RNA–Protein interactions for RNA: ENST00000395218.3

PTK2-202, Transcript of protein tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene PTK2, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-202ENST00000395218 RAPGEF2Q9Y4G8 1499 aa18.88■□□□□ 0.61
PTK2-202ENST00000395218 KCNH8Q96L42 1107 aa18.88■□□□□ 0.61
PTK2-202ENST00000395218 CCNB3Q8WWL7 1395 aa18.87■□□□□ 0.61
PTK2-202ENST00000395218 CUX2O14529 1486 aa18.87■□□□□ 0.61
PTK2-202ENST00000395218 NPM2Q86SE8 214 aaKnown RBP18.87■□□□□ 0.61
PTK2-202ENST00000395218 FOXD1Q16676 465 aa18.85■□□□□ 0.61
PTK2-202ENST00000395218 CARMIL1Q5VZK9 1371 aa18.82■□□□□ 0.6
PTK2-202ENST00000395218 TOP2AP11388 1531 aaKnown RBP18.8■□□□□ 0.6
PTK2-202ENST00000395218 SUPT16HQ9Y5B9 1047 aaKnown RBP18.8■□□□□ 0.6
PTK2-202ENST00000395218 RGL3Q3MIN7 710 aa18.78■□□□□ 0.6
PTK2-202ENST00000395218 CHMP7Q8WUX9 453 aaPredicted RBP18.78■□□□□ 0.6
PTK2-202ENST00000395218 EIF4G2P78344 907 aaKnown RBP eCLIP18.76■□□□□ 0.591e-6■■■■□ 21.9
PTK2-202ENST00000395218 RTL5Q5HYW3 569 aaPredicted RBP18.75■□□□□ 0.59
PTK2-202ENST00000395218 CHGAP10645 457 aaKnown RBP18.74■□□□□ 0.59
PTK2-202ENST00000395218 TMC1Q8TDI8 760 aa18.73■□□□□ 0.59
PTK2-202ENST00000395218 RAB3GAP2Q9H2M9 1393 aa18.72■□□□□ 0.59
PTK2-202ENST00000395218 TDRD9Q8NDG6 1382 aaKnown RBP18.72■□□□□ 0.59
PTK2-202ENST00000395218 SMARCA4P51532 1647 aa18.69■□□□□ 0.58
PTK2-202ENST00000395218 TSPY4P0CV99 314 aa18.67■□□□□ 0.58
PTK2-202ENST00000395218 TSPY10P0CW01 314 aa18.67■□□□□ 0.58
PTK2-202ENST00000395218 ATAD2BQ9ULI0 1458 aa18.66■□□□□ 0.58
PTK2-202ENST00000395218 NBR1Q14596 966 aa18.65■□□□□ 0.58
PTK2-202ENST00000395218 CCDC136Q96JN2 1154 aa18.64■□□□□ 0.57
PTK2-202ENST00000395218 CFDP1Q9UEE9 299 aaPredicted RBP18.64■□□□□ 0.57
PTK2-202ENST00000395218 SMARCA2P51531 1590 aa18.62■□□□□ 0.57
PTK2-202ENST00000395218 FHOD3Q2V2M9 1422 aa18.61■□□□□ 0.57
PTK2-202ENST00000395218 DHX57Q6P158 1386 aaKnown RBP18.61■□□□□ 0.57
PTK2-202ENST00000395218 SETD5Q9C0A6 1442 aa18.59■□□□□ 0.57
PTK2-202ENST00000395218 EIF4G1Q04637 1599 aaKnown RBP18.59■□□□□ 0.57
PTK2-202ENST00000395218 CANXP27824 592 aaKnown RBP18.58■□□□□ 0.57
PTK2-202ENST00000395218 B4GALNT3Q6L9W6 998 aa18.56■□□□□ 0.56
PTK2-202ENST00000395218 HSPA5P11021 654 aaKnown RBP18.55■□□□□ 0.56
PTK2-202ENST00000395218 PLPPR3Q6T4P5 718 aa18.54■□□□□ 0.56
PTK2-202ENST00000395218 PLEKHD1A6NEE1 506 aa18.53■□□□□ 0.56
PTK2-202ENST00000395218 ANP32AP39687 249 aaKnown RBP18.53■□□□□ 0.56
PTK2-202ENST00000395218 CARD11Q9BXL7 1154 aa18.51■□□□□ 0.55
PTK2-202ENST00000395218 PPP1R15AO75807 674 aaPredicted RBP18.5■□□□□ 0.55
PTK2-202ENST00000395218 FHAD1B1AJZ9 1412 aa18.5■□□□□ 0.55
PTK2-202ENST00000395218 ARHGAP35Q9NRY4 1499 aa18.44■□□□□ 0.54
PTK2-202ENST00000395218 DCAF11Q8TEB1 546 aa18.43■□□□□ 0.54
PTK2-202ENST00000395218 SLC24A1O60721 1099 aa18.43■□□□□ 0.54
PTK2-202ENST00000395218 L3MBTL2Q969R5 705 aa18.42■□□□□ 0.54
PTK2-202ENST00000395218 CADPSQ9ULU8 1353 aa18.42■□□□□ 0.54
PTK2-202ENST00000395218 CC2D1BQ5T0F9 858 aaKnown RBP18.42■□□□□ 0.54
PTK2-202ENST00000395218 MPHOSPH9Q99550 1183 aa18.41■□□□□ 0.54
PTK2-202ENST00000395218 TSHZ2Q9NRE2 1034 aa18.4■□□□□ 0.54
PTK2-202ENST00000395218 PKD2Q13563 968 aa18.39■□□□□ 0.53
PTK2-202ENST00000395218 SYNJ1O43426 1573 aa18.38■□□□□ 0.53
PTK2-202ENST00000395218 IGF1RP08069 1367 aa18.38■□□□□ 0.53
PTK2-202ENST00000395218 WDR43Q15061 677 aaKnown RBP eCLIP18.36■□□□□ 0.53
PTK2-202ENST00000395218 KIF21BO75037 1637 aa18.36■□□□□ 0.53
PTK2-202ENST00000395218 TNNT2P45379 298 aaPredicted RBP18.35■□□□□ 0.53
PTK2-202ENST00000395218 NEUROD2Q15784 382 aa18.35■□□□□ 0.53
PTK2-202ENST00000395218 RBM19Q9Y4C8 960 aaKnown RBP18.35■□□□□ 0.53
PTK2-202ENST00000395218 ARXQ96QS3 562 aa18.35■□□□□ 0.53
PTK2-202ENST00000395218 RAD54L2Q9Y4B4 1467 aa18.34■□□□□ 0.53
PTK2-202ENST00000395218 ANP32EQ9BTT0 268 aa18.34■□□□□ 0.53
PTK2-202ENST00000395218 PHLDB1Q86UU1 1377 aa18.33■□□□□ 0.53
PTK2-202ENST00000395218 ARAP1Q96P48 1450 aa18.33■□□□□ 0.53
PTK2-202ENST00000395218 ZBTB47Q9UFB7 747 aaPredicted RBP18.33■□□□□ 0.52
PTK2-202ENST00000395218 STAG3Q9UJ98 1225 aa18.29■□□□□ 0.52
PTK2-202ENST00000395218 ZNF644Q9H582 1327 aaPredicted RBP18.28■□□□□ 0.52
PTK2-202ENST00000395218 CCER2I3L3R5 266 aa18.27■□□□□ 0.52
PTK2-202ENST00000395218 PPP4R2Q9NY27 417 aa18.26■□□□□ 0.51
PTK2-202ENST00000395218 ERCC6Q03468 1493 aa18.25■□□□□ 0.51
PTK2-202ENST00000395218 PLEKHG5O94827 1062 aa18.25■□□□□ 0.51
PTK2-202ENST00000395218 HNRNPMP52272 730 aaKnown RBP eCLIP18.25■□□□□ 0.511e-6■■■■□ 24
PTK2-202ENST00000395218 TIMELESSQ9UNS1 1208 aa18.25■□□□□ 0.51
PTK2-202ENST00000395218 FGD5Q6ZNL6 1462 aa18.24■□□□□ 0.51
PTK2-202ENST00000395218 NPM1P06748 294 aaKnown RBP eCLIP18.24■□□□□ 0.51
PTK2-202ENST00000395218 FMN1Q68DA7 1419 aa18.23■□□□□ 0.51
PTK2-202ENST00000395218 FANCD2Q9BXW9 1451 aa18.22■□□□□ 0.51
PTK2-202ENST00000395218 LAS1LQ9Y4W2 734 aaKnown RBP18.22■□□□□ 0.51
PTK2-202ENST00000395218 DNAJC5BQ9UF47 199 aa18.21■□□□□ 0.51
PTK2-202ENST00000395218 KNSTRNQ9Y448 316 aa18.2■□□□□ 0.5
PTK2-202ENST00000395218 RGS3P49796 1198 aa18.2■□□□□ 0.5
PTK2-202ENST00000395218 NUP155O75694 1391 aa18.2■□□□□ 0.5
PTK2-202ENST00000395218 SAFB2Q14151 953 aaKnown RBP eCLIP18.18■□□□□ 0.5
PTK2-202ENST00000395218 NEFMP07197 916 aa18.16■□□□□ 0.5
PTK2-202ENST00000395218 PPM1GO15355 546 aaPredicted RBP18.16■□□□□ 0.5
PTK2-202ENST00000395218 NESP48681 1621 aa18.12■□□□□ 0.49
PTK2-202ENST00000395218 PDS5BQ9NTI5 1447 aa18.12■□□□□ 0.49
PTK2-202ENST00000395218 FRAT1Q92837 279 aaPredicted RBP18.12■□□□□ 0.49
PTK2-202ENST00000395218 ST20-MTHFSA0A0A6YYL1 179 aa18.12■□□□□ 0.49
PTK2-202ENST00000395218 CCDC18Q5T9S5 1454 aa18.11■□□□□ 0.49
PTK2-202ENST00000395218 JPH4Q96JJ6 628 aa18.09■□□□□ 0.49
PTK2-202ENST00000395218 PRKRIP1Q9H875 184 aaPredicted RBP18.08■□□□□ 0.49
PTK2-202ENST00000395218 RTN4Q9NQC3 1192 aaKnown RBP18.08■□□□□ 0.49
PTK2-202ENST00000395218 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.07■□□□□ 0.48
PTK2-202ENST00000395218 LRRC9Q6ZRR7 1453 aa18.07■□□□□ 0.48
PTK2-202ENST00000395218 ESF1Q9H501 851 aaKnown RBP18.07■□□□□ 0.48
PTK2-202ENST00000395218 CCDC184Q52MB2 194 aa18.06■□□□□ 0.48
PTK2-202ENST00000395218 NUTM2DQ5VT03 806 aaPredicted RBP18.06■□□□□ 0.48
PTK2-202ENST00000395218 PRXQ9BXM0 1461 aa18.06■□□□□ 0.48
PTK2-202ENST00000395218 EIF5BO60841 1220 aaKnown RBP18.06■□□□□ 0.48
PTK2-202ENST00000395218 CUX1P39880 1505 aa18.06■□□□□ 0.48
PTK2-202ENST00000395218 AQRO60306 1485 aaKnown RBP eCLIP18.05■□□□□ 0.482e-6■■■■□ 24.7
PTK2-202ENST00000395218 GGT6Q6P531 493 aa18.04■□□□□ 0.48
PTK2-202ENST00000395218 FGD6Q6ZV73 1430 aa18.03■□□□□ 0.48
PTK2-202ENST00000395218 NCAPD3P42695 1498 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms