RNA–Protein interactions for RNA: ENST00000397491.6

CHL1-202, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 5,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-202ENST00000397491 SCRIBQ14160 1630 aa19.87■□□□□ 0.77
CHL1-202ENST00000397491 B4GALNT3Q6L9W6 998 aa19.85■□□□□ 0.77
CHL1-202ENST00000397491 WDR43Q15061 677 aaKnown RBP eCLIP19.84■□□□□ 0.77
CHL1-202ENST00000397491 SENP3-EIF4A1A0A087X0R7 540 aa19.83■□□□□ 0.77
CHL1-202ENST00000397491 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.83■□□□□ 0.77
CHL1-202ENST00000397491 EIF4G2P78344 907 aaKnown RBP eCLIP19.83■□□□□ 0.76
CHL1-202ENST00000397491 ZNF777Q9ULD5 760 aaPredicted RBP19.82■□□□□ 0.76
CHL1-202ENST00000397491 GOLGA6L22H0YM25 854 aa19.79■□□□□ 0.76
CHL1-202ENST00000397491 CHIC2Q9UKJ5 165 aa19.76■□□□□ 0.75
CHL1-202ENST00000397491 NCLP19338 710 aaKnown RBP19.75■□□□□ 0.75
CHL1-202ENST00000397491 DNTTIP2Q5QJE6 756 aaKnown RBP19.75■□□□□ 0.75
CHL1-202ENST00000397491 PTMAP06454 111 aaKnown RBP19.74■□□□□ 0.75
CHL1-202ENST00000397491 ZCCHC6Q5VYS8 1495 aaKnown RBP19.71■□□□□ 0.75
CHL1-202ENST00000397491 CLIP1P30622 1438 aa19.68■□□□□ 0.74
CHL1-202ENST00000397491 CEP162Q5TB80 1403 aa19.66■□□□□ 0.74
CHL1-202ENST00000397491 RGS3P49796 1198 aa19.66■□□□□ 0.74
CHL1-202ENST00000397491 KDM2AQ9Y2K7 1162 aa19.65■□□□□ 0.74
CHL1-202ENST00000397491 CDK11BP21127 795 aaKnown RBP19.65■□□□□ 0.74
CHL1-202ENST00000397491 ARID4BQ4LE39 1312 aaPredicted RBP19.63■□□□□ 0.73
CHL1-202ENST00000397491 L1TD1Q5T7N2 865 aaKnown RBP19.62■□□□□ 0.73
CHL1-202ENST00000397491 MYH16Q9H6N6 1097 aa19.6■□□□□ 0.73
CHL1-202ENST00000397491 SIN3AQ96ST3 1273 aa19.55■□□□□ 0.72
CHL1-202ENST00000397491 CCER2I3L3R5 266 aa19.55■□□□□ 0.72
CHL1-202ENST00000397491 PNNQ9H307 717 aaKnown RBP19.52■□□□□ 0.72
CHL1-202ENST00000397491 MSNP26038 577 aaKnown RBP19.5■□□□□ 0.71
CHL1-202ENST00000397491 AMER1Q5JTC6 1135 aaPredicted RBP19.5■□□□□ 0.71
CHL1-202ENST00000397491 RRP7BPQ9NSQ0 103 aa19.5■□□□□ 0.71
CHL1-202ENST00000397491 TPRNQ4KMQ1 711 aa19.5■□□□□ 0.71
CHL1-202ENST00000397491 CHGAP10645 457 aaKnown RBP19.49■□□□□ 0.71
CHL1-202ENST00000397491 IPO9Q96P70 1041 aaKnown RBP19.48■□□□□ 0.71
CHL1-202ENST00000397491 MTUS2Q5JR59 1369 aa19.47■□□□□ 0.71
CHL1-202ENST00000397491 PLCB2Q00722 1185 aa19.47■□□□□ 0.71
CHL1-202ENST00000397491 GOLGA3Q08378 1498 aa19.44■□□□□ 0.7
CHL1-202ENST00000397491 HSP90AB1P08238 724 aaKnown RBP19.44■□□□□ 0.7
CHL1-202ENST00000397491 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.44■□□□□ 0.7
CHL1-202ENST00000397491 SPRYD3Q8NCJ5 442 aa19.42■□□□□ 0.7
CHL1-202ENST00000397491 FTSJ3Q8IY81 847 aaKnown RBP19.41■□□□□ 0.7
CHL1-202ENST00000397491 ARID3AQ99856 593 aa19.41■□□□□ 0.7
CHL1-202ENST00000397491 TNIKQ9UKE5 1360 aa19.4■□□□□ 0.7
CHL1-202ENST00000397491 NPM1P06748 294 aaKnown RBP eCLIP19.39■□□□□ 0.69
CHL1-202ENST00000397491 FRAT1Q92837 279 aaPredicted RBP19.38■□□□□ 0.69
CHL1-202ENST00000397491 HSCBQ8IWL3 235 aa19.38■□□□□ 0.69
CHL1-202ENST00000397491 GZF1Q9H116 711 aaPredicted RBP19.38■□□□□ 0.69
CHL1-202ENST00000397491 TCERG1O14776 1098 aaKnown RBP19.36■□□□□ 0.69
CHL1-202ENST00000397491 CHAF1AQ13111 956 aaPredicted RBP19.36■□□□□ 0.69
CHL1-202ENST00000397491 CASC1Q6TDU7 716 aa19.36■□□□□ 0.69
CHL1-202ENST00000397491 EEA1Q15075 1411 aa19.35■□□□□ 0.69
CHL1-202ENST00000397491 VSIG10Q8N0Z9 540 aa19.35■□□□□ 0.69
CHL1-202ENST00000397491 RSPH6AQ9H0K4 717 aa19.35■□□□□ 0.69
CHL1-202ENST00000397491 HSP90AA2PQ14568 343 aaPredicted RBP19.34■□□□□ 0.69
CHL1-202ENST00000397491 ZRSR1Q15695 479 aaKnown RBP19.34■□□□□ 0.69
CHL1-202ENST00000397491 SLKQ9H2G2 1235 aaPredicted RBP19.34■□□□□ 0.69
CHL1-202ENST00000397491 KNSTRNQ9Y448 316 aa19.33■□□□□ 0.68
CHL1-202ENST00000397491 NEUROD2Q15784 382 aa19.33■□□□□ 0.68
CHL1-202ENST00000397491 ESF1Q9H501 851 aaKnown RBP19.33■□□□□ 0.68
CHL1-202ENST00000397491 CARD11Q9BXL7 1154 aa19.32■□□□□ 0.68
CHL1-202ENST00000397491 CHMP7Q8WUX9 453 aaPredicted RBP19.32■□□□□ 0.68
CHL1-202ENST00000397491 TSPY4P0CV99 314 aa19.31■□□□□ 0.68
CHL1-202ENST00000397491 TSPY10P0CW01 314 aa19.31■□□□□ 0.68
CHL1-202ENST00000397491 PLPPR3Q6T4P5 718 aa19.3■□□□□ 0.68
CHL1-202ENST00000397491 GOLGA6L3A6NEY3 463 aa19.29■□□□□ 0.68
CHL1-202ENST00000397491 ZBTB7CA1YPR0 619 aa19.29■□□□□ 0.68
CHL1-202ENST00000397491 USP35Q9P2H5 1018 aa19.29■□□□□ 0.68
CHL1-202ENST00000397491 TIMELESSQ9UNS1 1208 aa19.27■□□□□ 0.68
CHL1-202ENST00000397491 FANCIQ9NVI1 1328 aa19.27■□□□□ 0.67
CHL1-202ENST00000397491 RB1CC1Q8TDY2 1594 aa19.26■□□□□ 0.67
CHL1-202ENST00000397491 RGL3Q3MIN7 710 aa19.26■□□□□ 0.67
CHL1-202ENST00000397491 CC2D1BQ5T0F9 858 aaKnown RBP19.24■□□□□ 0.67
CHL1-202ENST00000397491 CFAP53Q96M91 514 aa19.23■□□□□ 0.67
CHL1-202ENST00000397491 STAG3Q9UJ98 1225 aa19.22■□□□□ 0.67
CHL1-202ENST00000397491 GSE1Q14687 1217 aa19.22■□□□□ 0.67
CHL1-202ENST00000397491 RSF1Q96T23 1441 aaPredicted RBP19.22■□□□□ 0.67
CHL1-202ENST00000397491 RCAN3Q9UKA8 241 aa19.21■□□□□ 0.67
CHL1-202ENST00000397491 GBP4Q96PP9 640 aa19.21■□□□□ 0.67
CHL1-202ENST00000397491 KCNH8Q96L42 1107 aa19.2■□□□□ 0.66
CHL1-202ENST00000397491 CCNB3Q8WWL7 1395 aa19.2■□□□□ 0.66
CHL1-202ENST00000397491 HSPA5P11021 654 aaKnown RBP19.2■□□□□ 0.66
CHL1-202ENST00000397491 GOLGA6L6A8MZA4 724 aa19.19■□□□□ 0.66
CHL1-202ENST00000397491 CDCA8Q53HL2 280 aa19.18■□□□□ 0.66
CHL1-202ENST00000397491 KIAA2012Q0VF49 1180 aa19.17■□□□□ 0.66
CHL1-202ENST00000397491 CEP164Q9UPV0 1460 aa19.16■□□□□ 0.66
CHL1-202ENST00000397491 NRDCO43847 1150 aa19.16■□□□□ 0.66
CHL1-202ENST00000397491 MS4A1P11836 297 aa19.15■□□□□ 0.66
CHL1-202ENST00000397491 NUDCQ9Y266 331 aa19.15■□□□□ 0.66
CHL1-202ENST00000397491 PTMSP20962 102 aa19.14■□□□□ 0.65
CHL1-202ENST00000397491 DRC7Q8IY82 874 aa19.13■□□□□ 0.65
CHL1-202ENST00000397491 TNNT3P45378 269 aaPredicted RBP19.11■□□□□ 0.65
CHL1-202ENST00000397491 ANO8Q9HCE9 1232 aaPredicted RBP19.1■□□□□ 0.65
CHL1-202ENST00000397491 MAPK8IP3Q9UPT6 1336 aa19.1■□□□□ 0.65
CHL1-202ENST00000397491 GOLGA6L4A6NEF3 574 aa19.1■□□□□ 0.65
CHL1-202ENST00000397491 CHMP4BQ9H444 224 aaKnown RBP19.1■□□□□ 0.65
CHL1-202ENST00000397491 SLC4A3P48751 1232 aa19.09■□□□□ 0.65
CHL1-202ENST00000397491 PDE4AP27815 886 aa19.07■□□□□ 0.64
CHL1-202ENST00000397491 SETD5Q9C0A6 1442 aa19.06■□□□□ 0.64
CHL1-202ENST00000397491 PRKCSHP14314 528 aaPredicted RBP19.06■□□□□ 0.64
CHL1-202ENST00000397491 NACADO15069 1562 aa19.06■□□□□ 0.64
CHL1-202ENST00000397491 BAZ1BQ9UIG0 1483 aaKnown RBP19.05■□□□□ 0.64
CHL1-202ENST00000397491 WRNQ14191 1432 aaPredicted RBP eCLIP19.04■□□□□ 0.64
CHL1-202ENST00000397491 MFAP1P55081 439 aaKnown RBP19.02■□□□□ 0.63
CHL1-202ENST00000397491 SENP3Q9H4L4 574 aaPredicted RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms