RNA–Protein interactions for RNA: ENST00000396128.8

KLHL28-202, Transcript of kelch like family member 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLHL28, Length 6,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28-202ENST00000396128 CFAP53Q96M91 514 aa7.98□□□□□ -1.13
KLHL28-202ENST00000396128 KANK1Q14678 1352 aa7.97□□□□□ -1.13
KLHL28-202ENST00000396128 EIF5BO60841 1220 aaKnown RBP7.97□□□□□ -1.13
KLHL28-202ENST00000396128 KIF27Q86VH2 1401 aa7.96□□□□□ -1.13
KLHL28-202ENST00000396128 TMC1Q8TDI8 760 aa7.96□□□□□ -1.13
KLHL28-202ENST00000396128 KDM2AQ9Y2K7 1162 aa7.96□□□□□ -1.14
KLHL28-202ENST00000396128 NPHP1O15259 732 aa7.95□□□□□ -1.14
KLHL28-202ENST00000396128 CFDP1Q9UEE9 299 aaPredicted RBP7.95□□□□□ -1.14
KLHL28-202ENST00000396128 EIF4G2P78344 907 aaKnown RBP eCLIP7.94□□□□□ -1.14
KLHL28-202ENST00000396128 CLIP1P30622 1438 aa7.94□□□□□ -1.14
KLHL28-202ENST00000396128 GOLGA3Q08378 1498 aa7.93□□□□□ -1.14
KLHL28-202ENST00000396128 POGKQ9P215 609 aa7.92□□□□□ -1.14
KLHL28-202ENST00000396128 PNNQ9H307 717 aaKnown RBP7.92□□□□□ -1.14
KLHL28-202ENST00000396128 PLEKHG5O94827 1062 aa7.91□□□□□ -1.14
KLHL28-202ENST00000396128 ARXQ96QS3 562 aa7.9□□□□□ -1.14
KLHL28-202ENST00000396128 PDS5BQ9NTI5 1447 aa7.9□□□□□ -1.14
KLHL28-202ENST00000396128 LMOD2Q6P5Q4 547 aa7.9□□□□□ -1.15
KLHL28-202ENST00000396128 NUDCQ9Y266 331 aa7.9□□□□□ -1.15
KLHL28-202ENST00000396128 WRNQ14191 1432 aaPredicted RBP eCLIP7.89□□□□□ -1.15
KLHL28-202ENST00000396128 CARMIL2Q6F5E8 1435 aa7.89□□□□□ -1.15
KLHL28-202ENST00000396128 CHMP4BQ9H444 224 aaKnown RBP7.88□□□□□ -1.15
KLHL28-202ENST00000396128 CASC1Q6TDU7 716 aa7.88□□□□□ -1.15
KLHL28-202ENST00000396128 FAM9BQ8IZU0 186 aa7.88□□□□□ -1.15
KLHL28-202ENST00000396128 BAZ1AQ9NRL2 1556 aaPredicted RBP7.88□□□□□ -1.15
KLHL28-202ENST00000396128 CCNB3Q8WWL7 1395 aa7.87□□□□□ -1.15
KLHL28-202ENST00000396128 RRP7BPQ9NSQ0 103 aa7.87□□□□□ -1.15
KLHL28-202ENST00000396128 KNSTRNQ9Y448 316 aa7.87□□□□□ -1.15
KLHL28-202ENST00000396128 MAPK8IP3Q9UPT6 1336 aa7.87□□□□□ -1.15
KLHL28-202ENST00000396128 EIF4G1Q04637 1599 aaKnown RBP7.86□□□□□ -1.15
KLHL28-202ENST00000396128 HNRNPUQ00839 825 aaKnown RBP eCLIP7.86□□□□□ -1.15
KLHL28-202ENST00000396128 CEP164Q9UPV0 1460 aa7.85□□□□□ -1.15
KLHL28-202ENST00000396128 FHAD1B1AJZ9 1412 aa7.85□□□□□ -1.15
KLHL28-202ENST00000396128 NCLP19338 710 aaKnown RBP7.85□□□□□ -1.15
KLHL28-202ENST00000396128 TMX4Q9H1E5 349 aaPredicted RBP7.84□□□□□ -1.15
KLHL28-202ENST00000396128 GOLGA2Q08379 1002 aa7.84□□□□□ -1.15
KLHL28-202ENST00000396128 MRS2Q9HD23 443 aa7.84□□□□□ -1.15
KLHL28-202ENST00000396128 RGL3Q3MIN7 710 aa7.84□□□□□ -1.16
KLHL28-202ENST00000396128 SMARCA2P51531 1590 aa7.83□□□□□ -1.16
KLHL28-202ENST00000396128 PPM1GO15355 546 aaPredicted RBP7.82□□□□□ -1.16
KLHL28-202ENST00000396128 SALL2Q9Y467 1007 aaPredicted RBP7.82□□□□□ -1.16
KLHL28-202ENST00000396128 MS4A1P11836 297 aa7.82□□□□□ -1.16
KLHL28-202ENST00000396128 MLECQ14165 292 aa7.82□□□□□ -1.16
KLHL28-202ENST00000396128 SENP3Q9H4L4 574 aaPredicted RBP7.82□□□□□ -1.16
KLHL28-202ENST00000396128 DDX10Q13206 875 aaKnown RBP7.82□□□□□ -1.16
KLHL28-202ENST00000396128 ZRSR1Q15695 479 aaKnown RBP7.81□□□□□ -1.16
KLHL28-202ENST00000396128 CCDC136Q96JN2 1154 aa7.81□□□□□ -1.16
KLHL28-202ENST00000396128 AEBP2Q6ZN18 517 aaPredicted RBP7.81□□□□□ -1.16
KLHL28-202ENST00000396128 CARD11Q9BXL7 1154 aa7.81□□□□□ -1.16
KLHL28-202ENST00000396128 DCAF1Q9Y4B6 1507 aa7.8□□□□□ -1.16
KLHL28-202ENST00000396128 CHMP4AQ9BY43 222 aa7.8□□□□□ -1.16
KLHL28-202ENST00000396128 EID1Q9Y6B2 187 aa7.79□□□□□ -1.16
KLHL28-202ENST00000396128 FTSJ3Q8IY81 847 aaKnown RBP7.79□□□□□ -1.16
KLHL28-202ENST00000396128 BECN1Q14457 450 aa7.79□□□□□ -1.16
KLHL28-202ENST00000396128 CARMIL1Q5VZK9 1371 aa7.78□□□□□ -1.16
KLHL28-202ENST00000396128 GOLGA6L22H0YM25 854 aa7.78□□□□□ -1.16
KLHL28-202ENST00000396128 OS9Q13438 667 aaPredicted RBP7.78□□□□□ -1.16
KLHL28-202ENST00000396128 HDGFL2Q7Z4V5 671 aaPredicted RBP7.78□□□□□ -1.16
KLHL28-202ENST00000396128 CUX2O14529 1486 aa7.77□□□□□ -1.16
KLHL28-202ENST00000396128 GTF3C3Q9Y5Q9 886 aa7.77□□□□□ -1.17
KLHL28-202ENST00000396128 TMF1P82094 1093 aa7.77□□□□□ -1.17
KLHL28-202ENST00000396128 ANP32EQ9BTT0 268 aa7.77□□□□□ -1.17
KLHL28-202ENST00000396128 EFCAB2Q5VUJ9 269 aa7.77□□□□□ -1.17
KLHL28-202ENST00000396128 DDRGK1Q96HY6 314 aa7.76□□□□□ -1.17
KLHL28-202ENST00000396128 SRPK2P78362 688 aaKnown RBP7.76□□□□□ -1.17
KLHL28-202ENST00000396128 LAS1LQ9Y4W2 734 aaKnown RBP7.76□□□□□ -1.17
KLHL28-202ENST00000396128 CEP162Q5TB80 1403 aa7.76□□□□□ -1.17
KLHL28-202ENST00000396128 RTF1Q92541 710 aaKnown RBP7.75□□□□□ -1.17
KLHL28-202ENST00000396128 TNIKQ9UKE5 1360 aa7.75□□□□□ -1.17
KLHL28-202ENST00000396128 CSB-PGBD3P0DP91 1061 aa7.75□□□□□ -1.17
KLHL28-202ENST00000396128 FKBP8Q14318 412 aa7.75□□□□□ -1.17
KLHL28-202ENST00000396128 CECR2Q9BXF3 1484 aa7.75□□□□□ -1.17
KLHL28-202ENST00000396128 CFAP44Q96MT7 982 aa7.75□□□□□ -1.17
KLHL28-202ENST00000396128 CCDC9Q9Y3X0 531 aaKnown RBP7.75□□□□□ -1.17
KLHL28-202ENST00000396128 GGT6Q6P531 493 aa7.74□□□□□ -1.17
KLHL28-202ENST00000396128 SOGA1O94964 1423 aa7.73□□□□□ -1.17
KLHL28-202ENST00000396128 CALD1Q05682 793 aaKnown RBP7.73□□□□□ -1.17
KLHL28-202ENST00000396128 EIF3AQ14152 1382 aaKnown RBP7.73□□□□□ -1.17
KLHL28-202ENST00000396128 U2SURPO15042 1029 aaKnown RBP7.72□□□□□ -1.17
KLHL28-202ENST00000396128 RSPH4AQ5TD94 716 aa7.72□□□□□ -1.17
KLHL28-202ENST00000396128 FGD1P98174 961 aa7.71□□□□□ -1.17
KLHL28-202ENST00000396128 GOLGA6L6A8MZA4 724 aa7.71□□□□□ -1.18
KLHL28-202ENST00000396128 PAK3O75914 559 aaPredicted RBP7.71□□□□□ -1.18
KLHL28-202ENST00000396128 FMN1Q68DA7 1419 aa7.7□□□□□ -1.18
KLHL28-202ENST00000396128 ARHGAP35Q9NRY4 1499 aa7.7□□□□□ -1.18
KLHL28-202ENST00000396128 HDAC5Q9UQL6 1122 aa7.7□□□□□ -1.18
KLHL28-202ENST00000396128 TULP1O00294 542 aaPredicted RBP7.7□□□□□ -1.18
KLHL28-202ENST00000396128 MORC1Q86VD1 984 aa7.7□□□□□ -1.18
KLHL28-202ENST00000396128 KCNJ4P48050 445 aa7.69□□□□□ -1.18
KLHL28-202ENST00000396128 ABCC8Q09428 1581 aa7.69□□□□□ -1.18
KLHL28-202ENST00000396128 DCAF8L1A6NGE4 600 aa7.69□□□□□ -1.18
KLHL28-202ENST00000396128 G3V3G9 751 aa7.69□□□□□ -1.18
KLHL28-202ENST00000396128 DCAF8Q5TAQ9 597 aa7.69□□□□□ -1.18
KLHL28-202ENST00000396128 ANKRD30AQ9BXX3 1397 aa7.69□□□□□ -1.18
KLHL28-202ENST00000396128 MCCP23508 829 aa7.68□□□□□ -1.18
KLHL28-202ENST00000396128 DCAF11Q8TEB1 546 aa7.68□□□□□ -1.18
KLHL28-202ENST00000396128 OSCARQ8IYS5 282 aa7.67□□□□□ -1.18
KLHL28-202ENST00000396128 ISY1Q9ULR0 285 aaKnown RBP7.67□□□□□ -1.18
KLHL28-202ENST00000396128 MEX3CQ5U5Q3 659 aaKnown RBP7.67□□□□□ -1.18
KLHL28-202ENST00000396128 SPAG9O60271 1321 aaKnown RBP7.66□□□□□ -1.18
KLHL28-202ENST00000396128 FOXD1Q16676 465 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms