RNA–Protein interactions for RNA: ENST00000393243.5

GSE1-202, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 7,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-202ENST00000393243 MIER1Q8N108 512 aa17.86■□□□□ 0.45
GSE1-202ENST00000393243 RTN4Q9NQC3 1192 aaKnown RBP17.86■□□□□ 0.45
GSE1-202ENST00000393243 MYH16Q9H6N6 1097 aa17.82■□□□□ 0.44
GSE1-202ENST00000393243 TRIM44Q96DX7 344 aaPredicted RBP17.81■□□□□ 0.44
GSE1-202ENST00000393243 DNTTIP2Q5QJE6 756 aaKnown RBP17.73■□□□□ 0.43
GSE1-202ENST00000393243 PTMAP06454 111 aaKnown RBP17.72■□□□□ 0.43
GSE1-202ENST00000393243 PPM1GO15355 546 aaPredicted RBP17.71■□□□□ 0.43
GSE1-202ENST00000393243 LAS1LQ9Y4W2 734 aaKnown RBP17.71■□□□□ 0.43
GSE1-202ENST00000393243 NPM1P06748 294 aaKnown RBP eCLIP17.7■□□□□ 0.425e-8■■■■■ 57.5
GSE1-202ENST00000393243 PLCB2Q00722 1185 aa17.68■□□□□ 0.42
GSE1-202ENST00000393243 RRP7BPQ9NSQ0 103 aa17.68■□□□□ 0.42
GSE1-202ENST00000393243 BECN1Q14457 450 aa17.68■□□□□ 0.42
GSE1-202ENST00000393243 RGL3Q3MIN7 710 aa17.67■□□□□ 0.42
GSE1-202ENST00000393243 NEUROD2Q15784 382 aa17.67■□□□□ 0.42
GSE1-202ENST00000393243 AMER1Q5JTC6 1135 aaPredicted RBP17.66■□□□□ 0.42
GSE1-202ENST00000393243 NAP1L5Q96NT1 182 aaPredicted RBP17.65■□□□□ 0.42
GSE1-202ENST00000393243 SUPT16HQ9Y5B9 1047 aaKnown RBP17.64■□□□□ 0.41
GSE1-202ENST00000393243 DDRGK1Q96HY6 314 aa17.63■□□□□ 0.41
GSE1-202ENST00000393243 NCBP3Q53F19 620 aaKnown RBP17.61■□□□□ 0.41
GSE1-202ENST00000393243 ZRSR1Q15695 479 aaKnown RBP17.61■□□□□ 0.41
GSE1-202ENST00000393243 GOLGA6L22H0YM25 854 aa17.6■□□□□ 0.41
GSE1-202ENST00000393243 RGS3P49796 1198 aa17.59■□□□□ 0.41
GSE1-202ENST00000393243 TSPY4P0CV99 314 aa17.58■□□□□ 0.41
GSE1-202ENST00000393243 TSPY10P0CW01 314 aa17.58■□□□□ 0.41
GSE1-202ENST00000393243 PPP1R15AO75807 674 aaPredicted RBP17.58■□□□□ 0.4
GSE1-202ENST00000393243 KCNH8Q96L42 1107 aa17.58■□□□□ 0.4
GSE1-202ENST00000393243 TNNT2P45379 298 aaPredicted RBP17.57■□□□□ 0.4
GSE1-202ENST00000393243 HAP1P54257 671 aaPredicted RBP17.57■□□□□ 0.4
GSE1-202ENST00000393243 EIF4G2P78344 907 aaKnown RBP eCLIP17.56■□□□□ 0.41e-6■■■□□ 15.1
GSE1-202ENST00000393243 FTSJ3Q8IY81 847 aaKnown RBP17.56■□□□□ 0.4
GSE1-202ENST00000393243 ARID4BQ4LE39 1312 aaPredicted RBP17.55■□□□□ 0.4
GSE1-202ENST00000393243 SPRYD3Q8NCJ5 442 aa17.54■□□□□ 0.4
GSE1-202ENST00000393243 NAP1L2Q9ULW6 460 aaPredicted RBP17.54■□□□□ 0.4
GSE1-202ENST00000393243 FRAT1Q92837 279 aaPredicted RBP17.53■□□□□ 0.4
GSE1-202ENST00000393243 LMOD2Q6P5Q4 547 aa17.51■□□□□ 0.39
GSE1-202ENST00000393243 MTUS2Q5JR59 1369 aa17.51■□□□□ 0.39
GSE1-202ENST00000393243 CASC1Q6TDU7 716 aa17.49■□□□□ 0.39
GSE1-202ENST00000393243 ANP32EQ9BTT0 268 aa17.49■□□□□ 0.39
GSE1-202ENST00000393243 SCRIBQ14160 1630 aa17.45■□□□□ 0.38
GSE1-202ENST00000393243 NPHP1O15259 732 aa17.45■□□□□ 0.38
GSE1-202ENST00000393243 CC2D1BQ5T0F9 858 aaKnown RBP17.45■□□□□ 0.38
GSE1-202ENST00000393243 HSP90AB1P08238 724 aaKnown RBP17.45■□□□□ 0.38
GSE1-202ENST00000393243 ARID3AQ99856 593 aa17.44■□□□□ 0.38
GSE1-202ENST00000393243 B4GALNT3Q6L9W6 998 aa17.44■□□□□ 0.38
GSE1-202ENST00000393243 KNSTRNQ9Y448 316 aa17.43■□□□□ 0.38
GSE1-202ENST00000393243 OS9Q13438 667 aaPredicted RBP17.42■□□□□ 0.38
GSE1-202ENST00000393243 FGD1P98174 961 aa17.41■□□□□ 0.38
GSE1-202ENST00000393243 SOX12O15370 315 aa17.4■□□□□ 0.38
GSE1-202ENST00000393243 CFAP53Q96M91 514 aa17.4■□□□□ 0.38
GSE1-202ENST00000393243 CHMP7Q8WUX9 453 aaPredicted RBP17.4■□□□□ 0.38
GSE1-202ENST00000393243 CLSTN1O94985 981 aa17.39■□□□□ 0.37
GSE1-202ENST00000393243 NOP58Q9Y2X3 529 aaKnown RBP17.38■□□□□ 0.37
GSE1-202ENST00000393243 KCNJ4P48050 445 aa17.38■□□□□ 0.37
GSE1-202ENST00000393243 U2SURPO15042 1029 aaKnown RBP17.37■□□□□ 0.37
GSE1-202ENST00000393243 ERICH6BQ5W0A0 696 aa17.37■□□□□ 0.37
GSE1-202ENST00000393243 DCAF1Q9Y4B6 1507 aa17.37■□□□□ 0.37
GSE1-202ENST00000393243 CARD11Q9BXL7 1154 aa17.37■□□□□ 0.37
GSE1-202ENST00000393243 MAPK8IP3Q9UPT6 1336 aa17.36■□□□□ 0.37
GSE1-202ENST00000393243 SIN3AQ96ST3 1273 aa17.33■□□□□ 0.36
GSE1-202ENST00000393243 APBB1O00213 710 aa17.31■□□□□ 0.36
GSE1-202ENST00000393243 DRC7Q8IY82 874 aa17.3■□□□□ 0.36
GSE1-202ENST00000393243 ISY1Q9ULR0 285 aaKnown RBP17.29■□□□□ 0.36
GSE1-202ENST00000393243 GOLGA2Q08379 1002 aa17.28■□□□□ 0.36
GSE1-202ENST00000393243 POGKQ9P215 609 aa17.28■□□□□ 0.36
GSE1-202ENST00000393243 PPP4R2Q9NY27 417 aa17.27■□□□□ 0.36
GSE1-202ENST00000393243 GOLGA6L6A8MZA4 724 aa17.26■□□□□ 0.35
GSE1-202ENST00000393243 GOLGA6L4A6NEF3 574 aa17.26■□□□□ 0.35
GSE1-202ENST00000393243 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.26■□□□□ 0.35
GSE1-202ENST00000393243 SAFB2Q14151 953 aaKnown RBP eCLIP17.25■□□□□ 0.352e-7■□□□□ 9.6
GSE1-202ENST00000393243 CLIP1P30622 1438 aa17.25■□□□□ 0.35
GSE1-202ENST00000393243 DEKP35659 375 aaKnown RBP17.25■□□□□ 0.35
GSE1-202ENST00000393243 GZF1Q9H116 711 aaPredicted RBP17.25■□□□□ 0.35
GSE1-202ENST00000393243 ZCCHC6Q5VYS8 1495 aaKnown RBP17.24■□□□□ 0.35
GSE1-202ENST00000393243 MSNP26038 577 aaKnown RBP17.23■□□□□ 0.35
GSE1-202ENST00000393243 HSCBQ8IWL3 235 aa17.23■□□□□ 0.35
GSE1-202ENST00000393243 NUDCQ9Y266 331 aa17.21■□□□□ 0.35
GSE1-202ENST00000393243 PLEKHD1A6NEE1 506 aa17.2■□□□□ 0.34
GSE1-202ENST00000393243 PDE4CQ08493 712 aa17.2■□□□□ 0.34
GSE1-202ENST00000393243 CHAF1AQ13111 956 aaPredicted RBP17.18■□□□□ 0.34
GSE1-202ENST00000393243 CDCA8Q53HL2 280 aa17.17■□□□□ 0.34
GSE1-202ENST00000393243 CFDP1Q9UEE9 299 aaPredicted RBP17.17■□□□□ 0.34
GSE1-202ENST00000393243 ANO8Q9HCE9 1232 aaPredicted RBP17.17■□□□□ 0.34
GSE1-202ENST00000393243 MYO15BQ96JP2 1530 aa17.17■□□□□ 0.34
GSE1-202ENST00000393243 MLECQ14165 292 aa17.14■□□□□ 0.34
GSE1-202ENST00000393243 GNL2Q13823 731 aaKnown RBP17.14■□□□□ 0.33
GSE1-202ENST00000393243 NRDCO43847 1150 aa17.13■□□□□ 0.33
GSE1-202ENST00000393243 ZNF330Q9Y3S2 320 aaPredicted RBP17.13■□□□□ 0.33
GSE1-202ENST00000393243 SLKQ9H2G2 1235 aaPredicted RBP17.13■□□□□ 0.33
GSE1-202ENST00000393243 DCAF11Q8TEB1 546 aa17.11■□□□□ 0.33
GSE1-202ENST00000393243 SRPK2P78362 688 aaKnown RBP17.1■□□□□ 0.33
GSE1-202ENST00000393243 FOXD4L1Q9NU39 408 aa17.09■□□□□ 0.33
GSE1-202ENST00000393243 STK26Q9P289 416 aa17.09■□□□□ 0.33
GSE1-202ENST00000393243 RBM19Q9Y4C8 960 aaKnown RBP17.08■□□□□ 0.33
GSE1-202ENST00000393243 CEP162Q5TB80 1403 aa17.07■□□□□ 0.32
GSE1-202ENST00000393243 MCCP23508 829 aa17.07■□□□□ 0.32
GSE1-202ENST00000393243 PNNQ9H307 717 aaKnown RBP17.06■□□□□ 0.32
GSE1-202ENST00000393243 NOL8Q76FK4 1167 aaKnown RBP17.06■□□□□ 0.32
GSE1-202ENST00000393243 RSF1Q96T23 1441 aaPredicted RBP17.05■□□□□ 0.32
GSE1-202ENST00000393243 L1TD1Q5T7N2 865 aaKnown RBP17.05■□□□□ 0.32
GSE1-202ENST00000393243 NOC3LQ8WTT2 800 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms