RNA–Protein interactions for RNA: ENST00000391901.7

ZNF541-203, Transcript of zinc finger protein 541, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ZNF541, Length 4,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-203ENST00000391901 WIZO95785 1651 aa19.71■□□□□ 0.75
ZNF541-203ENST00000391901 SALL2Q9Y467 1007 aaPredicted RBP19.7■□□□□ 0.74
ZNF541-203ENST00000391901 CANXP27824 592 aaKnown RBP19.69■□□□□ 0.74
ZNF541-203ENST00000391901 ANP32EQ9BTT0 268 aa19.68■□□□□ 0.74
ZNF541-203ENST00000391901 EIF4G2P78344 907 aaKnown RBP eCLIP19.67■□□□□ 0.74
ZNF541-203ENST00000391901 SIN3AQ96ST3 1273 aa19.66■□□□□ 0.74
ZNF541-203ENST00000391901 MRS2Q9HD23 443 aa19.66■□□□□ 0.74
ZNF541-203ENST00000391901 CFDP1Q9UEE9 299 aaPredicted RBP19.66■□□□□ 0.74
ZNF541-203ENST00000391901 TMC1Q8TDI8 760 aa19.65■□□□□ 0.74
ZNF541-203ENST00000391901 EIF5BO60841 1220 aaKnown RBP19.64■□□□□ 0.74
ZNF541-203ENST00000391901 ESF1Q9H501 851 aaKnown RBP19.63■□□□□ 0.73
ZNF541-203ENST00000391901 STAG3Q9UJ98 1225 aa19.63■□□□□ 0.73
ZNF541-203ENST00000391901 NEFMP07197 916 aa19.62■□□□□ 0.73
ZNF541-203ENST00000391901 CCNB3Q8WWL7 1395 aa19.62■□□□□ 0.73
ZNF541-203ENST00000391901 KANK4Q5T7N3 995 aaPredicted RBP19.61■□□□□ 0.73
ZNF541-203ENST00000391901 VPS8Q8N3P4 1428 aa19.6■□□□□ 0.73
ZNF541-203ENST00000391901 SMARCA2P51531 1590 aa19.59■□□□□ 0.73
ZNF541-203ENST00000391901 TOP2AP11388 1531 aaKnown RBP19.58■□□□□ 0.73
ZNF541-203ENST00000391901 SLC24A1O60721 1099 aa19.58■□□□□ 0.72
ZNF541-203ENST00000391901 RGL3Q3MIN7 710 aa19.57■□□□□ 0.72
ZNF541-203ENST00000391901 FHAD1B1AJZ9 1412 aa19.56■□□□□ 0.72
ZNF541-203ENST00000391901 PLPPR3Q6T4P5 718 aa19.55■□□□□ 0.72
ZNF541-203ENST00000391901 ZBTB47Q9UFB7 747 aaPredicted RBP19.53■□□□□ 0.72
ZNF541-203ENST00000391901 ERCC6Q03468 1493 aa19.52■□□□□ 0.72
ZNF541-203ENST00000391901 IRX6P78412 446 aaPredicted RBP19.5■□□□□ 0.71
ZNF541-203ENST00000391901 TDRD9Q8NDG6 1382 aaKnown RBP19.5■□□□□ 0.71
ZNF541-203ENST00000391901 NPM2Q86SE8 214 aaKnown RBP19.48■□□□□ 0.71
ZNF541-203ENST00000391901 SENP3Q9H4L4 574 aaPredicted RBP19.47■□□□□ 0.71
ZNF541-203ENST00000391901 ATAD2BQ9ULI0 1458 aa19.47■□□□□ 0.71
ZNF541-203ENST00000391901 ANP32AP39687 249 aaKnown RBP19.47■□□□□ 0.71
ZNF541-203ENST00000391901 EIF4G1Q04637 1599 aaKnown RBP19.46■□□□□ 0.71
ZNF541-203ENST00000391901 SENP3-EIF4A1A0A087X0R7 540 aa19.44■□□□□ 0.7
ZNF541-203ENST00000391901 RUSC2Q8N2Y8 1516 aa19.42■□□□□ 0.7
ZNF541-203ENST00000391901 CCDC136Q96JN2 1154 aa19.42■□□□□ 0.7
ZNF541-203ENST00000391901 WDR43Q15061 677 aaKnown RBP eCLIP19.42■□□□□ 0.7
ZNF541-203ENST00000391901 SMARCA4P51532 1647 aa19.41■□□□□ 0.7
ZNF541-203ENST00000391901 CADPSQ9ULU8 1353 aa19.41■□□□□ 0.7
ZNF541-203ENST00000391901 CARD11Q9BXL7 1154 aa19.39■□□□□ 0.69
ZNF541-203ENST00000391901 RAPGEF2Q9Y4G8 1499 aa19.38■□□□□ 0.69
ZNF541-203ENST00000391901 PDS5BQ9NTI5 1447 aa19.36■□□□□ 0.69
ZNF541-203ENST00000391901 SETD5Q9C0A6 1442 aa19.35■□□□□ 0.69
ZNF541-203ENST00000391901 GLIPR1L2Q4G1C9 344 aa19.32■□□□□ 0.68
ZNF541-203ENST00000391901 ARHGAP35Q9NRY4 1499 aa19.31■□□□□ 0.68
ZNF541-203ENST00000391901 RAB3GAP2Q9H2M9 1393 aa19.29■□□□□ 0.68
ZNF541-203ENST00000391901 FOXD1Q16676 465 aa19.28■□□□□ 0.68
ZNF541-203ENST00000391901 TIMELESSQ9UNS1 1208 aa19.28■□□□□ 0.68
ZNF541-203ENST00000391901 SUPT16HQ9Y5B9 1047 aaKnown RBP19.27■□□□□ 0.67
ZNF541-203ENST00000391901 FHOD3Q2V2M9 1422 aa19.26■□□□□ 0.67
ZNF541-203ENST00000391901 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.25■□□□□ 0.67
ZNF541-203ENST00000391901 FMN1Q68DA7 1419 aa19.25■□□□□ 0.67
ZNF541-203ENST00000391901 NBR1Q14596 966 aa19.24■□□□□ 0.67
ZNF541-203ENST00000391901 DCAF11Q8TEB1 546 aa19.24■□□□□ 0.67
ZNF541-203ENST00000391901 KNSTRNQ9Y448 316 aa19.22■□□□□ 0.67
ZNF541-203ENST00000391901 PPP1R15AO75807 674 aaPredicted RBP19.2■□□□□ 0.66
ZNF541-203ENST00000391901 PKD2Q13563 968 aa19.19■□□□□ 0.66
ZNF541-203ENST00000391901 CDCA8Q53HL2 280 aa19.17■□□□□ 0.66
ZNF541-203ENST00000391901 HSPA5P11021 654 aaKnown RBP19.17■□□□□ 0.66
ZNF541-203ENST00000391901 MPHOSPH9Q99550 1183 aa19.15■□□□□ 0.66
ZNF541-203ENST00000391901 CARMIL2Q6F5E8 1435 aa19.15■□□□□ 0.66
ZNF541-203ENST00000391901 UPF2Q9HAU5 1272 aaKnown RBP19.13■□□□□ 0.65
ZNF541-203ENST00000391901 FANCD2Q9BXW9 1451 aa19.12■□□□□ 0.65
ZNF541-203ENST00000391901 CC2D1BQ5T0F9 858 aaKnown RBP19.11■□□□□ 0.65
ZNF541-203ENST00000391901 ARID4BQ4LE39 1312 aaPredicted RBP19.08■□□□□ 0.65
ZNF541-203ENST00000391901 NEUROD2Q15784 382 aa19.07■□□□□ 0.64
ZNF541-203ENST00000391901 PLEKHG5O94827 1062 aa19.07■□□□□ 0.64
ZNF541-203ENST00000391901 HSP90AA1P07900 732 aaKnown RBP19.07■□□□□ 0.64
ZNF541-203ENST00000391901 IGF1RP08069 1367 aa19.06■□□□□ 0.64
ZNF541-203ENST00000391901 NUP155O75694 1391 aa19.06■□□□□ 0.64
ZNF541-203ENST00000391901 PPM1GO15355 546 aaPredicted RBP19.06■□□□□ 0.64
ZNF541-203ENST00000391901 JPH4Q96JJ6 628 aa19.06■□□□□ 0.64
ZNF541-203ENST00000391901 TNNT2P45379 298 aaPredicted RBP19.05■□□□□ 0.64
ZNF541-203ENST00000391901 CFAP53Q96M91 514 aa19.05■□□□□ 0.64
ZNF541-203ENST00000391901 CCER2I3L3R5 266 aa19.04■□□□□ 0.64
ZNF541-203ENST00000391901 L3MBTL2Q969R5 705 aa19.04■□□□□ 0.64
ZNF541-203ENST00000391901 DHX57Q6P158 1386 aaKnown RBP19.03■□□□□ 0.64
ZNF541-203ENST00000391901 TMF1P82094 1093 aa19.03■□□□□ 0.64
ZNF541-203ENST00000391901 HNRNPMP52272 730 aaKnown RBP eCLIP19.01■□□□□ 0.63
ZNF541-203ENST00000391901 GGT6Q6P531 493 aa19.01■□□□□ 0.63
ZNF541-203ENST00000391901 POGKQ9P215 609 aa19.01■□□□□ 0.63
ZNF541-203ENST00000391901 C14orf37Q86TY3 774 aa19■□□□□ 0.63
ZNF541-203ENST00000391901 RTN4Q9NQC3 1192 aaKnown RBP19■□□□□ 0.63
ZNF541-203ENST00000391901 ANKRD30AQ9BXX3 1397 aa19■□□□□ 0.63
ZNF541-203ENST00000391901 EFCAB2Q5VUJ9 269 aa19■□□□□ 0.63
ZNF541-203ENST00000391901 FGD5Q6ZNL6 1462 aa18.99■□□□□ 0.63
ZNF541-203ENST00000391901 PPP4R2Q9NY27 417 aa18.99■□□□□ 0.63
ZNF541-203ENST00000391901 KANK1Q14678 1352 aa18.97■□□□□ 0.63
ZNF541-203ENST00000391901 NCAPD3P42695 1498 aa18.97■□□□□ 0.63
ZNF541-203ENST00000391901 ZBTB7CA1YPR0 619 aa18.97■□□□□ 0.63
ZNF541-203ENST00000391901 RAD54L2Q9Y4B4 1467 aa18.97■□□□□ 0.63
ZNF541-203ENST00000391901 B4GALNT3Q6L9W6 998 aa18.95■□□□□ 0.62
ZNF541-203ENST00000391901 MLECQ14165 292 aa18.95■□□□□ 0.62
ZNF541-203ENST00000391901 SAFB2Q14151 953 aaKnown RBP eCLIP18.93■□□□□ 0.62
ZNF541-203ENST00000391901 CCDC18Q5T9S5 1454 aa18.93■□□□□ 0.62
ZNF541-203ENST00000391901 PRKCSHP14314 528 aaPredicted RBP18.92■□□□□ 0.62
ZNF541-203ENST00000391901 DEKP35659 375 aaKnown RBP18.91■□□□□ 0.62
ZNF541-203ENST00000391901 RBM19Q9Y4C8 960 aaKnown RBP18.9■□□□□ 0.62
ZNF541-203ENST00000391901 MYH16Q9H6N6 1097 aa18.89■□□□□ 0.61
ZNF541-203ENST00000391901 NUDCQ9Y266 331 aa18.89■□□□□ 0.61
ZNF541-203ENST00000391901 MAPK8IP3Q9UPT6 1336 aa18.88■□□□□ 0.61
ZNF541-203ENST00000391901 U2SURPO15042 1029 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms