -0.12
USP19-204ENST00000398896 GSE1Q14687 1217 aa14.33□□□□□ -0.12
USP19-204ENST00000398896 HSP90AA2PQ14568 343 aaPredicted RBP14.32□□□□□ -0.12
USP19-204ENST00000398896 DDRGK1Q96HY6 314 aa14.32□□□□□ -0.12
USP19-204ENST00000398896 PPP1R15AO75807 674 aaPredicted RBP14.31□□□□□ -0.12
USP19-204ENST00000398896 CNGB1Q14028 1251 aaPredicted RBP14.31□□□□□ -0.12
USP19-204ENST00000398896 SIN3AQ96ST3 1273 aa14.31□□□□□ -0.12
USP19-204ENST00000398896 MRS2Q9HD23 443 aa14.31□□□□□ -0.12
USP19-204ENST00000398896 C11orf95C9JLR9 678 aaPredicted RBP14.3□□□□□ -0.12
USP19-204ENST00000398896 SOGA1O94964 1423 aa14.3□□□□□ -0.12
USP19-204ENST00000398896 FAM50AQ14320 339 aaKnown RBP14.29□□□□□ -0.12
USP19-204ENST00000398896 HSP90AA1P07900 732 aaKnown RBP14.27□□□□□ -0.12
USP19-204ENST00000398896 TONSLQ96HA7 1378 aa14.26□□□□□ -0.13
USP19-204ENST00000398896 VPS8Q8N3P4 1428 aa14.26□□□□□ -0.13
USP19-204ENST00000398896 WASHC2AQ641Q2 1341 aa14.24□□□□□ -0.13
USP19-204ENST00000398896 ATP1B4Q9UN42 357 aaPredicted RBP14.24□□□□□ -0.13
USP19-204ENST00000398896 FAM43AQ8N2R8 423 aa14.23□□□□□ -0.13
USP19-204ENST00000398896 CCDC88BA6NC98 1476 aa14.22□□□□□ -0.13
USP19-204ENST00000398896 WASHC2CQ9Y4E1 1318 aa14.19□□□□□ -0.14
USP19-204ENST00000398896 POLR3GLQ9BT43 218 aa14.19□□□□□ -0.14
USP19-204ENST00000398896 TCERG1O14776 1098 aaKnown RBP14.19□□□□□ -0.14
USP19-204ENST00000398896 FRAT1Q92837 279 aaPredicted RBP14.18□□□□□ -0.14
USP19-204ENST00000398896 PNNQ9H307 717 aaKnown RBP14.17□□□□□ -0.14
USP19-204ENST00000398896 CEP164Q9UPV0 1460 aa14.15□□□□□ -0.14
USP19-204ENST00000398896 CCNB3Q8WWL7 1395 aa14.15□□□□□ -0.14
USP19-204ENST00000398896 ARXQ96QS3 562 aa14.14□□□□□ -0.15
USP19-204ENST00000398896 SCRIBQ14160 1630 aa14.14□□□□□ -0.15
USP19-204ENST00000398896 PDE4AP27815 886 aa14.14□□□□□ -0.15
USP19-204ENST00000398896 RAB3GAP2Q9H2M9 1393 aa14.13□□□□□ -0.15
USP19-204ENST00000398896 RRP9O43818 475 aaKnown RBP14.13□□□□□ -0.15
USP19-204ENST00000398896 KANK4Q5T7N3 995 aaPredicted RBP14.13□□□□□ -0.15
USP19-204ENST00000398896 NFKBIBQ15653 356 aa14.13□□□□□ -0.15
USP19-204ENST00000398896 ABCC8Q09428 1581 aa14.13□□□□□ -0.15
USP19-204ENST00000398896 PDE4CQ08493 712 aa14.11□□□□□ -0.15
USP19-204ENST00000398896 ARID4BQ4LE39 1312 aaPredicted RBP14.11□□□□□ -0.15
USP19-204ENST00000398896 ZBED9Q6R2W3 1325 aa14.1□□□□□ -0.15
USP19-204ENST00000398896 L1TD1Q5T7N2 865 aaKnown RBP14.09□□□□□ -0.15
USP19-204ENST00000398896 EIF4G2P78344 907 aaKnown RBP eCLIP14.08□□□□□ -0.16
USP19-204ENST00000398896 RBM10P98175 930 aaKnown RBP14.08□□□□□ -0.16
USP19-204ENST00000398896 NUDCQ9Y266 331 aa14.06□□□□□ -0.16
USP19-204ENST00000398896 BAZ1BQ9UIG0 1483 aaKnown RBP14.06□□□□□ -0.16
USP19-204ENST00000398896 SETD5Q9C0A6 1442 aa14.06□□□□□ -0.16
USP19-204ENST00000398896 RUSC2Q8N2Y8 1516 aa14.05□□□□□ -0.16
USP19-204ENST00000398896 SENP3-EIF4A1A0A087X0R7 540 aa14.04□□□□□ -0.16
USP19-204ENST00000398896 SLC4A3P48751 1232 aa14.04□□□□□ -0.16
USP19-204ENST00000398896 MS4A1P11836 297 aa14.03□□□□□ -0.16
USP19-204ENST00000398896 CECR2Q9BXF3 1484 aa14.02□□□□□ -0.17
USP19-204ENST00000398896 TMC1Q8TDI8 760 aa14.02□□□□□ -0.17
USP19-204ENST00000398896 BACH2Q9BYV9 841 aa13.99□□□□□ -0.17
USP19-204ENST00000398896 TRIM44Q96DX7 344 aaPredicted RBP13.98□□□□□ -0.17
USP19-204ENST00000398896 HSPA5P11021 654 aaKnown RBP13.98□□□□□ -0.17
USP19-204ENST00000398896 PRKRIP1Q9H875 184 aaPredicted RBP13.97□□□□□ -0.17
USP19-204ENST00000398896 WDR97A6NE52 1622 aa13.97□□□□□ -0.17
USP19-204ENST00000398896 MROH2BQ7Z745 1585 aa13.96□□□□□ -0.17
USP19-204ENST00000398896 BECN1Q14457 450 aa13.96□□□□□ -0.18
USP19-204ENST00000398896 FRAT2O75474 233 aaPredicted RBP13.95□□□□□ -0.18
USP19-204ENST00000398896 FGD1P98174 961 aa13.95□□□□□ -0.18
USP19-204ENST00000398896 NACADO15069 1562 aa13.95□□□□□ -0.18
USP19-204ENST00000398896 AAMPQ13685 434 aa13.93□□□□□ -0.18
USP19-204ENST00000398896 CCDC184Q52MB2 194 aa13.93□□□□□ -0.18
USP19-204ENST00000398896 EXOC6Q8TAG9 804 aa13.93□□□□□ -0.18
USP19-204ENST00000398896 AKNAQ7Z591 1439 aa13.91□□□□□ -0.18
USP19-204ENST00000398896 GOLGA6L3A6NEY3 463 aa13.91□□□□□ -0.18
USP19-204ENST00000398896 RRAGDQ9NQL2 400 aaPredicted RBP13.91□□□□□ -0.18
USP19-204ENST00000398896 PDIA4P13667 645 aaKnown RBP13.9□□□□□ -0.18
USP19-204ENST00000398896 ANP32BQ92688 251 aaKnown RBP13.9□□□□□ -0.18
USP19-204ENST00000398896 DCAF11Q8TEB1 546 aa13.9□□□□□ -0.18
USP19-204ENST00000398896 RCAN3Q9UKA8 241 aa13.89□□□□□ -0.19
USP19-204ENST00000398896 RRBP1Q9P2E9 1410 aaKnown RBP13.89□□□□□ -0.19
USP19-204ENST00000398896 UPF2Q9HAU5 1272 aaKnown RBP13.87□□□□□ -0.19
USP19-204ENST00000398896 NCLP19338 710 aaKnown RBP13.86□□□□□ -0.19
USP19-204ENST00000398896 RRP1P56182 461 aaKnown RBP13.86□□□□□ -0.19
USP19-204ENST00000398896 TNNT2P45379 298 aaPredicted RBP13.86□□□□□ -0.19
USP19-204ENST00000398896 RGS3P49796 1198 aa13.86□□□□□ -0.19
USP19-204ENST00000398896 SMG6Q86US8 1419 aaKnown RBP13.85□□□□□ -0.19
USP19-204ENST00000398896 BCL11BQ9C0K0 894 aaPredicted RBP13.85□□□□□ -0.19
USP19-204ENST00000398896 WIZO95785 1651 aa13.85□□□□□ -0.19
USP19-204ENST00000398896 GZF1Q9H116 711 aaPredicted RBP13.84□□□□□ -0.19
USP19-204ENST00000398896 SLKQ9H2G2 1235 aaPredicted RBP13.84□□□□□ -0.19
USP19-204ENST00000398896 MYH16Q9H6N6 1097 aa13.84□□□□□ -0.19
USP19-204ENST00000398896 KIF21BO75037 1637 aa13.84□□□□□ -0.19
USP19-204ENST00000398896 PDCL3Q9H2J4 239 aa13.84□□□□□ -0.19
USP19-204ENST00000398896 RAPGEF2Q9Y4G8 1499 aa13.84□□□□□ -0.19
USP19-204ENST00000398896 ARID3AQ99856 593 aa13.82□□□□□ -0.2
USP19-204ENST00000398896 FAM161AQ3B820 660 aa13.81□□□□□ -0.2
USP19-204ENST00000398896 ZNF326Q5BKZ1 582 aaKnown RBP13.81□□□□□ -0.2
USP19-204ENST00000398896 TPM2P07951 284 aa13.81□□□□□ -0.2
USP19-204ENST00000398896 CLCN1P35523 988 aa13.81□□□□□ -0.2
USP19-204ENST00000398896 CALD1Q05682 793 aaKnown RBP13.79□□□□□ -0.2
USP19-204ENST00000398896 POGKQ9P215 609 aa13.79□□□□□ -0.2
USP19-204ENST00000398896 CNTLNQ9NXG0 1405 aa13.79□□□□□ -0.2
USP19-204ENST00000398896 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms