RNA–Protein interactions for RNA: ENST00000394435.2

PRDM5-202, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,492 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-202ENST00000394435 LRRC9Q6ZRR7 1453 aa24.53■■□□□ 1.52
PRDM5-202ENST00000394435 FHAD1B1AJZ9 1412 aa24.52■■□□□ 1.52
PRDM5-202ENST00000394435 PCF11O94913 1555 aaKnown RBP24.5■■□□□ 1.51
PRDM5-202ENST00000394435 LAMC3Q9Y6N6 1575 aa24.5■■□□□ 1.51
PRDM5-202ENST00000394435 URB2Q14146 1524 aaKnown RBP24.49■■□□□ 1.51
PRDM5-202ENST00000394435 MIER1Q8N108 512 aa24.49■■□□□ 1.51
PRDM5-202ENST00000394435 CUL7Q14999 1698 aa24.49■■□□□ 1.51
PRDM5-202ENST00000394435 FHOD3Q2V2M9 1422 aa24.48■■□□□ 1.51
PRDM5-202ENST00000394435 ATP1B4Q9UN42 357 aaPredicted RBP24.47■■□□□ 1.51
PRDM5-202ENST00000394435 CFAP43Q8NDM7 1665 aa24.47■■□□□ 1.51
PRDM5-202ENST00000394435 PHLDB1Q86UU1 1377 aa24.45■■□□□ 1.5
PRDM5-202ENST00000394435 WDR97A6NE52 1622 aa24.44■■□□□ 1.5
PRDM5-202ENST00000394435 CTTNBP2Q8WZ74 1663 aa24.43■■□□□ 1.5
PRDM5-202ENST00000394435 EFCAB5A4FU69 1503 aa24.42■■□□□ 1.5
PRDM5-202ENST00000394435 RAB3GAP2Q9H2M9 1393 aa24.41■■□□□ 1.5
PRDM5-202ENST00000394435 DNAJC5BQ9UF47 199 aa24.4■■□□□ 1.5
PRDM5-202ENST00000394435 YTHDC1Q96MU7 727 aaKnown RBP24.39■■□□□ 1.5
PRDM5-202ENST00000394435 GTF3C3Q9Y5Q9 886 aa24.38■■□□□ 1.49
PRDM5-202ENST00000394435 TDRD9Q8NDG6 1382 aaKnown RBP24.38■■□□□ 1.49
PRDM5-202ENST00000394435 FYCO1Q9BQS8 1478 aa24.37■■□□□ 1.49
PRDM5-202ENST00000394435 FAM50AQ14320 339 aaKnown RBP24.37■■□□□ 1.49
PRDM5-202ENST00000394435 CASKIN1Q8WXD9 1431 aa24.35■■□□□ 1.49
PRDM5-202ENST00000394435 ABCA5Q8WWZ7 1642 aa24.34■■□□□ 1.49
PRDM5-202ENST00000394435 PDS5BQ9NTI5 1447 aa24.34■■□□□ 1.49
PRDM5-202ENST00000394435 SETD5Q9C0A6 1442 aa24.32■■□□□ 1.48
PRDM5-202ENST00000394435 AQRO60306 1485 aaKnown RBP eCLIP24.32■■□□□ 1.48
PRDM5-202ENST00000394435 GAPVD1Q14C86 1478 aa24.31■■□□□ 1.48
PRDM5-202ENST00000394435 KIF21AQ7Z4S6 1674 aa24.3■■□□□ 1.48
PRDM5-202ENST00000394435 MAPKBP1O60336 1514 aa24.29■■□□□ 1.48
PRDM5-202ENST00000394435 FMN1Q68DA7 1419 aa24.26■■□□□ 1.47
PRDM5-202ENST00000394435 SNAPC4Q5SXM2 1469 aa24.23■■□□□ 1.47
PRDM5-202ENST00000394435 SAMD9Q5K651 1589 aa24.21■■□□□ 1.47
PRDM5-202ENST00000394435 TARBP1Q13395 1621 aaKnown RBP24.18■■□□□ 1.46
PRDM5-202ENST00000394435 LRRIQ1Q96JM4 1722 aa24.15■■□□□ 1.46
PRDM5-202ENST00000394435 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.15■■□□□ 1.46
PRDM5-202ENST00000394435 MTUS2Q5JR59 1369 aa24.14■■□□□ 1.45
PRDM5-202ENST00000394435 FGD6Q6ZV73 1430 aa24.12■■□□□ 1.45
PRDM5-202ENST00000394435 SIN3AQ96ST3 1273 aa24.12■■□□□ 1.45
PRDM5-202ENST00000394435 GRIN2BQ13224 1484 aa24.11■■□□□ 1.45
PRDM5-202ENST00000394435 PBRM1Q86U86 1689 aa24.07■■□□□ 1.44
PRDM5-202ENST00000394435 PELP1Q8IZL8 1130 aaKnown RBP24.07■■□□□ 1.44
PRDM5-202ENST00000394435 NCOA2Q15596 1464 aa24.04■■□□□ 1.44
PRDM5-202ENST00000394435 THOC2Q8NI27 1593 aaKnown RBP24.03■■□□□ 1.44
PRDM5-202ENST00000394435 PTPRKQ15262 1439 aa24.01■■□□□ 1.43
PRDM5-202ENST00000394435 SUPT6HQ7KZ85 1726 aaKnown RBP24■■□□□ 1.43
PRDM5-202ENST00000394435 MRC2Q9UBG0 1479 aa23.99■■□□□ 1.43
PRDM5-202ENST00000394435 MYOM3Q5VTT5 1437 aa23.99■■□□□ 1.43
PRDM5-202ENST00000394435 EHBP1L1Q8N3D4 1523 aa23.99■■□□□ 1.43
PRDM5-202ENST00000394435 ADAMTS12P58397 1594 aa23.97■■□□□ 1.43
PRDM5-202ENST00000394435 IQGAP2Q13576 1575 aa23.95■■□□□ 1.43
PRDM5-202ENST00000394435 CCDC18Q5T9S5 1454 aa23.95■■□□□ 1.42
PRDM5-202ENST00000394435 MAGI3Q5TCQ9 1506 aa23.95■■□□□ 1.42
PRDM5-202ENST00000394435 HFM1A2PYH4 1435 aa23.93■■□□□ 1.42
PRDM5-202ENST00000394435 TIMELESSQ9UNS1 1208 aa23.93■■□□□ 1.42
PRDM5-202ENST00000394435 PTPN23Q9H3S7 1636 aa23.92■■□□□ 1.42
PRDM5-202ENST00000394435 UGGT2Q9NYU1 1516 aa23.92■■□□□ 1.42
PRDM5-202ENST00000394435 HECW1Q76N89 1606 aa23.9■■□□□ 1.42
PRDM5-202ENST00000394435 ARHGEF11O15085 1522 aa23.9■■□□□ 1.42
PRDM5-202ENST00000394435 PPP1R15AO75807 674 aaPredicted RBP23.88■■□□□ 1.41
PRDM5-202ENST00000394435 NAIPQ13075 1403 aa23.88■■□□□ 1.41
PRDM5-202ENST00000394435 UACAQ9BZF9 1416 aa23.87■■□□□ 1.41
PRDM5-202ENST00000394435 ZNF608Q9ULD9 1512 aaPredicted RBP23.87■■□□□ 1.41
PRDM5-202ENST00000394435 EPRSP07814 1512 aaKnown RBP23.85■■□□□ 1.41
PRDM5-202ENST00000394435 IFT140Q96RY7 1462 aa23.83■■□□□ 1.41
PRDM5-202ENST00000394435 CDK13Q14004 1512 aaKnown RBP23.83■■□□□ 1.4
PRDM5-202ENST00000394435 ARID3CA6NKF2 412 aa23.82■■□□□ 1.4
PRDM5-202ENST00000394435 DDX10Q13206 875 aaKnown RBP23.81■■□□□ 1.4
PRDM5-202ENST00000394435 WDR62O43379 1518 aa23.8■■□□□ 1.4
PRDM5-202ENST00000394435 TONSLQ96HA7 1378 aa23.8■■□□□ 1.4
PRDM5-202ENST00000394435 TCOF1Q13428 1488 aaKnown RBP23.79■■□□□ 1.4
PRDM5-202ENST00000394435 HIRIP3Q9BW71 556 aaPredicted RBP23.79■■□□□ 1.4
PRDM5-202ENST00000394435 RRP7BPQ9NSQ0 103 aa23.78■■□□□ 1.4
PRDM5-202ENST00000394435 CHIC2Q9UKJ5 165 aa23.78■■□□□ 1.4
PRDM5-202ENST00000394435 KCNH8Q96L42 1107 aa23.77■■□□□ 1.4
PRDM5-202ENST00000394435 KIAA0586Q9BVV6 1533 aa23.72■■□□□ 1.39
PRDM5-202ENST00000394435 GCC2Q8IWJ2 1684 aa23.71■■□□□ 1.39
PRDM5-202ENST00000394435 KIAA0556O60303 1618 aa23.7■■□□□ 1.38
PRDM5-202ENST00000394435 DISP1Q96F81 1524 aa23.7■■□□□ 1.38
PRDM5-202ENST00000394435 MIA2Q96PC5 1412 aa23.69■■□□□ 1.38
PRDM5-202ENST00000394435 EIF4G3O43432 1585 aaKnown RBP23.69■■□□□ 1.38
PRDM5-202ENST00000394435 GRIN2AQ12879 1464 aa23.67■■□□□ 1.38
PRDM5-202ENST00000394435 KDM6BO15054 1643 aa23.67■■□□□ 1.38
PRDM5-202ENST00000394435 TRIM52Q96A61 297 aa23.66■■□□□ 1.38
PRDM5-202ENST00000394435 AKNAQ7Z591 1439 aa23.64■■□□□ 1.37
PRDM5-202ENST00000394435 DENND4BO75064 1496 aaPredicted RBP23.62■■□□□ 1.37
PRDM5-202ENST00000394435 NUP153P49790 1475 aaKnown RBP23.62■■□□□ 1.37
PRDM5-202ENST00000394435 KDM5BQ9UGL1 1544 aa23.62■■□□□ 1.37
PRDM5-202ENST00000394435 ERCC6Q03468 1493 aa23.61■■□□□ 1.37
PRDM5-202ENST00000394435 RAPGEF6Q8TEU7 1601 aa23.61■■□□□ 1.37
PRDM5-202ENST00000394435 SUPT16HQ9Y5B9 1047 aaKnown RBP23.56■■□□□ 1.36
PRDM5-202ENST00000394435 DAPK1P53355 1430 aa23.55■■□□□ 1.36
PRDM5-202ENST00000394435 MPHOSPH9Q99550 1183 aa23.55■■□□□ 1.36
PRDM5-202ENST00000394435 CHMP7Q8WUX9 453 aaPredicted RBP23.54■■□□□ 1.36
PRDM5-202ENST00000394435 ZNF644Q9H582 1327 aaPredicted RBP23.54■■□□□ 1.36
PRDM5-202ENST00000394435 ANP32CO43423 234 aa23.54■■□□□ 1.36
PRDM5-202ENST00000394435 MAGI1Q96QZ7 1491 aaPredicted RBP23.53■■□□□ 1.36
PRDM5-202ENST00000394435 CEP170Q5SW79 1584 aa23.53■■□□□ 1.36
PRDM5-202ENST00000394435 CDK11AQ9UQ88 783 aaPredicted RBP23.52■■□□□ 1.36
PRDM5-202ENST00000394435 ABCC5O15440 1437 aa23.52■■□□□ 1.36
PRDM5-202ENST00000394435 DNMT1P26358 1616 aaKnown RBP23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms